Agelaius tricolor (tricolored blackbird): 139586657
Help
Entry
139586657 CDS
T10815
Symbol
ACIN1
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03013
Nucleocytoplasmic transport
atrc03015
mRNA surveillance pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139586657 (ACIN1)
09122 Translation
03013 Nucleocytoplasmic transport
139586657 (ACIN1)
03015 mRNA surveillance pathway
139586657 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139586657 (ACIN1)
03041 Spliceosome [BR:
atrc03041
]
139586657 (ACIN1)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139586657 (ACIN1)
Spliceosome [BR:
atrc03041
]
Complex C
Other components
EJC/TREX
139586657 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
Motif
Other DBs
NCBI-GeneID:
139586657
NCBI-ProteinID:
XP_071276322
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MPPKSPKRARFGPPSSEPAPPMEPGAAPSPAPPEATPRGFKRKIAVLSARVSAEPEGGGA
GAGGPRKRRWGATAPKKPSISISTDSLKSLIPEIRAGGGAELLEGGGDGPALMGEGPEAE
GEGPDKGGVASSNSGPASGAGPPLPHPPSLLLPSPHLKICRTVTQVVPASVGENGRGEGQ
EEEEGEESDEGRGQDKPLPHPGQAPPTTATSMGGGGGAGTGPAPTPAAATPTSGEGEGKG
GEAPPPPRRSQGAPWRPGALLLPVDEPVRAAPRPSPPRQRPSPIVHLCNLVRPFTLGQLK
ELLGRTGRLKDDGFWIDRIKSHCFVTYCSVEEAVATREALHGVKWPQSNPKVLAADFAQQ
EELDFHRGLLAPPPSSSPSPLQPRPSPPFPPSSSSSSSLNPAHQGGVSPPGHAPRGAEPW
QWAERERERSRRERAREQREWDRGKSPAPSPGTRPPGGGATPGHAPREGRSGRTRPQGGG
DKEKGRGQREARPERKEKPPEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQLLQKQAERAA
RARERERRRKEQEEEELRQRQGGGASAAGGGAGAAGGGASSGANPAHSRPSGGGGAGARA
PPSGSRKRRSRSRSPRRR
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaaaagccccaaacgtgcccggtttggcccccccagctcggagccggcgccg
cccatggagccgggagccgcccccagccccgccccccccgaggccacgcccaggggcttc
aagaggaagattgcggtgctgtcagccagagtcagcgcggagccggaagggggcggggcc
ggcgcgggggggccccggaagcggcgctggggggcgacggcgcccaagaagccctcgatc
agcatcagcaccgactcgctcaagagcctcatccccgagatccgcgctgggggcggggcc
gagctgctggaggggggaggggacggccccgccctcatgggggaggggcctgaagccgaa
ggggaggggcccgacaaagggggcgtggcctcctccaactctggccccgcctccggggcg
gggccgcccctcccccaccccccctcgctgctgctcccctccccccacctgaagatctgc
aggactgtcactcaggtggtcccggcctccgtgggtgagaacgggcggggggaggggcag
gaggaagaggagggggaggagagcgacgaggggcggggccaggacaagcccctcccacac
ccgggacaggccccgcccaccacagccacatccatgggaggagggggaggggccggcaca
ggccccgcccccacccccgcagcggccacgcccacatcgggagagggggaggggaaagga
ggcgaggccccgcccccgccgcgccgctcccagggcgccccctggcggccgggggcgctg
ctgctccccgtggacgaacccgtgagggccgcgccccgcccctcccccccccgccagcgc
ccctcccccatcgtgcacctctgcaacctggtgcgtcccttcacgctggggcagctgaag
gagctgctgggccgcaccgggcgcctcaaggacgacggcttctggatcgaccgcatcaaa
tcccattgcttcgtcacgtattgctcggtggaggaggcggtggccacgcgggaggcgctg
cacggcgtcaaatggccccagtccaaccccaaggtgctggcggccgacttcgcccagcag
gaggagctcgatttccaccgcggcctcttggccccgcccccttcctcaagcccctcccct
ctccagccccgcccctcccctcctttccccccctcctcctcctcctcctcctcccttaac
cccgcccaccaagggggcgtgtccccgcccggccacgccccccggggggcggagccttgg
cagtgggcggagcgagagcgggaacgatcccggcgggaacgggcccgggaacagcgggaa
tgggacaggggcaaaagccccgcccccagccccgggacacgcccaccggggggcggggcc
acgccgggacacgccccccgagagggcaggagcggcaggacacgcccacaagggggcggg
gacaaggagaaggggcggggacaaagggaggcgcggcccgagaggaaagagaagcccccg
gaggagcccccggccaagctcttggacgatttgttccggaaaaccaaagcggcgccgtgc
atctattggctgccgctgaccgactcccagctgctgcagaagcaggcggagcgggcggcg
cgggcgcgggagcgcgagcggcgccggaaggagcaggaggaggaggagcttcggcagcgc
caggggggcggggccagcgccgcggggggcggggccggcgccgcggggggcggagcttcc
tcgggcgcaaaccccgcccactcgcggccctcaggagggggcggggccggggccagggcg
ccccccagtggatcccggaagcgccgcagccgcagccgcagcccccggaggcgctga
DBGET
integrated database retrieval system
