Agelaius tricolor (tricolored blackbird): 139586788
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Entry
139586788 CDS
T10815
Symbol
HCFC1
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1
KO
K14966
host cell factor 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03083
Polycomb repressive complex
atrc04980
Cobalamin transport and metabolism
atrc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
139586788 (HCFC1)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
139586788 (HCFC1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139586788 (HCFC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
atrc01009
]
139586788 (HCFC1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139586788 (HCFC1)
03029 Mitochondrial biogenesis [BR:
atrc03029
]
139586788 (HCFC1)
Protein phosphatases and associated proteins [BR:
atrc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
139586788 (HCFC1)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
139586788 (HCFC1)
HMT complexes
COMPASS/SET1 complex
139586788 (HCFC1)
MLL-HCF complex
139586788 (HCFC1)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
139586788 (HCFC1)
Mitochondrial biogenesis [BR:
atrc03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
139586788 (HCFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
139586788
NCBI-ProteinID:
XP_071276507
LinkDB
All DBs
Position
Unknown
AA seq
2297 aa
AA seq
DB search
MAGLGGGGSPPRAPPGPPALQPRWKRVVGWAGPVPRPRHGHRAVAIKELIVVFGGGNEGI
VDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQA
SRWEWKRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYV
LELRPGSGVLAWDIPITYGVLPPPRESHTAVVYTERDGRRSRLVIYGGMSGCRLGDLWTL
DIETLTWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNT
LACLNLDSMAWEPLVLETLEDNVPRARAGHCAVAIATRLYIWSGRDGYRKAWNNQVCCKD
LWYLETERPPAPGRVQLVRANTTSLEVSWGAVPTADSYLLQLQKYELPAAPAPPPVPSVP
ANPPKSPAPAAPAPPPAPPRPAPAGGRGAHPAAPARRAPQPARRHRCCRGDGGDGGGDGR
RGGGGTAGGVAAVAAAAGGTAGAVAAPPGATLQVLPAAGGATAAAAASGAATAGRAPGVP
AVLKVTGPPAASAGPPLVTVRSAGPGKAPVTVTSLPAGVRMVVPTQSPQGTVIGSSPQMS
GMAALAAAAAATQKIPPASAPTVLSVPAGATIVKTVAVTPGATTLPATVKVASSPVMVSN
PATRMLKTAAAQVGTAGASPAATNAATRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTIT
LVKSPISVPGGSALISNLGKVMSVVQTKPVQSSAVTGQASSGPVTQIIQTKGPLPAGTIL
KLVTSGEGKPTTILTSTQAGGGGGQAPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQS
GATGVTSSPGIKSPITIITTKVMTSGTGTPAKIITAVPKLGGGHGQQGVTQVVLKGAPGQ
PGTILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSTSLAGGAGGH
SATASLATPITTLGTIATLSSQVLNPAAITATAAGGGLGTPTITMQPVSQPTQVTLITTP
SGVEAQPVHDLPVSILASPTAEGPPAATSGGGGLAEPPPAEATPGTVTLVCSNPPCETHE
TGTTNTATTSLVANVGTGGQQLQLQLCEDTGGGTAVVAAPARACSNPPCETHETGTTNTP
TAAGTARLGTPGGPPCPTQQTAATGTTMTARLCPPEGGGGGGGGSGVTSCQTQEAAPCQT
PWGQPEVGTASGAVTAATTASCETPVGTRLCANPPCETHETGTTNTVTVTGSQLCSNPPC
ETHETGTTNTVTVTGSQLCSNPPCETHETGTTNTVTVTGTRLCANPPCETHETGTTSTVT
TMGTRFCSNPPCETHETGTTNTVTMTAPRPPCSNPPCETHETGTTNTVTTTGTRLCSNPP
CETHETGTTNTVTTTAPRPPCSNPPCETHETGTTNTVTTTGTRLCSNPPCETHETGTTNT
VTTTAPRPPCSNPPCETHETGTTNTVTMTAPRPPCSNPPCETHETGTTNTVTTTAPRPPC
SNPPCETHETGTTNTVTTTGTRFCSNPPCETHETGTTSTATTTTATSRPPPESGTAAAPP
PRGVPPCSNPPCETHETGTTNTVTMTSSQLCSNPPCETHETGTTNTATTATAGSRPGDTT
TATSAAATATSSTGGSPPCANPPCETPESGATSTAATRAGSSPCQSHQSGATSTATTTTE
GVTPPLPCATTTAATSPPRACSNPPCETHETGTTATATTVTASMGASQEPPPPAANGQGE
GETPPSEAGGPPVPPGTPSPPGPSGSGTPQPRAVTTVTQSTPAPGPAVPTISSLTESPPA
PPETPPTTTTTTTPTPPGDPHPSSQDPSSAASPSPPGPEAAAPAPAGAEPAGSPEPLAVV
VLPPPTAEGGPAEGLALPPELLAEAGGAGGPPGLTPEELAVTAAAEAAAAAAASEEAQAQ
ALAIQAVLQAAQQAVMGTSEPLEPGEPGGGPSELGGALGVSEGAGGAGGALPLVLTQQDL
AALVQHQQHLAEAAAPPPHLPTEALAPADSLNDPAGDTNGLGDLGAVPGGGTPATLLPPP
GDGLAPSSAFVAPPGPTVAPSPAKLQAAAALAEVANGIESTPVKPEPGAPPKALPKKENQ
WFDVGVIKGTTMMVTHYFLPPDDAAPADDDASGVPDHSQLRRQELQPGTAYKFRVAGLNA
CGRGPFSELSAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGRIAEYSVYLAIQG
GPGGGPERAGGGAQLAFMRVYCGPSPSCLVPASSLASAHIDHTTKPAIIFRIAARNDKGY
GPATQVRWLQGGSGALK
NT seq
6894 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcctgggcgggggggggtccccgccgcgggcccccccgggtccccccgcgctg
cagccgcgctggaagcgggtggtgggatgggctgggcccgtgccccggccccggcacggc
caccgagccgtggccatcaaggagctcatcgtggtcttcggggggggcaacgagggcatc
gtggacgagctgcacgtctacaacacagccaccaaccagtggttcatcccggccgtgcgg
ggggacatccccccgggctgtgccgcctacggcttcgtgtgtgacggcacgcggctgctg
gtgttcgggggcatggtggagtacggcaagtacagcaacgacctctacgagctgcaggcc
tccaggtgggagtggaagaggctgaaggcgaagacccccaaaaatgggccccccccttgc
ccccggctgggccacagcttctccctggtgggcaacaagtgttacctgtttggggggctg
gccaacgacagcgaggaccccaaaaacaacatcccacggtacctgaacgacctgtacgtg
ctggagctgcgcccaggctcgggggtgctggcctgggacatccccatcacttatggggtg
ctgccccctccccgggaatcccacacggccgtggtgtacacggagcgcgacgggcggcgc
tcgcgcctcgtcatctacgggggcatgagcggctgcaggctgggggacctgtggacgttg
gatattgagacgctgacctggaacaagcccagcctgagcggggtcgctcccctgccccgc
agcctccactcagccaccaccattggcaacaagatgtacgtttttggggggtgggtgccc
ctggtgatggatgacgtgaaggtggcgacgcacgagaaggagtggaaatgcaccaacacc
ctggcctgcctgaacctggactcgatggcctgggagcccctggtgctggagaccctggag
gacaacgttccgcgggctcgcgccgggcactgcgccgtggccatcgccacccgcctgtac
atctggagcggccgcgacggctaccgcaaggcctggaacaaccaggtgtgctgcaaggac
ctgtggtacctggagacagagcgcccgcccgcgccgggccgcgtgcagctggtgcgcgcc
aacaccacgtcgctggaggtgagctggggcgcggtgcccacggccgactcgtacctgctg
cagctgcagaagtacgagctgcccgccgcgcccgcgccgccgcccgtgccctcggtgccc
gccaacccccccaagagccccgcgcccgccgcgcccgcgccgccgcccgcgcccccccgc
cctgccccagctggggggcgtggggctcaccctgctgcccccgcccgccgcgccccccaa
cccgcccggcgtcaccgctgctgccgtggggacggcggggacggcggcggggacgggcgg
cggggcggtggtggcaccgccgggggggtggcggcggtggcggcggcggccggggggaca
gcgggggcggtggctgcgccccccggggccaccctgcaggtgctgcccgcggccgggggg
gcaacggcggcggcggcggcgagcggagcggccacggcggggagggcacccggtgtccca
gcggtgctgaaggtgaccggtccccctgcggccagcgcggggccgccgttggtcaccgtg
cgctcggccgggcccggcaaggccccggtgacggtgacatcgctgcccgccggcgtcagg
atggtggtgcccacccagagcccccagggcacggtgatcggcagcagcccccagatgagc
ggcatggccgctctggccgcagcagccgcggccacccagaaaatccccccggcctcggcg
cccaccgtgctcagcgtccccgccggggccaccatcgtcaagacggtggccgtgacccct
ggggccaccaccctgcccgccaccgtcaaggtggcctcgtcacctgtcatggtgagcaac
cctgccacgcgcatgctgaagacggcggccgcccaggtgggcacggcgggggcgtcacct
gcggccaccaacgcggccaccaggcccatcatcaccgtgcacaagtcggggacggtgacg
gtggcccagcaggcccaggtggtcaccaccgtggtcggaggggtcaccaagaccatcacg
ctggtcaagagccccatctccgtgccggggggcagcgccctgatctccaacctgggcaag
gtgatgtcggtggtgcagacaaaacccgtgcagagctcggctgtcaccgggcaggcctcg
agtggtcctgtcacccagatcatccagaccaagggccccctgcccgcggggaccatcctg
aagctggtgacgtcgggggaggggaagcccaccaccatcctgaccagcacgcaggcgggg
ggcgggggcggccaagcccccaccatcctgggcatcagcagcgtcagccccagcaccacc
aagcccggcaccaccaccatcatcaaaaccatccccatgtcggccatcatcacccagtcg
ggggctaccggtgtcaccagcagccctgggatcaagtcccccatcaccatcatcaccacc
aaggtgatgacctcgggcaccgggacccccgccaagatcatcacggctgtccccaagctg
ggcggggggcacggccagcagggcgtgacacaggtggtgctgaagggagccccgggccag
ccggggaccatcctgaggacggtgcccatggggggggtccggctggtcacccccgtcacc
gtctcggccgtcaagcccacggtgaccaccctggtggtcaagggcaccaccggtgtgacc
acgctggggacggtgacagggacggtgtccaccagcctggccggaggggccggtggccac
agcgccacggcctcgctggccacacccatcaccaccctggggacaatcgccaccctgtcc
agccaggtgctgaaccctgcggccatcacggccaccgcggccgggggcggcctggggaca
ccgaccatcaccatgcagccggtgtcccagcccacgcaggtgacgctgatcaccacgccc
agcggcgtggaggcccagcccgtccacgacctccccgtgtccatcctggcgtcccccacg
gccgaaggtccccccgcggccacctcggggggtggcggcctggccgagccccccccggcc
gaggccacccctggcaccgtcaccctggtgtgctccaacccgccctgcgagacccacgag
acggggaccaccaacacggccaccaccagcctggtggccaacgtggggacagggggacag
cagctgcagctgcagctctgcgaggacacgggcggggggacagcggtggtggcggcgcca
gcccgggcctgctccaacccgccctgcgagacccacgagacggggaccaccaacaccccc
acggcggcggggacggcgcgcttggggacgccggggggaccgccctgccccacgcagcag
acggcggccacggggacaacgatgacggcgcggttgtgtccccccgaaggtggcggtggt
ggcggtggtggcagcggtgtcacctcgtgccaaacgcaggaggcagccccgtgccaaacg
ccctggggacagcctgaggtggggacggccagcggggcggtcactgcggccaccacggcg
agctgtgagacccccgtggggacacggctgtgtgccaaccccccctgcgagacccacgag
acagggacaaccaacacggtgacagtgacagggtcacagctctgctccaacccgccctgt
gagacccacgagacggggacaaccaacacggtgacagtgacagggtcacagctctgctcc
aacccgccctgtgagacccacgagacggggacaaccaacacggtgacagtgacagggaca
cggctgtgtgccaacccgccctgcgagacccacgagacagggacaaccagcacggtgaca
accatggggacacggttctgctctaacccaccctgtgagacccacgagacggggacaacc
aacacggtgacaatgacagcaccgaggccaccatgctctaatcctccttgtgagacccac
gagacggggacaaccaacacggtgacaaccacggggacacggctgtgctccaaccctcct
tgtgaaactcatgagacggggacaaccaacacggtgacaacgacagcaccgaggccaccc
tgctctaatcctccttgtgagacccacgagacagggacaaccaacacggtgacaaccaca
gggacacggctgtgctccaaccccccgtgtgaaactcatgagacggggacaaccaacacg
gtgacaacgacagcgccgaggccaccctgctctaatcctccttgtgagacccacgagaca
gggacaaccaacacggtgacaatgacagcgccgaggccaccctgctctaatcctccgtgt
gaaactcatgagacggggacaaccaacacggtgacaacgacagctccgaggccaccctgc
tctaatcctccttgtgagacccacgagacggggacaaccaacacggtgacaaccacgggg
acacggttctgctccaaccccccgtgtgagacccacgagacggggacaaccagcacggcc
accaccaccacggccacctcgcgccccccgcccgagtcagggacagcggcggcgccaccg
ccccgaggcgtccccccctgctccaaccccccctgcgagacccacgagacgggcacgacc
aacacggtgacaatgacatcgtcccagctctgctccaaccccccctgcgagacccacgag
accgggaccaccaacacggccaccacggccaccgcgggctcccggccgggtgacaccacc
acggccaccagcgccgccgccaccgccacctccagcacgggggggtccccgccttgtgcc
aaccccccctgcgagacccccgagagcggggccaccagcacggccgccaccagagcgggg
tcctcgccctgccagagccaccagagcggggccaccagcacggccaccaccaccaccgag
ggggtgacaccgcccctgccctgtgccaccaccaccgctgccaccagccccccccgcgcc
tgctccaaccccccctgcgagacccacgagacggggacgacggccacggccaccacggtc
accgccagcatgggcgccagccaagagccccccccgccggctgccaacgggcagggggag
ggggagaccccccccagcgaggccgggggtccccccgtgccccccgggacccccagcccc
cccggccccagcggcagcgggaccccccagccccgggcggtcaccacggtcactcagtcc
acgccagcgccggggccggccgtgccgaccatctcgtcgctgaccgaatcccccccggca
ccccccgagacccccccaaccaccaccaccaccaccacgcccacccctcctggagacccc
cacccatcatcccaggacccctcctcggccgcctccccgtccccgcccgggcccgaggcc
gctgctcccgccccggccggcgccgagcccgcggggtccccggagcctctggccgtggtg
gtgctgcccccgcccacggccgaggggggcccggccgaggggctggcgctgccccccgag
ctgctggccgaggcggggggcgcggggggaccccccgggctcacccccgaggagctggcg
gtgaccgcggcggccgaggcggcggcggcggcggcggccagcgaggaggcgcaggcccag
gctctggcaatccaggccgtgctgcaggcggcgcagcaggcggtcatggggacatcggag
ccgctggagcccggcgagcccggggggggcccctcggagctggggggcgccctgggggtg
tcggagggggcggggggcgcggggggggcgctgcccctggtgctcacccagcaggacctg
gcggccctggtgcagcaccagcagcacctggccgaggcggccgcgccccctccccatttg
cccaccgaggccttggcccccgccgacagcctcaacgaccccgcgggcgacaccaacggc
ctgggggacctgggcgcggtgcccggggggggcacccccgccaccctgctgccccccccc
ggcgacggcctggccccctcgagcgccttcgtggcccccccgggccccacggttgccccc
agccccgccaagctgcaggcggccgccgccctggccgaggtggccaacggcatcgagagc
acccccgtgaagccggagccgggggcgccgcccaaggcgctgcccaagaaggagaaccaa
tggttcgacgtgggcgtcatcaagggcaccaccatgatggtcactcactacttcctgccc
cccgacgacgccgcccccgccgacgacgatgcctcgggggtcccggaccactcgcagctg
cgccgccaggagctgcagccgggcactgcgtacaagttccgcgtggccgggctcaacgcc
tgcggccgcgggcccttctcggagctgtcggccttcaaaacctgcctgcccggcttcccc
ggggcgccctgcgccatcaagatcagcaagagccccgacggggcgcacctgacgtgggag
ccgccgtcggtgacgtcgggccgcatcgccgagtactcggtgtacttggccatccagggg
gggcccggggggggccccgagcgcgcgggggggggcgcccagctggccttcatgagggtc
tattgtgggcccagcccctcgtgcctggtgccggcctccagcctggccagcgcccacatc
gaccacaccaccaagccggccatcatcttccgcatcgccgcccgcaacgacaagggctac
ggccccgccacgcaggtgcggtggctgcaaggtgggtctggggctctcaaatga
DBGET
integrated database retrieval system
