Agelaius tricolor (tricolored blackbird): 139586329
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Entry
139586329 CDS
T10815
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139586329
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Gene silencing
Transposable elements
139586329
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
RelB-like
CDC45
Motif
Other DBs
NCBI-GeneID:
139586329
NCBI-ProteinID:
XP_071275726
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MSHAVLLLRRLRHRHRERNRDSDEEQDCDREQDCDRDREQDCDRDREQHRERDEPHERDR
DEPHERSRDQCRAHDRHPAPTRISLPTPLAAPPSPIPRRGRRRRRPYPAQRIYRVRCSFL
ELSDEQALRRCRLDRAAIAALCRELGADLQSLTGRSHALPVAVKVTSALAFLASGSFQTA
SRLSTGISQSAMSNCLAQFLAALQRRAGRYIAFPPPPAPPGDAPALPGVLGLVGAMHVAL
RAPADNEPLFRNAANFHSINMQVVCDRQGHITNVVAKFPGSCANATVLENSALARLMEGS
RPEGVWLLGDGSYPLKPWLLTPIAGPRGAAELRYNALHSRTLAPLRRTLGLLRRRFRCLA
GGGLQYSPPKVCQIFLACCILHNIALRRRVPLEPPEGLPPAPGHPEPPPQPPPPPGPGAR
EGRAVRARVVQQVREGMG
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgcggtgctgctgctgcggcggctccggcaccggcaccgggaacggaaccgg
gacagcgacgaggaacaggactgcgaccgagagcaggactgtgacagagaccgggagcag
gactgcgacagagaccgggagcagcaccgggagcgggatgaaccccacgaacgggaccgg
gatgaaccccacgaacggtcccgcgatcagtgccgcgctcatgaccggcaccccgcaccc
acccggatctccctccccactcccctcgctgctcccccatccccgataccccgccgcggc
cgccgccgccgccgcccgtacccagcccaacgcatttaccgggtgcgctgctccttcctg
gagctgagcgacgagcaggcgctgcggcgctgccgcctggaccgtgcggccatcgcggcg
ctgtgccgggagctcggtgccgaccttcagagcctcacaggccgcagccacgctctgccc
gtggccgtcaaagtcacctcggccttggccttcctggcctcgggctccttccagacggcg
tcgcgcctcagcacgggcatcagccagtcggccatgtccaactgcctggcgcagttcctg
gcggccttgcagcggcgggcgggccgctacatcgccttccccccgccgcccgcgcctccc
ggggacgccccggcgctgcccggggttctgggcttggtgggcgccatgcacgtggcgctg
agggcaccggccgataacgagcccctgttccggaacgccgccaacttccactccatcaac
atgcaggtggtgtgcgaccgccagggccacatcaccaacgtggtggccaagttccccggc
tcgtgcgccaatgccaccgtgctggagaactcggccctggcgcgcctgatggagggcagc
aggcccgagggggtctggctgctgggtgatggctcgtacccgctgaagccgtggctgctg
acgcccatcgcgggcccacggggcgcggccgagctgcgctacaacgcgctgcactcgcgc
actctggccccgctgcgccgcacgctggggctgctgcgccgccgcttccgctgcctggcg
ggcggggggctccagtacagcccccccaaggtctgccagatcttcctggcctgctgcatc
ctgcacaacatcgccctgcgccgccgcgtccccctggagccccccgaggggctcccgccc
gcccccggccaccccgagccgcccccgcagccaccgccgcccccggggccgggggctcga
gaggggcgggcggtgagggccagggtggtgcagcaggtcagggaggggatgggctga
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