Agelaius tricolor (tricolored blackbird): 139587147
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Entry
139587147 CDS
T10815
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1 isoform X1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139587147 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139587147 (SART1)
04121 Ubiquitin system [BR:
atrc04121
]
139587147 (SART1)
Spliceosome [BR:
atrc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139587147 (SART1)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139587147 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SART-1
HIND
LcrG
Motif
Other DBs
NCBI-GeneID:
139587147
NCBI-ProteinID:
XP_071277184
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MGASKKHRERGGAEAAEEAPGAAGTGGGGGSSSSAGRPREHRKHRHRGGERRGKRSRSRG
ERGGSGGGSGSSRRGGTEDAGRSGHGRGGSENERRAKRERKEEREEPAAPKSAAGESSLS
VEETNKLRAKLGLKPLETSTAKKEAGTKEDPVAAEVINPLALRQREEIREKLAAAKEKRL
LNQKLGKVKTLGEEEPWLDDAAAWIERSRALQREKELAEKRAKLLEEMDQEFGVSPLVEE
EFQRRRRERYSARDLQGLTVEHDPASIPEGQTLVLTLKDRGVLEAGEDVLEQVALAAAAR
AQEEQELRRRRPNYDPYGEQEPGPGSQAPALLPQYDEPGPRPSFRLGPGGTQDTGGDPRP
GPLPPPGPAPQSLELPLPRLASEYLSPEEMAVTFRKTRRRVRKLRRKEKPLRADDLLATA
PGDTQGDFGSRSRGRGRRVQEDEEGAGGDPENGPDPPEGTPQAPLPSDDTRTENMEISSD
DEAAPPGTPPALEEDEAEQELQQQLERGRRLRQLRELREGGGEKVLELLRGGSGGVPGGP
DPRGGGQHRLQRHLRVLPDPGRDPHLRPGREPRGAGRAHGPGAGRAPGVAPGAAGLGGGG
ERGVEQREPGRGTAAPGLLSLVHHDPGRGAHREPGPGSGAAALPEQRALGDHGAEGGASE
SPEQIPALGRVLHRGQDGHR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcctcgaagaagcaccgggagcgcggtggggctgaagcggccgaggaggccccg
ggagcggccgggacgggcggcggcggcggcagcagcagcagcgcggggcggccccgcgag
caccgaaagcaccggcaccgtggcggggagcggcgcgggaaacgcagccgctcccgggga
gagcgcggcggctccgggggaggctccggttcctcgaggcgcggagggaccgaggatgcc
gggaggagcggccatggccggggcggctccgagaacgagcggagagccaagagggagagg
aaggaggagcgggaggagcccgctgctcccaaatctgcagcaggtgaatcctccctgagc
gtggaagaaaccaataagctccgggccaaactgggactgaaaccactggagaccagcacg
gccaagaaagaggcaggcaccaaggaggacccggtggcagccgaggtgatcaatcccctg
gcgctgcggcagcgcgaggaaatccgcgagaagctggcggcggccaaggagaaacggctg
ctgaaccagaaactggggaaggtgaagacgctgggggaggaggagccctggctggacgac
gcggccgcgtggatcgagcgcagccgagcgctgcagagggagaaggagctggcagagaaa
agggccaagctgctggaggagatggaccaggagttcggggtcagccccttggtggaggag
gagttccagcggcgccggagggagcgttacagtgcccgggacctgcaggggctgacggtg
gagcacgacccggcctcgatccccgagggacaaacgctggtgctgaccctcaaggacagg
ggtgtcctggaggccggtgaggatgtcctggagcaggtggctttggccgcggccgcgcgc
gctcaggaggagcaggagctgcgccggcgccgccccaactacgacccctacggagagcag
gagcccgggcccggctcccaggcgccggcgctgctccctcagtacgatgagccggggcca
cgcccctcgttccgcctgggcccgggggggacgcaggacacgggcggggacccccggccc
gggcccctccccccgccaggccccgccccccagagcctggagctgcccctcccccgcctg
gccagcgagtacctgagccccgaggagatggcggtgacgttccgcaagacgcggcgccgc
gtgcggaagctgcgcaggaaggagaagcccctgagggccgacgacctcctggccacggcc
ccgggggacacccagggggacttcggctccaggtcgcggggccggggccggcgggtgcag
gaggatgaggagggggccgggggggaccccgaaaacggccccgacccccccgaggggacc
ccccaggccccgctgccctcggacgacacccggacagagaacatggagatcagcagcgac
gatgaggccgccccgcccgggacgcccccggccctggaggaagatgaggctgagcaggag
ctgcagcagcagctggagcggggccggcgcctgcggcagctgcgggagctgcgcgaggga
gggggagagaaggtgctggagctgctccgggggggctccgggggggtcccggggggcccg
gacccgcgggggggggggcagcatcgtcttcaacgccacctccgagttctgccggaccct
gggcgagatccccacctacggcctggccgggaaccgcgaggagcaggacgagctcatggc
cctggagcgggccgggcgcccggcgtcgcccccggagccgccggactcggagggggagga
gaacgtggggtggagcagcgtgaacctggcagaggaacggcagcaccaggacttctcagc
ctcgtccaccacgatcctggacgaggagcccatcgtgaaccggggcctggcagcggcgct
gctgctctgccagaacaaagggctcttggagaccacggtgcagaaggtggcgcgagtgaa
agccccgaacaaatccctgccctcggccgtgtactgcatcgaggacaagatggccatcga
tga
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