Agelaius tricolor (tricolored blackbird): 139587197
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Entry
139587197 CDS
T10815
Symbol
SRRT
Name
(RefSeq) LOW QUALITY PROTEIN: serrate RNA effector molecule homolog
KO
K27103
serrate RNA effector molecule
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139587197 (SRRT)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
139587197 (SRRT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARS2
SERRATE_Ars2_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
139587197
NCBI-ProteinID:
XP_071277295
LinkDB
All DBs
Position
Unknown
AA seq
875 aa
AA seq
DB search
LASQDWERGRERRSRDYRDYDRTRRERFSPPRHELSPPQKRLRRDWDDHSTDPYHGGYEL
PYGGGGAGPTYGPPQAPWGPHEMQQQLLQHQLLPIQARLGTIAEVDLGMAPPVMKSFKEF
LLSLDDACGRDGAVKRYNDYKLDFRRQQLQEFFLAHKDEEWFRSKYHPDEAGRRQQEAQA
ALRNRLGVFLYLWEHGWLENLLLDIDRAPQIVKTLDAAVIKMEGGTEHDLRILEQEEEEE
RPDKAEGPKKEEPRAPEPPGKGPAERPEGDPGAKAEGAEPGAEPASGAGPEEEEEGPDKG
PKAEEGDKEGGAKARPRQRSRDSEDGDSDSGDSEGTRREPGKEEPKEDKAPPEEAAGTPP
PTGSAPSPPPPPKAKEGPGGAPGGGPEARPRPLHKTCSLFMRNIAPNIAQAEIVALCKRY
PGFMRVALSEPQPERRFFRRGWVTFDRSVNIKEICWSLQNIRLRECELSPGVNRDLTRRV
RNVSGLTQHRPIVRHDIKLAARLVQALDARARLWSPPGAAATATGDGDTAGGDTGGSGGG
DSEAPPSTEPGAQNPVLRHITDYLIEEVSAEEEELLGQGQAQGQGQAQGAAPAEDAARET
NPAEVTVERDEKLLKVLDRLLLYLRIVHSVDYYNTSEYPNEDEMPNRCGIIHVRGPLPPN
RVSHGEVSEWQRGFEARLAPLLAGPGSVPEEEAQRLGRKDPEQELEKFVSANTQELGKDK
WLCPLSGKKFKGPEFVRKHIFNKHGDKMGAVRKEVLFFNNFLMDPKRPALPEGGKGGPAG
GPNAGLTPGGLPYPPQSPQGLMPYGSPRPPMLGYGGSHPYPPGPYGGRGSYETFRGQGGA
GGGYLNKPRSRMVRGDPRAIVEYRDLDAPEDVDFF
NT seq
2629 nt
NT seq
+upstream
nt +downstream
nt
tttggcctcgcaggactgggagcggggccgggagcgccgcagccgcgattaccgggacta
cgaccgcacccggcgggagcgattctccccaccccggcacgagctgagcccgccccagaa
acggctgcgcagggactgggatgaccacagcactgacccctaccacggcgggtacgagct
gccctacggggggggcggcgccggccccacctacggccccccccaggcgccctggggccc
ccacgagatgcagcagcagctcctgcagcaccagctgctgcccatccaggccaggctggg
caccatcgcggaggtggacctgggcatggcgcccccggtgatgaagagcttcaaggagtt
cctgctgtccctggacgacgcctgtggacgagacggagccgtgaagcgctacaacgacta
caagctggacttccggcggcagcagctgcaggagttcttcctggcccacaaggacgagga
gtggttccgctccaagtaccacccggacgaggccgggcggcggcagcaggaggcgcaggc
ggcgctcaggaaccgcctgggggtgttcctgtacctgtgggagcacggctggctggagaa
cctgctgctggacatcgaccgtgcgccgcagatcgtcaaaaccctggatgcagcggtgat
caagatggaggggggcacggagcacgacctgcgcatcctggagcaggaggaggaggagga
gcgccccgacaaggccgaaggccccaagaaggaggagccgagggccccggagccgcccgg
gaagggcccggccgagcgccccgagggcgaccccggcgccaaggccgaaggggcggagcc
gggggcggagcctgcatcaggggcggggccagaggaggaggaggaggggccagacaaggg
gcccaaggctgaggaaggcgacaaggagggcggggccaaggcgcggccgcgtcagcgcag
ccgggacagcgaggacggggacagcgacagcggggacagcgaggggacccggagagagcc
cgggaaagaggagcccaaggaggacaaagccccccccgaggaggcggccgggacccctcc
ccccacgggcagcgccccctcccccccgcccccccccaaggccaaggaggggccgggggg
ggccccgggggggggtcccgaggccaggccgagacccctgcacaaaacgtgctcgttgtt
catgaggaacatcgcgcccaacatcgcccaggccgagatcgtggcgctgtgcaagcgcta
ccccgggttcatgcgcgtggcgctgtcggagccgcagcccgagaggaggttcttcaggag
gggctgggtcaccttcgaccgcagcgtgaacatcaaggagatttgctggagcctgcagaa
catccggctccgtgagtgcgagctgagccccggcgtgaaccgggacctgacgcggcgcgt
gcgcaacgtctcggggctcacccagcaccgccccatcgtgcgccacgacatcaagctggc
cgcgcgcctggtgcaggccctggacgcccgcgcgcgcctctggagccccccgggagccgc
tgccaccgccaccggggacggggacacggccgggggggacacgggcggcagcgggggcgg
ggacagcgaggccccgcccagcaccgagcccggggcccagaacccggtcctccgtcacat
cacggattacctgatcgaggaggtgagcgccgaggaggaggagctgctggggcagggcca
ggcccaggggcagggccaggcccagggcgcggccccggccgaggacgccgcgcgcgagac
caacccggccgaggtcaccgtggagcgcgacgagaaactgctcaaggttctggaccgcct
cctgctctacctgcgcatcgtgcactcggtcgattactacaacacctccgagtaccccaa
cgaggacgagatgcccaacaggtgcgggatcatccacgtgcggggcccgctgccgcccaa
ccgcgtctcccacggcgaagtgtcggagtggcagcgcgggtttgaggcgcgcctggcccc
gctcctggccgggcccggctctgtccccgaggaggaggcgcagcgcctcggccgcaagga
ccccgagcaggagctggagaaattcgtgagcgccaacacccaggagctgggcaaggacaa
gtggctgtgccccctcagcggcaagaagttcaagggccccgagtttgtgcgcaagcacat
cttcaacaagcacggggacaagatgggcgccgtgcgcaaggaggttttgttcttcaacaa
tttcctgatggaccccaagcgcccggccctgcccgaggggggcaagggcggccccgcggg
gggacccaacgcaggtctgaccccgggggggctcccgtaccccccccagtccccccaggg
gctgatgccctacgggagcccccggccgcccatgctgggatacggaggatcccacccata
cccccccgggccctacgggggtcgcggcagctacgaaaccttcagggggcaggggggggc
cgggggggggtacctgaacaaaccccgcagcaggatggtgcggggcgacccccgggccat
cgtcgagtaccgggacctggacgcccccgaggacgtcgatttcttctga
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