Agelaius tricolor (tricolored blackbird): 139586924
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Entry
139586924 CDS
T10815
Name
(RefSeq) LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
139586924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
atrc04515
]
139586924
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
NGL family
139586924
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
LRR_9
ig
V-set
LRRNT
Ig_2
LRR_R13L1-DRL21
GRP
DUF6060
Motif
Other DBs
NCBI-GeneID:
139586924
NCBI-ProteinID:
XP_071276712
LinkDB
All DBs
Position
Unknown
AA seq
679 aa
AA seq
DB search
MALRDGPEGARAPPPPPRRCPPEPPWCWGCWGALLGALGAVPGAGGSASGTPCPAACTCS
NQASRVICTRRELLEVPQSISVNTRYLNLQENHIQVIRTDTFKHLRHLEILQLSRNLVRK
VEVGAFNGLPNLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSL
RRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKEIPNLTALVRLEELELSGNRLGRV
RPGSFQGLGSLRKLWLMHARVAAVERNAFDDLKALEELNLAHNDLASLPHDLFAPLHRLE
RVHLHHNPWRCDCDVLWLSWWLRETVPSNTSCCARCHAPPALRGRYLGELEPRHFTCYAP
VIVEPPADLNVTEGMAAELKCRTGTAMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFT
NVTVQDTGQYTCMVTNAAGNTTATATLNVSAADAAAAAAAAAAATGYTYFTTVTVETTEG
AGGDDQAPQTPAAPTAAGWEPAGASTAAPATRATGKPFTVPITAAAAGAAAGGGLQDLDD
VLKTTKIIIGCFVAITFMAAVMLVAFYKLRKQHQRHKHRGGPARAVEIVNVEDELAGGPA
GGGGGGGGPGGGGAGTGGDNRLALPALEREHLDRYAALAAHYGGPAAALGCGKTPLLNSV
HEPLLFKSPSKENVQETQI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggccctgagggatggccctgagggtgcccgggcgccgccgccccccccccggcgctgc
cccccagagcccccctggtgctgggggtgctggggggcgctgctgggggctctgggggcc
gtgcccggggcggggggcagcgcctcgggcaccccctgcccggccgcctgcacctgcagc
aaccaggccagccgggtgatctgcaccaggagggagctgctggaggtgccccagagcatc
tcggtcaacacgcgctacctgaacctgcaggagaaccacatccaggtgatccgcaccgac
accttcaagcaccttcgccacctggagatcctccagctcagccgcaacctggtgcgcaag
gtggaggtgggcgccttcaacgggctgcccaacctcaacacgctggagctcttcgacaac
cgcctgaccacggtgcccacgcaggccttcgagtacctgtccaagctccgcgagctctgg
ctgaggaacaaccccatcgagagcatccccagctacgccttcaaccgcgtgccctcgctg
cgccgcctcgacctgggcgagctcaagcgcctcgagtacatctccgaggccgccttcgag
ggcttggtcaacctgcgctacctcaacctgggcatgtgcaacctcaaggagatccccaac
ctgacggcgctggtgaggctggaggagctggagctgtcggggaatcgccttggccgggtg
aggccgggctccttccaaggcttgggcagcctgaggaagctgtggctgatgcacgcgcgg
gtggcggcggtggagcgcaacgccttcgacgacctgaaggccctggaggagttgaacctg
gctcacaacgacctggcctcgctgccccacgacctcttcgcgccgctgcaccggctggag
cgcgtgcacctgcaccacaacccctggcgctgcgactgcgacgtgctgtggctcagctgg
tggctgcgcgagaccgtgcccagcaacaccagctgctgcgcccgctgccacgcgccgccg
gcgctgcgcggccgctacctgggcgagctggagccccggcacttcacctgctacgcgccg
gtcatcgtggagccgccggccgacctcaacgtcaccgagggcatggcggccgagctcaag
tgccgcacgggcacggccatgacctcggtcaactggctgacgcccaacgggacgctgatg
acgcacggctcgtaccgcgtgcggatctcggtgctgcacgacgggacgctcaacttcacc
aacgtcaccgtgcaggacaccggccagtacacctgcatggtcaccaacgccgccggcaac
accacggccaccgccacgctcaacgtctcggccgccgacgccgccgcggccgccgcggcc
gccgcggcggccaccggttacacctacttcaccacggtcaccgtggagaccaccgaggga
gccggcggcgacgaccaagccccccaaacccccgcggcgcccacggcggccggttgggaa
ccggccggcgcctccacggccgccccggccacgcgcgccaccggcaaacccttcaccgtg
cccatcacggcggcggcggccggcgcggcggccgggggaggtctccaagatttggacgac
gtcttgaagaccaccaagatcatcatcggttgcttcgtggccatcaccttcatggccgcc
gtcatgctggtggccttctacaagctccgcaagcagcaccagcgccacaagcaccgcggc
ggccccgcgcgcgccgtggagatcgtcaacgtcgaggacgagctggccggaggtcccgcc
ggcggcggcggaggcggcggcggccccggcggcggcggcgccgggacgggtggggacaac
cggctggcgttgccggcgttggagagggagcacctggacaggtacgcggcgttggccgcc
cactacgggggcccggcggcggcgctgggctgcgggaagacgccgctgctcaactcggtg
cacgagccgctgctcttcaagagcccctccaaggagaacgtgcaggagacgcagatctga
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