Agelaius tricolor (tricolored blackbird): 139587344
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Entry
139587344 CDS
T10815
Name
(RefSeq) neural-cadherin-like
KO
K27892
neural-cadherin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Cell adhesion molecules [BR:
atrc04515
]
Cadherins
Cadherin related
139587344
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139587344
NCBI-ProteinID:
XP_071277677
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All DBs
Position
Unknown
AA seq
2865 aa
AA seq
DB search
MGRARRSGCGLLPLLLLLLAGAAGLECGVSPRLLRFSGQVPENSPAGTRVRGLQVPLRRL
LGPGEPAGEWALEGDGASRFSLQRRPGGGGGLLLLRTAEPLDREAQPEYGLRLRRRAGRP
PREALLRVRVLDRNDHRPRLPPVRPLEVDELVPLGTEVARLRASDGDEGANARLTYRPWP
PGAGSHLLFVVPRSGQVLTVGSLLGLRRLRLCVAALDHGRPRPLRSPARCLRLAVRGRGA
AGGAGRRRGPRSLQPPGAGARRYTARLAPGARVGDTVFTVPRSRERAAGGWFELASPGAT
PVGIDRTSGRLYLRRELRAGGRAEVLVKVHRGGGGDDDWYLCHVTLLAPEEELLSWAMYP
YPYLARVDPDARKGALVYQLTARCSSPGNTSAAITYTLIAGGDERFRVDKDTGMIMTTGL
PLTWNKEYVVTVEASDEQGNRSPYASVSILAGSRPPQFTNMSYSVFVPENTPAGEKVAVV
EAVSFQSQPLSYTLLTNPSGLFRVRQESGELSLTHPVDYESEHHLYHLLLRAMEAESTLS
SVTEVMVHITDENDCSPEFQRSIYSRDNVPETIPVGTSVLQVLATDCDSGSNSEISYFIQ
STDFSITRHGVVNSNQRLNFEQADHMYEFVVIAVDRGHPPRTGTASVRIRMANVNDEAPV
FSQALYRTFLSEDAGPGTLVATVRAEDPDGDGLLYLITGGNEEGNFELDSQKGIIKLRRN
PPPSLKGPQYTLNVTAIDDNASGGPTPLSSFAEVIVGINDVNNNKPVFRECAYYSDSTWV
LENQPPGTRVLQVEAYDADLGINGEVKYGLMHRDGASLGFSIDPDTGVITTTQSFDREKQ
REHTLSVTATDQAPEPLIGVCQLTVLIADLNDNEPTFENSRYQYFLSEDTPVGTSFLRVA
AHDSDQGVNAAVTYSMLEHQLEYFQINPSTGWVYVNCPLPQTMLISRYIVATDGGNRSSS
VELTVTVTSALSQPPRWEQSSYWVTIPENTIRDTKIVTIKATSPLGDPRVTYNLEEGQVP
ETNMPVRFYLKPNRADGSASLLVAEPLDFETTKFFTLTVRAQNVAMTPLASFATVCVNIT
DVNDNVPFFMSSNYEVSVPEGADVGTSVVQVLAMDLDSGLHGEVHYLILKDANEDYQFFT
IEPETGIIYTQASFDREKRASYLIEVQSQDLSESARPGVHGQPNTDTAYVRIFVSDVNDN
APAFPQSVYEVSMDEDRDVGSPVVTATADDEDEGANAKLRYQITSGNVKGVFDVEPEIGT
VFIAQPLDYEQEQHYELRLVASDGKWENHTLIIINVVNKNDEAPVFTQNEYQGSVLEELT
DLPVLVLKVSAMDPDQAANQAAISYSLHGQGAGSEFSIDESTGEIRAHTRLDREKRSTWR
FLVLATDEGGEGLTGFADVIIEVRDVNDNAPLFLCVSDGCFTGLIPEGSPADTPIMEMTA
VDLDDPKAGINAVLTYSIIQNVKNEINLNLFSIDSVSGTISTVLGSLDREKEDKYLVVVE
ARDGGGLTGTGTATILVTDVNDHAPVFQQRIYTAFVSENASINTEVAVVSAVDRDEGENA
MVTFSIVDGDSDRKFSIETDELNNCGFIRLRKRVDFEKPHERVFNLTVKAEDMDFFSITH
CVIYVEDSNDHAPVFYPQFYEVAALGEDVPVGTKIIQVSAVDLDSGLNGRFSFHLLNKSD
PGGQFSLASDGWLMVAGLLDYETVAQYQLIVIATDMGQPPLTGSATVLVTLQDVNDNGPE
FEAHYNPVVWENTASPQVVQMNETSTLLYAKDRDTAVNGAPFSFRLLSDLDSLTSFSLQD
LHNGSAVLTALRTFDREVHKAFYLPILITDSGIPPMSSTNTLTVNIGDQNDHPHSAGYME
SLIYSYDGILPTTVLGQVSAPDADDWDRKIYQFEGKTSRYFILNDNSGLLTIKEGTPPGT
YNIRVRVIDGVWPDVISTVKVIVKEIKDDALRNAGSVRIKGITPEEFISQSPEKQSKYYQ
MKKLLSEIISVQLENVHIFSVLNSPSPVRGVDVWFAVYGPPYYKAEKLNGNVAASRAWLE
SILDINITQTGIDECVTADCTHSSGCISKHEQNHVPTITTAGSVSLVSVTVLSHAVCGCA
ARENPHLSCSSYQTNPCLNGGTCVDTDLGYRCKCAAKFHGPDCQQTKHSFRGHGYAWFPP
LQPCFESRISLEFITEVADGLLLYHGPAAPGQPGEQESFLALELSGGVPSLTVSHSSGEL
FLQLSQKVNVADRRWHNIKIINDGKEVKLILDNCLNVSVRDNGSVTKKISQMDLSTCEAS
GEIVASQSMGKLFSGHQPLQLGGVKTLPYRDSQRHFRGFVGCIRNVIVDSKVYDLEHPAE
SLNSAPGCVLMDEMCQSGGMASCGTHGKCVGGWDFFHCDCSPGYAGLACEKVLPEWAFGR
DSWIHYEPRRTRSARSTRVQLLVRTRISHSTLLSLASADGNGHIRLEVVEGFFSVNFSLG
DKNHCLRMRTLRINNGQWVLLTMERYNNEFTLRVNSGGGDQEVTSALGVTRWFEMDWASI
VLGNRLPNHSENDFQGCMRDVQLDGQPLLVEGRSTEFGLILRRQGVTMGCHSSACSSQPC
YSPFLCVDLWRKYECRCPAGKVEVTDTLTGLRHCTSSPCGHWTCRNGGTCVAQSQDKTIC
QCPEGYKGRWCEISQVKAGRPVGLSSGSILAISMCLLVFLALLVSYTVWSQWGSSGFRKG
GIYHIPEERESWEDVRENVFNYNEEGGGERDQNAYDIDELKKPLHKIPRSSSRAAAPHSR
TPTGPKRDSLPKHAHQKQSISAVTSIPDFKEYVSQIIRDADNDLKSLPADTIHFYCLEGQ
CSLAGSLSSLDSISGDEDLNYDCLQEWGSKFEKLKELYAVSNENL
NT seq
8598 nt
NT seq
+upstream
nt +downstream
nt
atgggcagggcgcggcggagcggctgcgggctgctcccgctcctgctgctgctgctcgcc
ggggcggcggggctggagtgcggtgtctccccccgcctgctgcgcttctccgggcaggtg
cccgagaacagcccggcggggacgcgggtgcggggtttgcaggtgccgctgcggaggctg
ctgggccccggggagccggccggggagtgggcgctggaaggcgacggcgcctcccgcttc
tccctgcagcggcggccgggcggcggcggggggctgctgcttctccgcaccgccgagccc
ctggaccgggaggcgcagcccgagtacgggctccggctgcggcggcgagcgggacggccc
ccccgggaggcgctgctgcgggttcgggtcctggaccgcaacgaccaccggccccggctg
ccgccggtgcggccgctggaggtggacgagctggtgccgctgggcacggaggtggcccgg
ctccgcgcctcggacggcgacgagggcgccaacgcgcgcctcacctaccggccctggccg
ccgggcgccggcagccacctgctcttcgtggtgccccgcagcgggcaggtgctgaccgtg
ggctcgctgctggggctgcgccggctccgcctctgcgtggcggctctggaccacgggcgg
ccgcggccgctgcgcagccccgcgcggtgcctgcgcctggccgtgcgcggacggggggcg
gcgggcggcgcggggcggcggcgggggccgcgctcgctgcagccgccgggggccggggcc
cggcgctacacggcccgcctggcccccggagcgcgggtgggcgacaccgtcttcaccgtc
ccgaggagccgagagcgggcggcgggcggctggttcgagctggcctctcccggtgccacc
cccgtggggatcgacaggacgtcggggcggctctacctgcggcgggagctgcgagcgggc
ggccgggcggaggtgctggtcaaggtgcaccgcggcggcggaggagatgatgactggtac
ctgtgccacgtgactctccttgccccggaggaggagctgctgtcctgggccatgtacccg
tacccgtacctggcgcgcgtcgaccccgatgcgcgcaagggcgcgctcgtctaccagctc
acggcacgttgcagcagccctggaaacacctctgctgccataacctacactctcattgca
ggtggtgacgagcgattccgagtggataaagacactggcatgatcatgaccactggtctg
cctttgacgtggaacaaggagtatgtggtgactgtggaagcctctgatgagcagggcaac
agaagcccctacgcctctgtttccatcctggccggctcccgccctccacagttcacaaac
atgtcctacagcgtgtttgtccctgaaaacactccagcaggagaaaaagtagcagttgtt
gaggctgtttctttccagagccagcctctttcctacactctcctgacaaacccctctggg
ctgttccgggtgaggcaagagagtggagagctcagcctgacccaccccgtggactacgag
agcgagcaccacctctaccacctccttctgagagccatggaagctgagagcactctcagc
agtgtgactgaggtcatggtccatatcaccgatgaaaatgactgttctcctgagttccag
cgctccatttacagcagggacaacgttcctgaaaccattcccgttggcacatctgttctg
caagtgcttgcaacagactgcgactctggctccaactctgagatctcttacttcatccag
agcactgatttttccatcacacgtcacggggtcgtcaattctaaccagaggctgaacttt
gagcaagccgaccacatgtacgagtttgtggtgatcgctgtggacagaggacacccccct
cgcacggggacggcatccgtgcgcatccgcatggccaacgtcaatgacgaggctcccgtc
ttctcccaggccctttacaggaccttcctttcagaagatgctggtcctggcaccttggtg
gcgactgttcgggcagaggaccctgatggagacgggctgctctatctgatcacagggggc
aatgaggagggcaactttgagctggatagccagaaaggtatcattaaactccgcagaaac
ccaccacccagtctgaaagggccacagtacaccctgaatgtcacggccatagatgacaat
gcctcagggggacccactcctctgagcagttttgctgaggttattgtaggaattaatgac
gttaataacaacaagcctgtctttagagagtgtgcttactacagtgacagcacctgggtt
ctggagaaccagcctccaggcacgcgcgtgctgcaggtggaagcctatgatgcagacctt
ggcatcaatggagaggtgaagtatgggctcatgcaccgagatggagcttcccttggcttc
agcattgacccagacacaggggtcatcaccaccacgcagagtttcgaccgggagaagcag
cgggagcacactctgtcagtcactgccacggaccaggcgccggagccgctgatcggcgtg
tgccagctcaccgtgctcatcgccgacctcaacgacaacgagcccacgtttgagaacagc
cgctaccagtacttcctcagcgaagacactccggtggggacgagtttcctccgagttgca
gctcacgacagtgaccagggtgtgaatgctgctgtcacatactcaatgttagagcatcag
ctggaatacttccagatcaaccccagcacaggctgggtgtacgtgaattgcccactaccc
cagacaatgctcatcagccgctatattgtagcgacagacggcgggaacagaagcagcagc
gtggagctgacggtgactgtcaccagtgcactgagccagccaccccgctgggagcagagc
tcatactgggtaaccatccccgaaaacaccatccgtgacaccaagattgtgaccatcaaa
gccacatcccctcttggtgatcccagggttacgtataacctggaggagggtcaagtgcca
gagactaacatgccagttcgtttctatctgaagccaaacagagctgatggatctgcttct
cttctagtcgctgagccacttgactttgagactactaagtttttcaccctgacagtccgg
gcacaaaatgtagcaatgactcctttagcttcctttgccactgtttgtgtgaatataaca
gatgtcaatgacaatgttcctttcttcatgtcttctaactacgaggtgtctgtgccagaa
ggagcagatgttggcacgtccgtggttcaggtgttagctatggacttggattctggccta
catggagaggttcactacttaatattaaaagatgctaatgaggattatcagttcttcacc
attgaacctgagacaggaattatttacacccaggcatcttttgacagagagaaaagagcc
tcttacttgattgaagtgcagtctcaggacttatcagaatctgctagacctggtgttcat
gggcagcccaacacagacacagcctacgtgaggatttttgtcagcgatgtgaacgacaac
gccccggcatttcctcagtcagtgtatgaggtcagcatggatgaggacagggacgtggga
agtcctgttgtgacagcaacagcagatgatgaagatgagggtgcaaatgccaaactaagg
tatcagatcacttcaggaaatgtgaaaggggtttttgatgtggaacctgagattggaact
gtattcattgctcagcctttggattatgaacaagaacaacattatgagctccggcttgta
gcttctgatggaaaatgggaaaaccacacccttatcatcatcaatgttgtcaataagaat
gatgaagcaccagtcttcactcagaatgaataccagggcagtgtcttggaggagctcact
gatctgccagtacttgttctaaaggtttctgcaatggatcccgaccaagcagcaaatcaa
gctgccattagctactccctgcacgggcagggagctggcagcgaattcagcatcgatgag
agcacaggtgagatcagagcacacaccaggctggaccgggagaagcgatccacgtggcgc
ttcctcgttcttgccacggatgagggcggagagggcctgacgggctttgcagacgtgatc
atagaagtgagggacgtgaacgacaacgcaccccttttcctctgtgtgtcggatggctgt
ttcacaggcctcattcctgagggctctccagctgacactcctatcatggaaatgacagca
gtggacctcgatgaccccaaggctggtataaatgctgtgctaacatacagtatcattcag
aacgtcaagaacgaaattaatttgaacttgttctcaattgattcagttagtggcaccatc
tctacagtgcttgggtccctggaccgtgagaaggaagacaaatacctagtggtggttgag
gccagagatggaggagggctcactgggacaggcactgccactattttggtgactgacgtg
aacgatcatgctccagtcttccagcaaaggatctacacagcatttgtctccgagaatgcg
agtattaacactgaggtggcagtggtgtctgctgtggacagagatgagggagaaaatgcc
atggtgacattcagcatcgttgatggggacagtgaccgcaagttctccatagagacagat
gaactcaacaactgtgggtttatccgactacgcaaacgggtcgactttgagaagcctcat
gagagggtattcaatttgactgtgaaagcagaggacatggatttcttcagcatcactcac
tgtgtgatttatgtggaggactccaatgatcatgctcctgtcttctatccccagttctat
gaagtggctgcacttggggaagatgtaccagttggcaccaaaattattcaggtttctgct
gtggacttggattctggcctgaatgggaggttttctttccacctgctaaacaagtccgat
ccaggtggccagttctctttggctagtgatgggtggctgatggttgcaggattgctggat
tatgagacggtggctcagtaccaactcattgtgattgccactgatatgggacagccccct
ctgactggcagtgccactgttttggtgactctgcaggatgtaaatgacaatgggccagag
ttcgaggcacattataacccagtggtctgggaaaacacagcttctccacaggttgtccaa
atgaatgagacctccacactgctgtatgccaaggatcgggacactgctgtgaacggagcc
cctttctcctttcgcctcctcagtgatttggatagcctgaccagcttcagcctgcaggac
ctccacaacggcagtgccgtgctcaccgccctgcgcacctttgacagggaggtgcacaag
gcgttctacctgcccatcctgatcacagacagcgggatcccgcccatgagctccaccaac
acgctgaccgtcaacatcggggaccaaaatgaccacccgcattctgctggctacatggag
tctctcatttacagctatgatggtattctcccaacgactgtgctaggccaggtcagtgcc
cctgatgctgatgactgggatcgcaaaatctaccaatttgaagggaagacatcaaggtac
tttatccttaatgataactcaggtttgctgactattaaagaaggaaccccaccaggaaca
tacaacataagagttagagtcattgatggagtctggccagatgttatctccactgtaaag
gttatagtgaaggaaatcaaagatgacgccctccgtaatgctggttctgtacgaataaaa
ggtatcacaccagaggagttcatatcccagtcccctgaaaaacaaagtaaatactaccag
atgaagaagctgctttcagaaattatctcagttcaactggaaaatgttcacattttcagt
gtactgaatagcccgagtccagtccgaggggttgatgtttggtttgcagtttatggtcca
ccttattataaagcagaaaaacttaatggcaatgtagcagcttccagagcctggctggaa
agtattctggacataaatatcacccagactggcattgatgagtgtgtgactgcagactgc
actcacagcagcggatgcatcagtaagcatgaacagaaccatgtaccaaccataaccaca
gctggaagtgtttcactggtgtctgtgacagtcctcagtcatgctgtgtgtggctgtgct
gctcgggagaatcctcatctttcctgctcctcataccagacaaacccttgtctcaatggt
ggcacatgtgtggacactgatttgggctacagatgcaaatgtgctgcaaagtttcatgga
ccagactgccagcagacaaaacacagcttcagaggccatggttatgcctggttccctcct
cttcagccctgctttgagagccgcatctccttagagtttatcactgaagttgctgatggc
cttctgttgtaccatggaccagcggcaccagggcagcctggagaacaggaaagcttcctt
gctttagaactctctggtggtgtcccgtctctgactgtgagccacagctctggtgagctt
ttcctgcagctgtcacaaaaagttaatgttgcagatcgccgctggcacaatattaaaatt
ataaatgatggaaaggaagtgaagctgatccttgacaactgtttgaatgtctcagttaga
gacaatggcagtgtcactaagaagatttcccaaatggatctgtctacctgtgaagcctct
ggagagattgtggcatctcaaagcatgggaaagctcttcagtggccatcagcccctgcag
ctgggtggagttaagaccttgccttaccgtgactcccaaaggcacttcagagggtttgtg
ggctgcatacgcaacgtcatcgttgacagtaaggtctatgatttagagcaccctgcagag
tccctgaacagcgctccaggctgtgtccttatggatgagatgtgtcagagtggtgggatg
gcctcctgtggcacccatggcaagtgtgttggtggctgggatttcttccactgtgactgt
tccccaggatatgctggattagcatgtgaaaaagttcttccagagtgggctttcggaagg
gacagctggatccattatgagccaaggcgcacccgcagcgctcgcagcacgcgggtccag
ctgctggtgcgcacccgcatctcccacagcaccctgctcagcctggcctctgccgatggc
aatggacacatccgactggaggtggtcgagggtttctttagtgttaacttcagtttgggg
gacaaaaaccactgtttgagaatgagaacattacgtataaacaatggccagtgggttctt
ctgaccatggagcgctacaacaatgaatttaccctgcgtgttaacagtggtggaggggat
caggaagtcacctctgccttgggtgtgactagatggtttgaaatggattgggcaagcatc
gtgctaggaaaccgccttcccaatcattcagagaatgatttccaaggctgtatgcgcgat
gtccagctggacggacagccgctcctcgtggagggcaggagcacagagttcggactgatt
ttgaggcggcaaggggtcaccatggggtgccactccagtgcctgcagcagccagccctgt
tacagccccttcctttgtgtagacctttggagaaaatacgagtgccggtgcccagctggg
aaagtagaagtgactgacacccttacagggctcagacactgtacctcatccccttgtgga
cattggacctgtaggaatggaggtacctgtgtggctcaatcccaagacaagactatctgc
cagtgccctgaaggttacaagggaagatggtgtgaaattagccaggtgaaggctggaaga
cctgttggactaagctctggctctattctggcaatcagcatgtgcctccttgtcttccta
gcactcttggtttcctacacagtgtggagtcagtggggaagttcagggtttcggaaagga
ggaatttaccacattcctgaagagcgtgaaagctgggaggatgttagagaaaatgtcttc
aattataatgaagaaggaggtggagaacgtgaccagaatgcttatgatatagatgaactg
aagaaacctctccataaaattccccgctcctcctcgcgagcagctgctccacactccagg
acaccaactggcccaaaaagagattcactccccaaacatgcacatcaaaagcaatcaata
tcagctgttaccagcatcccagacttcaaggaatatgtttctcaaatcatacgggatgca
gacaatgatctaaagagtcttccagctgacactattcatttttactgcttggaagggcaa
tgctctctagcagggagccttagctcattagattccatcagtggagatgaagatctgaat
tatgattgcctccaagagtgggggtcaaagtttgagaagcttaaagaactctatgcagtc
tcaaatgaaaatttataa
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integrated database retrieval system
