KEGG   Agelaius tricolor (tricolored blackbird): 139586974
Entry
139586974         CDS       T10815                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like isoform X1
  KO
K10695  E3 ubiquitin-protein ligase RNF1/2 [EC:2.3.2.27]
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    139586974
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:atrc04121]
    139586974
   03036 Chromosome and associated proteins [BR:atrc03036]
    139586974
Enzymes [BR:atrc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     139586974
Ubiquitin system [BR:atrc04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    139586974
Chromosome and associated proteins [BR:atrc03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Canonical PRC1 (PRC1.2/1.4)
     139586974
    Noncanonical PRC1 (PRC1.1)
     139586974
    Noncanonical PRC1 (PRC1.3/1.5)
     139586974
    Noncanonical PRC1 (PRC1.6)
     139586974
SSDB
Motif
Pfam: RAWUL zf-C3HC4_2 zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-RING_UBOX zf-Nse zf-C3HC4_4 zf-RING_6 zf-RING_5 zf-RING_4 RING_XB3-XBAT31 zf-rbx1 zf-UDP TRAF3_RING zf-C3HC4_5 Sina_RING zf-ANAPC11
Other DBs
NCBI-GeneID: 139586974
NCBI-ProteinID: XP_071276817
LinkDB
Position
Unknown
AA seq 351 aa
MAAPASAQSASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAH
QDRVLAKLSRLHNQQALSSSIEEGLKMQAMHRAQRVRKLAAESDPAGFSGGEEGLEALGT
PPEPPGPSRKRSRASDDSGPDPEAETAPEGAGPGGGAGGGAGPGGRGSPEAEVEAGSSEI
ELVFRPHPLLVEKGEYCQTRFVKTTSNATVDHLSKYLALRIALEEAPPPGADPAPSLGDV
SEKQYTIYTTPAAGAAFTPLNGSLTLELVNEKFWKLSKPLELYYAPTKEQK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggccgcccccgccagcgcgcagagcgccagcaagacctgggagctgagcctgtacgag
ctgcaccgcaccccgcaggaggccatcatggacggcacggagatcgcggtgtccccgcgc
tcgctgcactcggagctgatgtgccccatctgcctggacatgctcaagaacaccatgacc
accaaggagtgcctgcacaggttctgctccgactgcatcgtcaccgcactgaggagcggg
aacaaggagtgtcccacctgcaggaagaagctggtttccaagcgttccctgcgccccgac
cccaatttcgacgcgctcatctccaagatttacccgagccgtgacgagtacgaggcgcac
caggaccgggtgctggccaagctcagccgcctgcacaaccagcaggccctgagctccagc
atcgaggagggcctcaagatgcaggccatgcacagggcgcagcgggtgcggaagctggcg
gccgagtcggaccccgcggggttctcggggggcgaggaggggctcgaggcgctgggcacg
cccccggagccgccggggcccagccgcaaacgctcccgcgcctccgacgactccgggccc
gaccccgaggccgagaccgcccccgagggggcggggccggggggcggggccgggggcggg
gccgggcccggcgggcggggcagccccgaggccgaggtggaggcggggagcagcgagatc
gagctggtgttcaggccacaccccctgctggtggagaagggcgagtactgccagacacgg
ttcgtgaagaccacctcaaacgccacggtggatcacctgtccaagtacctggcgctgcgc
atcgccctggaggaggccccgccccccggggctgaccccgccccctcgctgggtgacgtc
agcgagaagcagtacaccatctacaccacgcccgccgccggcgccgccttcacgcccctg
aacgggtctctgacgctggagttggtgaacgagaagttctggaagctcagcaaacccctg
gagctctactacgcccccaccaaggagcagaaatag

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