Agelaius tricolor (tricolored blackbird): 139586450
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Entry
139586450 CDS
T10815
Symbol
DPF2
Name
(RefSeq) zinc finger protein ubi-d4 isoform X1
KO
K13196
zinc finger protein ubi-d4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139586450 (DPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139586450 (DPF2)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139586450 (DPF2)
Spliceosome [BR:
atrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
139586450 (DPF2)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
139586450 (DPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
Lectin_C
Motif
Other DBs
NCBI-GeneID:
139586450
NCBI-ProteinID:
XP_071275932
LinkDB
All DBs
Position
Unknown
AA seq
651 aa
AA seq
DB search
MAAVVQNVVKLLGEQYYRDAMEQCHSYNARLCAERSVRLPFLDSQTGVAQSNCYIWMEKR
HRGPGLAAGQLYSYPARRWRKKRRAHPPEDPRLSFPSIKPDAEQALKKEGLLGQDGSSLE
ALLRTDPLEKRALPDPRMDDDSLGEFPVTNSRARKRILEPDDFLDDLDDEDYEEDTPKRR
GKGKAKGKGVGGARKKLDAAILEDRDKPYACDNSYKQKHSLKPPDRGSSALSLLVFPAFP
PFFSPPLFFSHLPKKDKKKKRPKFPCGAAGWAGGGGGGGRGQRPRQRRQRRPRSGPPDPF
PAGNGAGKTKIKWTPLGASDGKNAELAPQSWSLDPNPGVWTKILEFAPKSQSLDPNSGVC
APIPEFAPKSQSLDQNPGVCTQILEFAPQIPEFAPQILEFAPQILEFAPQSRSWCPNPGV
CTQIPEFAPKSRSLHPNPRVCTQIPEFAPKSRSLHPNPGVCAPIPELAPKSWSLDPNPRV
WTQIPEFPPQSRSLRPNPGVCAPNSAVSTPNPGVCTQIPEFGPKFQRFPPKSQSFHPKFC
SFHLSPGVCTPIPEFAPKSQSLDPNPGVWTQIPEFPPQSRSLRPNPGVCAPNSAVSTPNP
RVWTQILQFPPQSQSLHPNSAVSTPIPNPNSSGSSSPRPNGAGKGFWGVLG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggttcagaatgtggtcaagctgctgggcgagcagtactaccgggacgcc
atggagcagtgccacagctacaacgcgcggctctgcgccgagcgcagcgtgcgcctgccc
ttcctggactcgcagaccggcgtggcccagagcaactgctacatctggatggagaaacgg
caccgcgggcccggtttggcagccgggcagctctactcgtaccccgcgcggcgctggcgc
aagaaacgccgcgcccaccccccggaggacccccggctctccttcccctccatcaaaccc
gacgcggagcaggccctgaagaaggaggggctgctggggcaggacgggagcagcctggag
gcgctgctcaggacggatcccctggagaagcgcgccctgcccgacccgcgcatggacgac
gacagcctgggcgagttcccggtcaccaacagccgcgcgcggaagcggatcctggagccg
gacgatttcctggacgatttggacgatgaggattacgaggaggacacgcccaagcggagg
gggaagggcaaggccaagggaaaaggcgtcgggggggctcggaagaagctggacgctgcc
atcctggaggacagggacaagccctacgcctgtgacaacagttacaaacaaaagcattcc
ttgaaacctcccgaccgaggtagttccgctctctctctgctcgtttttcctgcttttcct
ccttttttttccccccccctttttttttcccacctcccaaaaaaggataaaaaaaaaaaa
aggcccaaattcccctgtggagccgcggggtgggcgggaggaggaggaggaggagggaga
ggccaaaggccacggcagcgacgtcagcgccggccccgctcgggcccccctgaccctttt
ccagcagggaacggggccgggaaaacaaagattaaatggaccccccttggagccagcgat
gggaaaaacgcggagctggcgccccagtcctggagtttggacccaaatcccggagtttgg
accaaaatcctggagtttgcacccaaatcccagagcttggacccaaattctggagtttgc
gccccaatcccggagtttgcacccaaatcccagagtttggaccaaaatcctggagtttgc
acccaaatcctggagtttgcaccccaaatcccggagtttgcaccccaaatcctggagttt
gcaccccaaatcctggagtttgcgccccaatcccggagctggtgccccaatcccggagtt
tgcacccaaatcccagagtttgcacccaaatcccggagtttgcacccaaatcccagagtt
tgcacccaaatcccggagtttgcacccaaatcccggagtttgcacccaaatcccggagtt
tgcgccccaatcccggagcttgcgcccaaatcctggagtttggacccaaatcccagagtt
tggacccaaatcccggagtttccaccccaatcccggagtttgcgcccaaatcccggagtt
tgcgccccaaattctgcagtttccaccccaaatcccggagtttgcacccaaatcccagag
tttggacccaaattccagaggttcccccctaaatcccagagcttccaccccaaattctgc
agtttccacctcagtcctggagtttgcaccccaatcccggagtttgcacccaaatcccag
agtttggacccaaatcccggagtttggacccaaatcccggagtttccaccccaatcccgg
agtttgcgcccaaatcctggagtttgcgccccaaattctgcagtttccaccccaaatccc
agagtttggacccaaattctgcagtttccaccccagtcccagagtttgcacccaaattcc
gcagtttccaccccaatcccaaatcccaattcctctggctcgtcctccccacgcccaaac
ggggctggaaagggattttggggtgtccttggatga
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