Agelaius tricolor (tricolored blackbird): 139587912
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Entry
139587912 CDS
T10815
Symbol
SCUBE1
Name
(RefSeq) signal peptide, CUB and EGF-like domain-containing protein 1 isoform X1
KO
K24468
signal peptide, CUB and EGF-like domain-containing protein 1/3
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
139587912 (SCUBE1)
Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
139587912 (SCUBE1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
Ephrin_rec_like
EGF_3
EGF_CA
CUB
EGF
hEGF
TNFR_c6
Orbi_NS3
SNaCT8
Motif
Other DBs
NCBI-GeneID:
139587912
NCBI-ProteinID:
XP_071278722
LinkDB
All DBs
Position
Unknown
AA seq
1133 aa
AA seq
DB search
MLRGRCGSLRAPCRGGSGSEPGRSASRGSAARPASRHRPGHGPAPRRPSTPSPGRRGAGA
AAGAALPPARPGTAPAAGAPANQRGAVRASAPAAPRGRPRARPLSQTGTGDRIIIMGTVC
FSRRCCLLFALAWAGRLAGGSGGADVDECAEATDDCHIDAICQNTPKSYKCICKPGYKGE
GKQCEDIDECENDFYNGGCVHECINIPGNYRCTCYDGFMLAHDGHNCLDVDECLDNNGGC
QQICVNTMGSYECQCKEGFFLSDNQHTCIHRSIEGMNCMNKDHGCAHICRETPKGGVACE
CRPGFELAKNQKDCKLTCNYGNGGCQHTCDDTDTGPVCGCHQKYALHSDGRTCIEKDEAA
IESSEYNATSVADVDKRVKRRLLMETCAVNNGGCDRTCKDTATGVRCSCPVGFTLQPDGK
TCKDIDECLVNNGGCDHFCRNTVGSFECSCQKGYKLLTDERTCQDIDECSFERTCDHTCI
NYPGSFECLCHKGYTLYGLTHCGDIDECSISNGSCDFGCLNTMGSYECVCPPGKKLHWNK
KDCVEMVKCLPNAKPTPKAQLVCSKTGGIESCFLSCPSNTLFVPDSENSYTLSCGVPVQH
GKAQPRRNSTLPSCSDSPAPPIKQKARFKIKDAKCHLRPRSKEKTKDSGKQAVSGGQFPC
TDNCQVTFVNLKCDSSKKKRRGRKSPSKEVSHITAEFEVEMKSEEVSDTCNIDCVRKRME
QKLQTAIKTLRKSINKQQFYIQFSGTEYEVAQKPAKATEGHEACSTGQVLQDGKCVTCST
GTFYSGEHKQCVPCSPGTYQDTEGQLTCEPCPSNDGQGVAGARNVSECGGQCSPGHYSSD
GFKPCTVCPLGTYQPEPGRTLCFPCGGGLVTKYEGAVSFQDCETKVHCSPGHYYNSTTHR
CIRCPVGTYQPEFGQNYCITCPGNTSTDFDGSTNVTHCKNQHCGGELGDYTGYIESPNYP
GDYPANVECIWNINPPPKRRILIVVPEIFLPIEDECGDVLVMRKSASPTSITTYETCQTY
ERPIAFTSRSRKLWIQFKSNEGNSGKGFQVPYVTYDEDYQQLIEDIVRDGRLYASENHQE
ILKDKKLIKALFDVLAHPQNYFKYTAQESKEMFPRSFIKLLRSKVSRFLRPYK
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggggtcgctgcggctccctacgcgctccctgtcggggcggcagcggcagcgag
ccgggccgctctgcctcgcggggcagcgccgcacgccccgccagcaggcaccgcccgggg
cacggaccggctccccgccgcccgagcaccccctccccggggcggcggggtgcgggggca
gccgcgggggcggctctgcccccggcccgccccggcaccgcccccgccgcgggagccccg
gcgaatcagcggggcgctgtcagggcgtcagcgccggcggctccgcgcggccggccccga
gcgcgtcccttatcgcagacaggcaccggggatcgcatcattatcatgggcactgtttgc
ttttcgcggcgctgctgtttgcttttcgctctcgcctgggccggcaggttggcgggaggc
agcgggggcgcagatgttgacgagtgtgcagaagctacggatgactgtcacatcgacgca
atttgtcaaaacacaccaaaatcctacaaatgcatctgcaagccgggctacaaaggggaa
gggaagcagtgtgaagatatcgatgagtgtgaaaatgacttctacaatgggggttgtgtc
catgagtgtatcaacattccaggcaactacaggtgtacgtgctatgatggattcatgtta
gcccacgatggccacaactgtcttgatgttgatgaatgtctggataacaatggagggtgc
cagcagatttgtgtgaatactatgggcagctacgaatgtcagtgcaaggagggctttttt
ctgagtgataaccagcacacctgcattcatcgctccattgagggtatgaactgtatgaat
aaagatcatgggtgtgcacacatctgccgggagacacccaaaggtggggttgcctgtgaa
tgtagacctggctttgaacttgcgaaaaaccagaaggactgcaaattaacctgtaactat
gggaatggaggctgccagcacacctgtgatgacacagatactggccctgtgtgtggctgt
catcagaagtatgccctgcactcagatggccgaacctgcattgagaaggatgaggctgca
attgagagttctgagtacaatgccacgtcagtagctgatgtggacaagcgggtgaaacgg
cggctacttatggaaacatgtgctgtcaataacggaggctgtgatcggacttgcaaggat
accgcgacaggggtgcgctgcagttgcccagttggatttaccctgcagcctgatgggaaa
acgtgcaaagatattgatgagtgtttggtaaacaatggtggctgtgaccatttctgccga
aacacggttggcagctttgagtgcagctgccagaaaggctataaactgctcacagatgaa
aggacctgccaagatatagatgagtgttcctttgaacggacctgtgaccacacctgtatc
aactaccctggaagctttgagtgtctctgccacaaaggctacaccttgtatggactgacg
cactgtggagatattgatgaatgcagcatcagcaatggtagctgtgactttgggtgtctt
aataccatggggagctatgagtgtgtctgcccacctggaaagaaactgcactggaataaa
aaggactgtgttgagatggtgaaatgtctcccaaatgccaaaccaactcccaaggctcag
ctagtgtgcagtaagacaggaggcatagagagctgcttcctgtcatgcccatccaatact
ctttttgttccagactcagagaacagctacacgctgagctgcggcgtccccgtgcagcac
ggcaaggcacagcccaggcgcaactccaccctgcccagctgctcagattctccagcccct
ccaatcaagcagaaagctcgttttaaaatcaaagatgcaaaatgccatttacggcctcgc
agcaaagaaaaaaccaaagattctgggaagcaggctgtttcaggaggtcagttcccctgt
acagacaactgccaggtgacctttgtgaacctcaagtgcgattcttccaagaaaaaacgc
cgaggccgcaagtcgccatcaaaagaagtgtcccatatcactgcagagtttgaagtggag
atgaagtctgaagaagtctcagacacctgtaacattgactgtgttcggaaaaggatggag
cagaagctgcaaactgcaatcaaaacattgaggaaatctattaataaacagcaattttac
attcagttttctgggacagaatatgaagtggctcagaagccagctaaagctactgaaggg
catgaagcgtgcagtacagggcaagtactgcaggatggaaaatgtgttacctgcagcacg
ggcaccttctatagcggagaacacaagcagtgcgtcccgtgctcgccaggaacctaccag
gacacagaaggccagctcacctgtgagccttgccccagcaacgatggccagggagtagcg
ggcgcccgcaacgtctcggaatgtggagggcagtgttctcctgggcactactcttcagat
ggttttaaaccttgtacagtctgtcctcttggtacatatcagcctgaaccaggaaggacc
ctctgctttccctgtggcggtgggcttgtgaccaaatacgaaggtgctgtttcctttcaa
gactgtgaaaccaaagttcactgttctcctggacactactacaactccacaacacacaga
tgtatccggtgccctgtgggaacataccagcctgagtttggtcagaactactgcatcacc
tgccctggcaacaccagtacagattttgatggctccaccaatgtcacacactgcaaaaac
cagcactgtggaggagaactgggggactacactggctacattgaatcacccaactatcct
ggagactacccagctaatgtggaatgcatttggaatataaatccacccccaaagagaaga
atactcatcgtagtacctgagatatttctcccaattgaagatgaatgtggcgatgtttta
gtaatgagaaaaagtgcttctcctacttcaattactacgtatgaaacatgtcagacctat
gagagacctattgcatttacctcaagatcaaggaaactctggattcagttcaagtcaaat
gaaggaaacagtggcaaaggatttcaggttccctatgtgacttatgatgaggattaccaa
caactaatagaagacattgttcgagatggccgattatatgcatcagaaaaccatcaagaa
atcctaaaggacaagaaactgattaaagctctctttgatgtactggcacaccctcagaac
tatttcaagtacacagcacaagagtcaaaagaaatgtttccaagatcatttataaagcta
ctgcgatcaaaagtttccaggtttctacgaccatacaaatag
DBGET
integrated database retrieval system
