Agelaius tricolor (tricolored blackbird): 139587418
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Entry
139587418 CDS
T10815
Symbol
COL14A1
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
atrc00535
]
139587418 (COL14A1)
Proteoglycans [BR:
atrc00535
]
Extracellular matrix (ECM) proteoglycans
Others
139587418 (COL14A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Fn3_VIN3
VWA_3
Motif
Other DBs
NCBI-GeneID:
139587418
NCBI-ProteinID:
XP_071277815
LinkDB
All DBs
Position
Unknown
AA seq
1886 aa
AA seq
DB search
MLCRYEIRNCFLLAFLAITPFFISDVQGQVSPPTRLRYNVVGPDSVQISWKAPKGQFTGY
KLLVTPSSGGKTNQLILQNTATKAIIQGLIPDQNYALQIIAFSEDKESKPAQGQFRIKDI
ERRKDTSKSKVKDPEKTNASKPAPEGSLFTCKTPAIADIVILVDGSWSIGRFNFRLVRLF
LENLVSAFNVGSEKTRVGLAQYSGDPRIEWHLNAYGTKEAVLDAVRNLPYKGGNTLTGLA
LTYILENSFKPEAGARPGVSKIGILITDGKSQDDVIPPAKNLRDAGIELFAIGVKNADIN
ELKEIASEPDSTHVYNVADFNFMHTIVEGLTRTVCSRVEEQEKEIKGTIASLGTPSDLVT
SEVTARGFRVSWTHAPGKVEKYRVVYYPTRGGQPEEVVVDGSESTAVLKNLMSLTEYQIA
VFAIYSNAASEGLRGTETTLALPMASDLQLYDVSQSSMRVRWKGVLGATGYMILYAPLTE
GLAADEKEIKIGETSTDLELDGLLPNTEYTVTVYAMFGEEASDPLTGQETTLPLSPPANL
KFSDVGHNSAKLSWDPASKNVNGYRIMYVKTDGTETNEVEVGRVSTHTLKSLAPLTEYTV
ALFSQYDEGQSEPLTGSFTTKRVPTPQHLEIDEVSTDSFRVSWKPTSSDIAFYRLAWIPL
DGGESEEVVINGDADSHVIEGLLPDTEYEVSLLAVFNDESESEVVAILGATSASATTVPS
TLTTTSATSPEPSTAVFRTGVRNLVIDDETTSSLRVTWDISDYSAQQFRVTYLTAEGDHA
EEAVRMVMVPGRQNTLLLHPLLPDTEYKVTVTPIYSDGEGVSVSAPGKTLPLSAPRNLRV
SDEWYNRLRISWDAPPSATMGYRVVYKPVNTPGPALETFVGDDINTILILNLLSGTEYSV
KVFASYSTGFSDALTGVAKTLYLGVTNLDSYQVRMTSLCAQWQLHRHATAYRVVIESLED
GKKQEVNLGGGTPRHCFFELVPGTKYKVSVHTQLQELEGPAVSITETTLPFPTQPPTTPS
TPPPPPTIPPAKEVCKAAKADLAFLVDGSWSIGDDNFNKIINFLYSTVGALDKIGRDGTQ
VAIIQFSDDPRTEFKLNAYRTKETLLEAIQQIAYKGGNTKTGKAIKHAREMLFTGEAGMR
RGIPKVLVVITDGRSQDDVNKVSREMQLDGFTFFAIGVADADYSELVNIGSKPSERHVFF
VDDFDAFTKIEDELITFVCETASATCPLVVKDGNNFAGFKMMEMFGLVEKEFSSVEGVSM
EPGTFNVFPCYRLHKDALVSQPTKYLHPEGLPSDYTITFLFRVLPDTPQEPFALWEILNE
AYEPLVGVILDNGGKTLTFFNYDYKGDFQTVTFEGPEIRKIFYGSFHKLHVVISKTTAKI
IIDCKEVGEKTINAAGNISSDGIEVLGRMVRSRGPRENSAPLQLQMFDIICATSWANRDK
CCELPGLRDEENCPALPHACSCSEANKGPLGPPGPPGGPGVRGAKGHRGDPGPKGPDGPR
GEIGVPGPQGPPGPQGPSGLSIQGLPGPPGEKGEKGDLGFPGLQGVPGASGSPGRDGAQG
QRGFPGKDGPTGPQGPPGPMGIPGAPGVPGVTGSQGPQGDVGAPGPPGAKGERGERGDLQ
SQAMVRAVARQVCEQLIQGHMARYNSILNQIPSQSVSTRTIAGPPGEPGRPGAPGPQGEQ
GSPGMQGFPGSPGQPGRPGERGLPGEKGEKGNPGVGTQGPRGPPGSTGPPGESRTGSPGP
PGSPGPRGPAGHTGSPGSAGPAGPPGYCDPSSCAGYGMGGGYGEPTDQDIPVVQLPHNSY
QIYDPEDLYDGEQQPYVVHGSYPLPSPYAQSYPSPHLAQPEFTPVQEEMEAVELRSPGIS
RFARRIAKRSARTPERTKANGKSPSQ
NT seq
5661 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtcgatacgagatacggaactgttttctcttggctttcttagccatcacacct
tttttcatcagtgatgtccagggtcaagtatccccaccaacaaggctaagatataatgta
gtgggtcctgacagtgtacagatctcttggaaagcccccaaagggcaattcactggatat
aaacttcttgtcactccaagttcaggtggaaaaacaaaccaattaattcttcaaaatact
gcaaccaaagcaattattcaaggtctcattccagatcaaaattatgcccttcagatcatt
gcattcagtgaagacaaggagagtaagccagcgcaaggccagttcagaattaaagacata
gagagaagaaaagacacaagtaaatccaaggtgaaggatccagaaaaaacaaatgcgagt
aaaccagctccggaaggaagcctgtttacctgtaaaactccagcaattgcagatattgtg
atactagtagatggttcttggagtattggcagattcaatttcaggcttgttcgactgttc
ctggaaaacctggtttctgctttcaatgtgggatctgagaaaacaagagtaggtctcgca
cagtacagcggggatccccgaattgagtggcacctgaacgcctatggcacaaaggaagct
gttctggatgcagtccgtaacctgccctataagggagggaatacattgacaggtctcgcc
ttaacttacattttggaaaacagctttaagcctgaagcaggtgcaagacctggggtatct
aaaattgggatactgattactgatgggaagtcccaagatgatgttatccctcctgctaaa
aacctacgagatgctggcattgagctgtttgctattggtgtaaagaatgcagatatcaat
gaactcaaagagattgcctctgagcctgacagcacacatgtctacaacgtggctgacttt
aacttcatgcataccattgtggaaggtcttaccagaacagtgtgctcacgagtagaggag
caggaaaaggaaatcaaaggaacaattgcttctcttgggactccctcggatttggtcaca
tcggaggtaacagccagaggcttccgggtcagctggactcatgcaccaggcaaagtggaa
aagtacagggtggtgtactaccccactcgaggaggacagccagaagaggtcgtggtagat
ggaagtgaatcaacagcagttctgaaaaacctgatgtctttaactgagtaccagatagct
gtatttgctatctactccaatgctgccagtgagggcctccgtggaacagaaaccacactt
gccttgcccatggcctcggatctgcagctgtatgatgtgtcccagagcagcatgagggtg
aggtggaagggggtcctgggtgccacagggtacatgatcctctatgctcccctcacagaa
ggattggcagcagatgagaaggagataaaaattggggagacctcaacagatcttgaactg
gatggactgttgccaaatacagaatatacagtcacagtttatgccatgtttggagaagaa
gctagtgatcccctcacaggacaagaaactacattgcctttaagtccaccagcaaacttg
aaattttctgatgttggacacaatagtgctaagctgtcatgggatcctgcttccaaaaac
gtaaatggctatcgcatcatgtacgttaaaacagacgggacagaaaccaacgaggtggaa
gttggtcgtgtttcaacccatactctgaaaagtttggcaccccttacagagtatactgtt
gctcttttctcccagtatgatgagggacaatctgaaccacttactggcagctttaccaca
aaaagagttccaactccccagcatttggaaattgatgaagtatccacagatagtttccgg
gtcagctggaagcccacctcatcagatattgctttttacagattggcatggattcctttg
gatgggggggagtctgaggaggtggtcataaatggagatgcagacagtcatgttatagag
ggtctgttgcctgacacagaatatgaagtttctctgctggcagtttttaatgatgaaagt
gaaagcgaagttgttgctattcttggagctacgtctgcaagtgcgaccacagtgcccagc
acactgaccaccaccagtgccacaagccctgagcccagcacagcagtttttagaacagga
gtcagaaaccttgttatagatgatgaaacaacctcaagtctgagagtgacatgggacatt
tctgactacagcgctcagcagttcagagtgacctatctcactgcagaaggggaccatgct
gaggaagcagtaagaatggtaatggtgcccggcagacaaaacactcttctgcttcaccct
ctgctgcctgatacagaatacaaagtcactgtaacccccatctattctgatggggaggga
gtcagtgtctcagctcctggcaaaactttgcccctgtctgctcctaggaatttgcgtgtc
tcagatgagtggtacaacagattacgtatcagctgggatgccccaccttcagcaacaatg
ggttacagagttgtctacaaacctgtcaacactcctggtcctgcattggagacctttgta
ggggatgatattaatactattctcattctaaatctcctcagtggaacggagtacagtgtt
aaagtatttgcttcatactcaacaggcttcagtgatgccctaacaggcgtggccaaaacc
ttgtatttgggtgtgacgaatttggattcctaccaagtccgcatgacaagcctgtgtgct
cagtggcagctccacagacatgccactgcttacagggtagttatagagtcactcgaggat
ggaaaaaagcaagaagtaaatcttggtggagggacacctcgacattgtttctttgagctg
gttcctggaaccaaatataaagtcagtgttcatacacagcttcaggagctggagggccct
gctgtgagcatcacggagacaacgttaccatttcctactcaaccaccaacaacaccttca
acaccacctccaccacctacaatcccacctgcaaaagaggtgtgcaaagcagccaaagct
gatctggcattcctggtagatgggtcatggagtattggagatgacaatttcaataagata
attaacttcctttatagcactgttggagctttggataagattggtcgtgatggaacacag
gtggcaataattcagtttagtgatgatcccaggacagaatttaaattgaatgcatacaga
acaaaagagactcttcttgaagctattcagcaaatagcctacaaaggaggaaatacaaaa
acaggcaaagccattaaacatgcacgagaaatgttatttacaggagaggcaggcatgaga
aggggcattccaaaggtcttggttgtcatcactgatgggcgatcacaggatgatgtgaac
aaagtctccagagaaatgcaactagatgggtttaccttttttgctattggcgtggctgat
gctgactattcagagttagttaatattggcagcaagcccagtgaaagacatgtcttcttc
gtggatgactttgatgcctttacaaagattgaagatgagctgatcacttttgtttgtgaa
actgcatcagcaacctgcccactggtagttaaagatggcaataattttgcaggatttaaa
atgatggaaatgtttggtttggttgaaaaggagttttcatctgtggaaggggtttccatg
gaacctggtacatttaatgttttcccatgttacagactacacaaggatgctctggtgtcc
cagcctaccaagtatttgcatcctgaaggtctcccttctgattacaccatcacatttctc
tttcgggtactgccggacacgccgcaggagccgtttgctctgtgggagattttgaacgaa
gcatatgaaccactggttggagttattttagataatggtggaaaaactctgactttcttt
aactatgactacaaaggagattttcaaactgtaacttttgaaggtcctgaaataaggaag
atattttatgggagttttcataagctgcatgttgttatcagcaagaccacggccaagata
attattgactgcaaggaagtgggtgagaagaccattaatgcagcagggaatattagttct
gatggcatagaagtgctggggaggatggtgagatccaggggaccaagggaaaattctgca
ccgctgcagttacagatgtttgacattatttgtgctacctcatgggccaatcgagacaaa
tgctgtgaacttcctggcttgagagatgaggaaaattgtcctgcccttcctcatgcttgt
tcctgttcagaagccaacaagggtccccttggacctcctggaccaccgggtggcccagga
gtcagaggtgccaaaggtcatcgtggtgatccaggtccaaagggaccagatggacctcga
ggtgaaattggtgttcctggaccgcagggacctcctggaccacaaggacccagtggactt
tctattcaagggcttccagggccacccggtgaaaagggagagaagggagatcttggtttt
cctggcctgcagggagtcccaggagcctcaggttcaccaggaagagatggagctcaaggt
caaaggggctttcctggcaaggatggacccacaggcccacaaggacctcctggcccaatg
ggcatacctggtgctccaggtgttccaggtgttactggaagtcaggggccacaaggtgat
gttggagctcctggtcctcctggagctaagggggaaaggggtgaaaggggggatctccag
tcccaggccatggtccgggctgttgctcgtcaagtgtgtgagcagctcatccaaggtcat
atggcaagatataactcgattctgaaccagatcccaagccagtctgtctcaactcgaacc
atcgcggggcctcctggtgagccaggtcggccaggggccccagggccacagggtgagcaa
ggatcaccaggcatgcaagggtttccagggagccctggtcagccaggaagaccaggagaa
agaggtttaccaggtgagaaaggagagaaaggcaatccaggtgttggaacacaaggaccc
cgaggcccaccaggatccacaggacctccaggagaaagtcggactggcagcccgggacca
ccaggatctccaggcccacgaggtcctgctggtcacacggggtccccgggctcagcgggt
cctgctgggcctccagggtactgtgacccatcctcctgcgctggctacggcatgggaggt
ggatacggtgagccaactgatcaagacatcccagtagtgcagttgccacataactcctac
caaatctatgaccctgaggacctttatgatggtgagcaacagccgtacgtagttcacggg
tcctaccccttaccatccccatacgcccagtcctatccatcacctcatcttgctcaacca
gagtttactcctgtccaagaagagatggaagccgttgagctgaggtccccgggaatcagt
cgcttcgcaaggaggatagccaaaaggagtgccaggaccccagaacgcacaaaggccaac
ggaaaaagcccctctcaatga
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integrated database retrieval system
