Agelaius tricolor (tricolored blackbird): 139586343
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Entry
139586343 CDS
T10815
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139586343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139586343
Spliceosome [BR:
atrc03041
]
Complex A
Other components
Complex A specific factors
139586343
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
139586343
NCBI-ProteinID:
XP_071275742
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MATGASAAQPGPAPGPAAPRAPMAAAAFPFAALPPPPPPPPPPPPPPQPQPPAQPPPPPP
SQAPGGPAAPQPPGGPAAPQPPPAAPYGQFRFPSPPPGHDPPAAPAGAPPAAPAAPPQPA
GAPQQPRPEEGAGGAGTGPGDAGGRAGAAHKPRRADFPRKRKRSRWNQDSLEQKTVIPGM
PTVIPPGLTREQERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNT
REFRTRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLL
IGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVK
KAVEQIRNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQSTETRSITNT
TVCTKCGGAGHIASDCKFARPGDPQSAQDKARMDKEYLSLMAELGEAPVSVSSNAAHNNS
PLSSSHRAASQAGGQPPPSRPPWMSSAPSENRPYHGLHGGGPGGPGGPHSFPHPMAGMGG
GHGGHPLQHTPNGPPPWMQPHHPPMGGGPHPPGHPGPHHMDQYLGNAPVGSGVYRLHQGK
GMMPPPLGMLPPPPPPPGGQPXPPPSGPLPPWQQQPPPPPSSSSTPLPWQQNTTTTTSAG
SASLPPWQQQAGGGAAGGGAASSGAPPLPGSPSMVPLPPGVQPPLPPGAPPXPPPPPPGS
GGLMYAPPPPPPPPPMDPSNFVTMMGMGVPALPPFGMPPAPPPPPPQN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggggcgagcgcggcccagcccggccccgctcccggccccgccgccccccgc
gcccccatggccgccgccgctttccctttcgcggctctgccgcctcctccgcctcctcct
ccgccgcctccgccacctccgcagccgcagccaccggcgcagccgccgccgcctccgcct
tcgcaggccccaggcggccccgcggccccgcagcctccgggcggccccgcggcccctcag
ccgccgcccgccgctccctacgggcaattccgcttcccgtcgccgccgcccggccatgac
ccgcccgcggcccccgcgggggctccgccggccgcccccgccgctcccccgcagcccgcg
ggggctccgcagcagccgcggcccgaggagggcgcggggggcgcgggcaccgggccggga
gatgcgggcggacgggcgggagccgcgcacaagccccggagggcagacttcccgcggaag
cggaagcgcagccgctggaaccaggactcgctggagcagaagacggtgatcccggggatg
cccacggtgatcccgcccgggctgacgcgcgagcaggagcgcgcctacatcgtgcaactg
cagatcgaagacctgacccgcaaactgcgcacgggagacctgggcatcccccctaacccc
gaggacaggtccccctccccggagcccatctacaacagcgaggggaagcgcctgaacacg
cgggagttccgcacgcgcaagaagctggaggaggagaggcacaacctcatcaccgagatg
gtggccctgaaccccgacttcaagcccccagctgactacaagccaccggcgacgcgggtg
agcgacaaggtgatgatcccgcaggatgagtaccccgagatcaacttcgtggggctcctc
atcgggcccagggggaacactctgaagaacatcgagaaggagtgcaatgccaagatcatg
atcaggggcaagggctcggtcaaggagggcaaggtcggccgcaaggacgggcagatgctg
ccgggcgaggacgagcccctgcacgccctcgtcaccgccaacaccatggagaacgtcaag
aaagccgtggagcagatcaggaacatcctgaagcagggcatcgagacccccgaggaccag
aacgacctgcgcaagatgcagctgcgggagctggcgcggctcaacgggaccctgcgggag
gatgacaatcgcatcctgaggccgtggcagagcaccgagactcgcagcatcaccaacacc
acggtgtgcaccaagtgcggcggggccgggcacatcgcctccgactgcaagtttgccagg
cctggggacccccagtctgcacaggacaaggctcggatggacaaggagtacctgtccctg
atggccgagctgggcgaggccccggtgtccgtgagctccaacgccgcccacaacaacagc
cccttgtccagcagccaccgtgcagccagccaggctggggggcagccccccccgagccgc
cccccctggatgagctcagcgccctccgagaaccgtccctaccatgggctgcacgggggg
ggcccgggggggcccgggggtccccacagcttcccccaccccatggctggcatggggggg
gggcacggggggcaccccctgcagcacaccccgaatgggccccccccgtggatgcagccc
caccacccccccatggggggggggccgcacccccccggccaccccggcccccaccacatg
gatcagtacctgggaaatgcgccggtgggctctggggtctatcgcctgcaccagggaaaa
ggtatgatgccaccaccgctgggtatgctgcccccgccgccccccccgcccggtgggcag
ccgnncccccccccctccgggcccctccctccctggcagcagcagccgccgccgcccccc
agcagcagcagcacccccttgccctggcagcaaaatacgacgaccaccacgagcgctggc
agcgcctccctccctccctggcagcagcaggcgggggggggtgcggcgggggggggggcg
gcttcttcgggggcccccccgctccccggcagcccctccatggtgcctttgccccccggg
gttcagcccccgctgccccccggggcccccccgnncccccccccgccccctcctggctcc
gggggcctgatgtacgcgccccccccccccccgccgcccccccccatggacccttctaat
ttcgtcaccatgatgggcatgggggtgcccgccctgccccccttcggcatgccccccgcg
ccccccccgccgcccccccagaactga
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