Agelaius tricolor (tricolored blackbird): 139587886
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Entry
139587886 CDS
T10815
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139587886 (PPFIBP1)
Membrane trafficking [BR:
atrc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139587886 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
SAM_PNT
Sas-6_C_CC
Motif
Other DBs
NCBI-GeneID:
139587886
NCBI-ProteinID:
XP_071278672
LinkDB
All DBs
Position
Unknown
AA seq
1038 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGGLRALHLVEDLRGLLE
VMEADEREGLRCQVPDSTAEALIEWLQSQMTNGHISGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTTLETQKLDLMAEISTLK
LKLTSVEKDRLDYEDRFRDTEDLIQEINELRLRVGEMDNERLQYEKKLKTTKSLMAKLSS
MKIKVGQMQYEKQRMEQKSQMLKDELSALKDKLEQKEAEVKRLHEKLVSKLKGEGIEILD
RDENCKKKLKDKNIEVQKMKKAVESLMAANEEKDRKIEELRQSLNRYKKVQDMVILAQGK
KGKETESEDLNSGTVSVGLLDTPSLTDPEKSPSPTPVTASPIHDEFNVNIHEENSLQIHT
SILQISIPSFSSASKSSETVAERLKTHPRPDPASEMSEGRSTGSSPETHLCDSPVISTLQ
KSSSLSSLRKEASDVDRDCAQKPAEQVKPPVEGNNFATLPPKSPSHGGTGDEDSFGTRKA
RSSFGRGFFKIKNNKRTASAPNLDRSRSASAPTLAETEKGSADHLDLAGLPPRPKEADSL
LMTPPSPDSRKKARGIKKLFGRLKRSQSTTFNPDDMSETEFKRGGTRATAGPRLGWSRDL
GQSHSELDMPFAKWTKEQVCNWLQDQGLGSYINNGRHWILSGQTLLQASQQDLEKELGIK
HPLHRKKLQLALQALGSEEENNHGKLDYHWVTRWLDDIGLPQYKTQFDEGKVDGRMLHYM
TVDDLLSLKVISVLHHLSIKRAIQVLRINNFEPNCLRRRPSDENNVTPSEVTQWTNHRVM
EWLRSVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLL
VGQEAQQQKREAMESPDYVLLTATAKVKPKKLTFSNFGNLRKKKQDDVEEYVCPMELGRA
SGSASKKGFKPGLDMRVYDDDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDEMFK
DFATRSPSTSITDEDSNV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgcaagtgacatgctcgctgcagccctggagcagatggatggcattata
gcaggttccaaggctctggaatactccaatggcatttttgactgccagtcccccacttcc
ccattcatggggggcctgcgggcgctgcacctcgtggaggacttgcggggcttgctggag
gtgatggaggcggacgagagggaggggctgcgctgccaggtcccagactccacggcagag
gctctcatcgaatggctccaaagtcaaatgactaatggacacatatccgggaatggagat
gtttatcaagaaaggctggctcgtctggaaaatgataaggaatctcttgttctgcaagta
agtgtgcttacagaccaggtggaggcccaaggagagaagatccgggatctggagttctgc
ctggaggagcacagggagaagctgaatgccacagaggagatgctgcagcaggagctttta
agcagaacaacccttgaaactcagaagctggatcttatggcagagatttccactctgaaa
ttaaagcttacatctgtagagaaggatagattggactatgaggacagattcagagacaca
gaggatttgatccaggaaataaacgaattgcggttgagggtgggagaaatggacaatgaa
agactccagtatgagaaaaagctgaaaacaaccaaatctttaatggccaaactttctagc
atgaaaatcaaagtgggtcagatgcagtatgaaaagcagcggatggagcaaaaaagccag
atgctaaaggatgagctgtcagctctgaaagacaaactggagcagaaggaagctgaggtg
aaaaggttgcacgaaaaattggtttccaagctgaaaggagaagggattgaaatactggac
agagatgaaaattgtaaaaagaagctcaaagataaaaatatagaggtacagaaaatgaag
aaggcggtagaatctctaatggcagcaaatgaagagaaggaccggaagatagaagagctt
cggcaatctctgaataggtacaagaaagtccaagatatggtgatactggctcaaggtaaa
aaaggcaaggaaactgaaagtgaagacttgaattcagggactgtatccgtgggtttattg
gacacaccaagtctgactgacccagagaaaagcccatccccaaccccagtaacagcatct
ccaatccacgatgagttcaatgtgaacattcatgaagagaattccttacagatccacacc
agcattttacagatttcgatcccttccttttcatctgcatccaagagctcagaaactgtt
gcagagagactgaaaacacaccctaggccagatcccgcaagtgaaatgagtgaaggaaga
tcaacaggttcctcccctgaaactcatctgtgtgatagtccagtgatttccacactgcag
aagtctagcagtctgagcagtttgaggaaagaggcatctgatgtggacagagactgtgca
cagaagccagcagagcaggttaaacctcctgtggaaggcaataattttgcaaccctccct
cccaagtctccttctcacggtggcacaggtgacgaggacagttttggcacccgcaaagcc
agatcttcctttggccggggctttttcaagataaaaaataacaagaggactgcaagtgcc
cccaatctggatcgcagtcgaagtgccagtgcacctaccttagctgaaacggagaaggga
tctgcagaccacttggatctggctggcttgccccctcgcccaaaggaagcagatagtttg
ctgatgacaccaccttctccagattccaggaaaaaggccaggggaatcaagaagttgttt
ggaaggcttaaaaggagtcagtccaccacattcaacccagacgacatgtccgagacagag
ttcaagagaggagggacgagagcaaccgcggggcccaggctgggctggtctcgggacctg
ggccagtcccacagtgagctggacatgccatttgcaaagtggaccaaggagcaggtttgc
aactggctccaggaccaagggcttggctcctacatcaataatggcaggcactggatattg
tctgggcaaacacttctgcaggcttctcagcaggatctggaaaaggagcttgggataaag
caccctttgcataggaagaagctccagcttgctctgcaggcactgggatctgaagaggag
aacaaccatggaaaactggattaccactgggttaccaggtggctggatgacattggcctg
ccccagtataagacccagtttgatgaggggaaggtggatggccgcatgctccattacatg
actgtggatgatctgctctccttgaaggtcatcagtgtccttcaccacctcagcatcaaa
agagccattcaggttttgagaataaacaactttgagcccaactgcctgcgccggaggcca
tctgatgagaataatgtgacaccctctgaggtcacccagtggaccaaccaccgcgtgatg
gagtggctgcgctccgtggatctggcagagtacgcgcccaacctgcggggcagcggagtg
cacggggggctgatggttttggagccccgtttcaatgtagaaaccatggcccagctgctg
aacatcccccccaacaagacgctgctgaggcggcacttggccactcatttcaacctcctg
gtggggcaggaggcccagcagcagaagcgtgaggccatggagtccccagactacgtcctt
ctgacagcaactgccaaagtcaagccaaagaaacttaccttcagcaattttgggaacctg
aggaagaagaagcaggatgatgtggaagagtatgtgtgtcctatggagctggggagggca
tctgggagcgcatcgaagaagggctttaagcctggcctggatatgcgagtatatgatgat
gatgatttggacaggctggagcagatggaagattcagaagggacggtgaggcaaatagga
gcattttctgaaggcatcaacaacctgacacacatgctgaaggaagatgaaatgttcaaa
gactttgccactcgctctcctagcaccagtataacagatgaggactccaacgtgtga
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integrated database retrieval system
