Agelaius tricolor (tricolored blackbird): 139587394
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Entry
139587394 CDS
T10815
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
139587394 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
atrc01002
]
139587394 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139587394 (TAF2)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139587394 (TAF2)
Peptidases and inhibitors [BR:
atrc01002
]
Metallo peptidases
Family M1
139587394 (TAF2)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
139587394 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
139587394 (TAF2)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
139587394 (TAF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
HEAT_2
Peptidase_M1_N
Peptidase_M1
HEAT_spiro
SR-25
Motif
Other DBs
NCBI-GeneID:
139587394
NCBI-ProteinID:
XP_071277774
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGYVELTIFPTVANLNRIKLNSKQC
RIYRVRVNDLEAAFIYNDPTLEVCHHESKQRNLNYFSNAYAAAVSAVDPDAGNGELCIKV
PSELWKHVDELKVLKVHINFSLDQPKGGLHFVVPDMEGNMAERGAHVFSCGYQNSTRFWF
PCVDSYSELCTWKLEYTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTIPTAASNISLA
IGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYPYSCFKTVFID
EAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQALAQQFFGCFISRMSWSDEWVL
KGISGYIYGLWMKKTFGVNEYRHWIKQELDQIVAYELKTGGVLLHPIFGGGKEKDNPASH
LHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKFQS
HMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRKRNVLELEIKQ
DYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGE
EVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQSDFMWQYQLRYERDVVAQEEAILALE
KFPTPASRLALTDILEQEQCFYRVRMLACFCLAKIANSMVSTWTGPPAMKSLFTRMFCCK
TCPNIVKTNNFMNFQSYFLQKTMPVAMALLRDVHNLCPKEVLMFILDLIKYNDNRKNKFS
DNYYRAELIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNMEKLLPSYRHTI
TVSCLKAIRVLQKNGHVPSDPALFKSYAEYGHFVDVRIAALEAVVDYTKVDRSYEELQWL
LSMVQNDPVPYIRHKILDMLTKNPPFTKNMDSPLCNEALVDQLWKLMNSGTSHDWRLRCG
AVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPESVANNQEPVISSNNHGQS
VGFQNTEDDHLIKETASSISGHQQGVKRKADMPLGSPLEPGQILEKNEDSKVKLKIRFSN
SQEEEEIDMDTVHDSQAFIYHHLNMLERPSTPGKEQSAGEINMHPVSAAPLSVFSKESNS
SKHSDHHHHHHHEHKKKKKKHKHKHKHKHKHDTKEKEKDPFVFSNSPASARSIRSPSLSD
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaagaaaggagacaaaggatttgaaagcccaagaccctataaattaactcat
caggtagtttgtatcaacaacataaattttcagagaaagtctgttgtaggttatgtggaa
ctcacaatatttcccacagtggcaaacctgaacagaatcaagctgaacagtaaacagtgc
cggatttacagagtgagagtcaatgatttagaagcagctttcatctataatgatcccaca
ctggaggtctgtcaccatgagtcaaagcagaggaatctcaactatttctccaatgcctat
gccgccgctgtcagtgctgtggacccggatgctggaaacggagagctctgcattaaggtt
ccctcagagctgtggaagcatgttgatgagttaaaagtcctgaaggtgcatataaacttt
tctctggaccagccaaaaggaggccttcattttgtggtacccgacatggagggcaacatg
gcagaaagaggggctcatgtcttttcatgtggctatcaaaattctacaagattttggttt
ccttgtgtggattcatattctgagctgtgtacctggaaacttgagtatactgtagatgct
gcaatggtggctgtttcaaatggagatttggtagaaactgtatacacccatgatatgaga
aagaagacttttcattacatgttgactattccaactgcagcttctaacatctccttggca
attggaccttttgaaatccttgttgatccatacatgcatgaggtgactcacttttgctta
ccacaacttctcccactgctcaaacataccacatcataccttcatgaggtgtttgaattt
tatgaggagattcttacctgccgctatccttactcctgtttcaagactgtttttatagat
gaagcttatgttgaagtagctgcttatgcctccatgagtattttcagcacaaatctcttg
cacagcgcaatgattatagatgaaactccactgacaaggagatgcttggcacaggccctg
gcccagcaattctttggatgtttcatatccagaatgtcctggtcagatgaatgggtgcta
aagggaatctctggttacatttatggcctttggatgaaaaaaacctttggtgttaatgag
tatcgccactggattaaacaggagttagatcaaatcgtggcatacgaactgaagactgga
ggagttttactgcatccaatattcggaggaggaaaagagaaagacaaccctgcttcacat
ttacatttttctatcaaacacccccatacactgtcctgggagtattacacgatgttccag
tgtaaagcacatcttgttatgagactgattgagaacagaattagcatggagttcatgtta
caggttttcaacaagttgttgagtctggccagtactgcttcatctcagaagttccagtca
cacatgtggagtcagatgttggtttccacatctgggtttttgaaatctatctcaaatgtc
tcaggcaaagacatccaacctttaataaagcagtgggtggatcagagtggagtggtaaaa
ttttatggtagctttgcatttaatagaaaacggaatgtattggaattggaaataaaacaa
gattacacatctcctgggactcagaaatatgtgggtcctcttaaagtgacagtgcaagaa
cttgatggctcattcaaccatacattgcagattgaagaaaacagtcttaaacatgatata
ccttgccattctaaaagcagaagaaataagaagaaaaagattccactgatgaatggagaa
gaggtggacatggacctttctgctatggatgctgattcccccttgctctggataagaata
gatcctgatatgtcagtactgaggaaggtggaatttgagcagtctgatttcatgtggcag
tatcagctgagatatgagagagatgtggtggcacaagaagaagccattctggcactggag
aagttccctaccccggcatcccggcttgccctgactgacatcctggaacaggagcagtgc
ttctaccgggtgagaatgctggcctgcttctgccttgcaaagattgcaaattccatggta
agtacatggacaggaccaccagccatgaagtcactctttacccgaatgttttgttgtaaa
acttgtccaaacattgtgaagaccaacaacttcatgaactttcagagctactttcttcaa
aagactatgcctgttgccatggcccttctgagagatgttcacaacctttgtcctaaggag
gttttaatgtttattttggatttgatcaagtataacgataacaggaagaataagttttca
gacaactactaccgtgctgagctgattgatgccctagccaactctgtgactcctgcagtc
agtgtgaacaatgaagttcgaacattggataatttaaatcctgatgtgcgacttattctt
gaggaaattacccgttttctgaatatggagaagcttcttcccagttacagacatactatc
acagtcagctgtttaaaagctattcgggtgcttcagaagaatggccatgtcccaagtgac
cctgctctcttcaagtcgtacgcagagtacgggcactttgtcgacgtccggatagcagcg
ctggaggctgttgttgattacacaaaagttgataggagctatgaagaattacagtggcta
ctttcaatggttcaaaatgatcctgtaccctacataaggcataagattttggatatgctg
actaagaatccacctttcaccaagaatatggattcccccttatgtaatgaagctttggta
gatcagctttggaaactgatgaattcaggaacttcacatgactggagattacgatgtggt
gctgtggacctctatttcacactctttggcctcagcagaccttcctgtttaccattacca
gagcttggacttgttctaaacctgaaagaaaagaaggctgtactcaatccaacaattatc
cctgaatcagttgcaaataatcaggagcctgtgatcagttctaacaatcatgggcagtca
gtaggatttcagaacaccgaggatgatcatcttattaaggaaacagcatccagcatttct
ggtcatcagcagggggtgaagaggaaggctgatatgccactcgggtctccattggagcca
gggcaaatactagagaagaatgaagacagtaaagtcaaactcaaaatcagattctcaaac
tctcaagaggaagaggaaattgatatggacacagttcatgacagccaagccttcatttac
catcatttgaatatgctggagagaccatccacaccaggtaaggaacaatctgcaggggag
ataaacatgcaccctgtctcagcagctccactctctgtgttcagcaaagaatccaactcc
tcaaaacacagcgaccaccatcaccatcaccaccatgagcacaagaaaaagaagaagaaa
cacaagcataagcataaacataaacataaacatgatactaaagaaaaggaaaaggatcct
tttgttttctctaacagtccagccagtgcacgatcaatccgttccccatcactttcagac
tga
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integrated database retrieval system
