Agelaius tricolor (tricolored blackbird): 139586804
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Entry
139586804 CDS
T10815
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
139586804 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
atrc01007
]
139586804 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
atrc03016
]
139586804 (VARS2)
Enzymes [BR:
atrc01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
139586804 (VARS2)
Amino acid related enzymes [BR:
atrc01007
]
Aminoacyl-tRNA synthetase
Class I (U)
139586804 (VARS2)
Transfer RNA biogenesis [BR:
atrc03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
139586804 (VARS2)
Prokaryotic type
139586804 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
DUF1400
Motif
Other DBs
NCBI-GeneID:
139586804
NCBI-ProteinID:
XP_071276541
LinkDB
All DBs
Position
Unknown
AA seq
1073 aa
AA seq
DB search
MAAPSLSRAALGAPRVLGPPGAPRARPRAWSSGTPSAGTPPAGESPGSPAWDGPERARLR
GREQREKRQRLRRERGAVREKEPQPLPKGWSPQAELQYQHPLGPDGKKATAVPLPPRYSP
RYVEAAWYQWWERGGAFRPRPPGQAPGGAPVLSLVLPPPNVTGSLHLGHALSVSLQDALV
RWRRMQGWDVLWVPGTDHAGIATQAIVERWLWQQRRQRRQDLGRAEFVREVWRWKERHGE
QILQQLRALGASLDWSRCAFTMDPGFSRAVTEAFVRLFEAGLIRRDQRAVTWSCALRSAL
ADIEVEPRVLTGPTALNVPNCPHPVTFGVLVTFAYPVEGDDGLEVPVATTRPETLFGDVA
VAVHPRDPRYLHLQGRRVRHPFSGALLPVVSDPSVQPQLGTGAVKVTPGHSPQDLALARA
HALPLLSVIADDGTLCPPGGGWLQGVPRFEARAQVVAALAQRGLLRGVTDHAMTLPLCSR
SGDVVEFLLKRQWFLTCGDMAREALQAVTSGRLRLVPKFHEKNWKSWMESAGDWCLSRQL
WWGHRVPAYQVRPGPAPRGGPPGAPEDEEGEDEDEDEDEEGPWFVGRSEAEARAAAARAL
GCPARELHLRQDPDVLDTWFSSALFPFAALGWPDQSADFGRFYPNSLLVTGSDLLFFWVA
RMAMLGQRLTGQLPFTQVLLHSLVRDPQGRKMSKSLGNVIDPRDLIGGATLQELQEKLQT
QTLDPQELRAAQEGQSRQFPQGIPECGADALRLALSSHNAHGPEIRVGVASVLAQRRFCN
KIWNALGFVLRAGQGRGEPPKPPEEVLPEAPMDRWLLARLAGAVAECGRRLEALEVHGAV
AAVQSFWLRSFCDVYLEVAKVSLQCPRLRPGAQATLAAAAELGLRLLAPFAPFVAEELWQ
RLPRAAPAPPSVSLAPFPEPARLAHWRCPELEARVAAMLELVRAVRGLRETLRLGGAARP
PVLVQIPEPAHDWLEQLGPAFQTLSRAGPVELLPLGAEPGPGWAGAKAASGAFVHLRIQG
LVDPDAARAQLRSRLRSLRGAQQHQAREELARLERSLEGLETPGDPPGGGLNK
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctccctcagccgcgctgccctcggcgccccccgggttttggggcctccc
ggggctccccgggcccggccccgcgcctggagcagcgggaccccctcagccgggacccct
ccggccggggagagccccgggagccccgcgtgggacgggcccgagcgggcgaggctgcgg
ggccgggagcagagggagaagcggcagcggctgaggagggagagaggggcggtgcgggag
aaggagccgcagcccctccccaagggctggagcccccaggctgagctgcaatatcagcac
ccgctgggccccgatggcaaaaaggccacggccgtgcccctcccccccaggtacagcccc
cgctacgtcgaggccgcttggtaccaatggtgggagaggggcggggccttcagaccccgc
ccacccggacaggccccggggggggccccggtgctgagcctggtgctgcccccccccaac
gtcaccgggtccctgcacctgggccacgccctgagcgtcagcctgcaggacgcgctggtg
cgctggcggaggatgcagggctgggacgtcctgtgggtgccgggcaccgaccacgctggc
attgccacccaggccatcgtggagcgctggctgtggcagcagcgccggcagcgccggcag
gacctgggccgggccgagttcgtgcgcgaggtttggcgctggaaggagcggcacggggag
cagatcctgcagcagctgcgggcgctcggggcctcgctggactggagccgctgcgccttc
accatggaccccggtttctcccgcgctgtcaccgaggccttcgtgcgtctcttcgaggcc
gggctgatccgcagggaccagagggcggtgacctggagctgcgccctgagatcggcattg
gctgatattgaggtggagccccgtgtcctgacgggtcccacggcgctgaacgtccccaac
tgtccccaccccgtcaccttcggcgtcctcgtcaccttcgcctaccccgtggagggggac
gacgggctggaggtgccggtggccaccacgcgccctgagacgctctttggggacgtggcc
gtggccgtgcacccaagggacccccgatacctgcacctgcagggccggcgggtgaggcac
ccgttcagcggggccctgctgcccgtggtgagcgaccccagcgtgcagccccagctggga
accggtgcggtcaaggtgacccccgggcacagcccccaggacctggccctggcccgggcc
cacgcgctgccgctgctctcggtcatcgccgacgacggcaccttgtgtcccccgggaggg
gggtggctgcagggtgtccccaggttcgaggcccgtgctcaggtggtggcagcgctggcc
cagcgggggctgctccggggggtgacggatcacgccatgaccctgcccctgtgcagccgc
tccggtgacgtcgtcgagttcctgctgaagcgccaatggttcctcacctgcggggacatg
gccagggaggcgctgcaggcggtgacgtcggggcggctccgcctggtgcccaaattccac
gagaaaaactggaaaagctggatggagagcgcgggggattggtgcctttcccgccagctc
tggtggggtcaccgcgtccccgcctaccaggtgaggcctggccccgccccccgggggggt
cccccaggtgcccccgaggatgaggagggtgaggatgaggatgaggatgaggatgaggag
gggccgtggttcgtggggcgcagcgaggccgaggccagggcggcggccgcgagggccctg
ggctgccccgcccgggagctgcacctgcggcaagaccccgatgttttggacacctggttc
tcctccgccctcttccctttcgccgccctgggctggcccgaccagagcgccgattttggc
cgtttttaccccaattcgctgctggtgacgggcagtgacctcctgttcttctgggtggcc
aggatggccatgctgggccagcggctgacggggcagctgcccttcacacaggtgctgctg
cactccctggtccgggacccccagggccgcaagatgagcaaatccctggggaacgtcatc
gacccccgcgacctcatcgggggcgccacgctccaggagctgcaggagaagctccagacc
caaaccctggacccgcaggagctgcgggcggcccaggaggggcagagccgtcagttcccg
caggggatccccgagtgcggcgccgacgccctgaggctggcgctgagcagccacaacgcc
cacggccccgaaatccgggtgggcgtggcctcggtgctggcccagcgccgcttctgcaac
aaaatctggaacgcgctggggttcgtgctgagggcggggcaggggcgcggggagccccca
aaaccccccgaggaggtgctcccagaggcccccatggaccggtggctcctggcccgcctg
gccggggccgtggccgagtgcggccgcaggttggaggccctggaggttcacggggccgtg
gccgccgtgcagagcttctggctgcggagcttctgcgacgtttacctggaggtggccaag
gtgtcgctgcagtgcccgcggctccgtcccggcgcccaggccacgctggcggccgcagcc
gagctggggctgcgcctcctggcccccttcgcccccttcgtggccgaggagctctggcag
cgcctgccccgcgccgcccccgcgccccccagcgtcagcctggcccccttccccgagccc
gcccgactggcccactggcgctgccccgagctggaggcgcgggtggcggccatgttggag
ctggtccgggccgtgcgggggctgcgcgagaccctcaggctcgggggggccgcgagaccc
ccagtgctggtgcagatcccggagccggctcatgattggctggagcagctcggccccgcc
ttccagacgctctcaagggcggggcctgtggagctcctccccttgggggcggagccgggg
ccgggctgggcgggggctaaggcggcttctggagccttcgtgcacctgcggatccagggc
ctggtggatcccgacgccgcccgggcccagctccgctcccgcctgcgcagcctcaggggg
gcccagcagcaccaggcccgagaggagctggcccggctggagcggagcctggaggggctg
gagacccccggggacccccccggggggggcttaaataaatga
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