Agelaius tricolor (tricolored blackbird): 139588075
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Entry
139588075 CDS
T10815
Symbol
XRCC6
Name
(RefSeq) X-ray repair cross-complementing protein 6
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
139588075 (XRCC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139588075 (XRCC6)
03400 DNA repair and recombination proteins [BR:
atrc03400
]
139588075 (XRCC6)
Spliceosome [BR:
atrc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139588075 (XRCC6)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
139588075 (XRCC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku_N
Ku
Ku_C
SAP
Motif
Other DBs
NCBI-GeneID:
139588075
NCBI-ProteinID:
XP_071279114
LinkDB
All DBs
Position
Unknown
AA seq
612 aa
AA seq
DB search
MAGWGSFYRGDGLEEEEEEQQEEEEGPEAVAEQRFSGRDSLIFLVDASKAMFESDGEAET
PFDMTIQCIRNVYTSKIISSDRDLLSVVFYGTENNKNSADFKHIYVLQELDNPGAKRVLE
LDQYRGEEGRALFRESFGHSADYSLGEALWACSNLFSDVRVRLSHKRIMLFTNEDDPHAN
DNAKAKLARTRAGDLRDTGIILDLMHLKKPGGFDISLFYRDIINVAEDEDLGIQPRESEK
LEHLMKKVRAKETKKRALVRLNLHLGKDVALSVGVYNLIQKAYKPHPVKLYRETNEPVKT
KTRMFSGKTGSLLLPSDTKRAQTYGNRQIVLEKEETEELKQFDSPGLVLIGFKPLSMLKQ
HHHVRPSQFIYPEESLVRGSTTLFNALLMKCLEREVMMLCRYTPRRNVPPRFVALVPQEE
ELDEQKVQIAPPGFHMIFLPYADDKRNVDVTDNVPASQEQVDKMKEIIQKLRFKYRADSF
ENPVLQQHFRNLEALALDMREPEQAEDLTMPKSEQMSHRLGNLVDEFKQLVYPPDYNPDA
KAVKRKQASDGQTEKRPKVEVSEDELRSYVQKGTLGKLTVPILKDACRFLGLRCGSKKQE
LVDSLTDYFNEH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggcgggctgggggtcgttctaccggggcgacgggctggaggaggaggaggaggagcag
caggaagaggaggaagggcctgaggcggtcgcggagcagaggttttcgggccgggacagc
ctcatcttcttggtggatgcctccaaggctatgttcgagtccgacggggaggcagagact
cctttcgacatgaccatccagtgcatccggaatgtgtataccagcaaaattatcagcagt
gacagggacctgttaagcgttgtattctatggtacagaaaacaacaaaaattcggcagat
ttcaagcacatttatgttctccaggagctggacaatccaggtgcaaagcgtgttctggag
ctggaccagtacaggggagaggaaggccgggccctgttccgggagagctttggccacagt
gctgactattccctgggtgaggcgctctgggcctgctccaacctcttcagtgatgtccgt
gtcaggctgagccacaagaggatcatgctcttcaccaacgaggatgacccccatgccaat
gacaatgccaaagccaagctggccaggaccagagctggtgatctgagggacacaggtatc
atcttggacctgatgcacttgaagaagcctggagggttcgatatctcattgttctacagg
gatattataaatgtagcagaggatgaggaccttgggatccagcctagagagtcagagaaa
ctggaacatctcatgaagaaagtacgagcaaaggagacaaagaagagggctttagtcagg
ctaaatctgcatctgggcaaagatgtggccctttctgttggtgtttacaaccttattcaa
aaagcttataaaccacatccagtgaagctttatcgggaaactaatgaacctgttaaaacc
aaaacaaggatgtttagtggaaaaacaggcagcttgctcctgcccagtgacactaaaagg
gctcagacatacggaaaccgacagattgtgctggagaaagaggagacggaagaattaaaa
cagtttgattctccaggtttggttctgattggcttcaaaccactttcaatgctaaaacag
caccaccatgtcaggccctcccagttcatctatcctgaggagtccctggtgagagggagt
acaactctgtttaatgccctactgatgaagtgcttggagagggaggtgatgatgctgtgc
aggtacacccctcgccggaatgtccctcctcgctttgtggccctggttccccaggaggaa
gagctggatgagcagaaagtgcagatagcccctccaggtttccacatgatttttctaccc
tatgcagatgacaaacgtaatgttgatgttacagacaatgtgccagccagccaagagcag
gtagacaaaatgaaggaaataattcagaagctacgattcaaatacagggctgacagcttt
gagaacccagttttgcagcagcacttcaggaatttggaggctttggcgctggatatgagg
gaaccagaacaagctgaggatcttacaatgccaaagtctgaacagatgagccacaggctg
ggcaacctggtggatgagtttaagcagctggtttatccccctgactacaatcctgatgcg
aaggctgtaaagcgaaaacaagcttctgatggtcaaactgagaagaggcccaaggtagaa
gtctcagaagatgagctgcggagttatgtgcagaagggcactctaggcaagctcactgta
cctatcctgaaggatgcatgcaggtttttggggttgagatgtggaagcaagaagcaggag
cttgtggattctttaactgattactttaatgagcactaa
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