Agelaius tricolor (tricolored blackbird): 139586494
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Entry
139586494 CDS
T10815
Symbol
SNRPD2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139586494 (SNRPD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139586494 (SNRPD2)
03032 DNA replication proteins [BR:
atrc03032
]
139586494 (SNRPD2)
Spliceosome [BR:
atrc03041
]
Complex A
U1 snRNP components
Sm proteins
139586494 (SNRPD2)
U2 snRNP components
139586494 (SNRPD2)
Complex B
U1 snRNP components
139586494 (SNRPD2)
U4/U6.U5 tri-snRNP components
139586494 (SNRPD2)
Complex C
U2 snRNP components
139586494 (SNRPD2)
DNA replication proteins [BR:
atrc03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
139586494 (SNRPD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Ldh_1_C
Motif
Other DBs
NCBI-GeneID:
139586494
NCBI-ProteinID:
XP_071276073
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgaacaagcccaagagcgagatgacgcccgaggagctgcagaagcgcgag
gaggaggagttcaacacgggcccgctgtcggtgctgacgcagagcgtcaagaacaacacc
caggtgctcatcaactgccgcaacaacaagaagctgctgggccgcgtcaaagccttcgac
aggcactgtaacatggtgctggagaacgtcaaggagatgtggacggaggtgcccaagagc
ggcaaaggcaagaagaaatccaagcccgtcaacaaggaccgctacatctccaagatgttc
ctgcgcggggactccgtcatcgtggtgctccgcaaccccctcatcgccggcaaatag
DBGET
integrated database retrieval system
