Agelaius tricolor (tricolored blackbird): 139588183
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Entry
139588183 CDS
T10815
Symbol
CFAP54
Name
(RefSeq) cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
atrc03037
]
139588183 (CFAP54)
Cilium and associated proteins [BR:
atrc03037
]
Motile cilia and associated proteins
Sperm associated proteins
139588183 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CFAP54_N
Ribonucleas_3_3
Motif
Other DBs
NCBI-GeneID:
139588183
NCBI-ProteinID:
XP_071279342
LinkDB
All DBs
Position
Unknown
AA seq
3190 aa
AA seq
DB search
MLSAMPIERGCGKAALCGTSRLAHGGPSGPLPAAVARRQRRARAGPGRAVPSMAQPAGPQ
APHAAFFGPVARGNPVVDSFEAELRRVLSSLRRLRGAGEAKPPQHDLHRHGANTLFNIWI
KYKPRLPEWYYNERLVKVGDTLAQIKEYKLALHQCYERYLQQFVSVNLDDVMDDVQRFKS
AFFPNGVRDKNAALMFHVLQARNVCIYQMVCSRDRNLQNGESLQTCLNALTSLRLTMQVA
LPQEDLCWLIYNGTIHIYTICRHLMVMGHSAKVLEYLLWASICMESSIPLLSVHYLTWRA
TLYTAVSQCYFDCQAGIHGEIFARRGLIKIDELKQLEDISSSLEHTETEKIFREATLKMS
VMIFKRAVYESRKKSNGFRRESRVNPRKAVNVSWPRTTTERLLVAMFDGAAAQFLAILEA
LSDPNRNLLPPHPPVPDEVQIPEVTSELFSAGLEILSGGESSGTNHFGIINPSSSLLQLM
LAGEEGVSGDAAVKFVKLAFSYEEWNVFYSAFEFVDNFLQAQDNPTWKKAELELKLLTLM
QPIVLPGRFERSFSITDGGKSKEGSTRRGSEKTQTIRKESLKPGDPFRDLMILATTTFSY
VSTFEQNVHPGKEILVDVVMCLWQKCKTELQQIQKSGSHCLEYIHKHQAHQWVHILWIMN
KIIEKSNIADTNVMFAEITLCLAAILENVADSTSESKDKEGGSTSLSQDETCDMPEILMK
TPTEQLQIAYEVLEKAVNDMNTSRLMTILPDGKSIFDSCCTKVSLNDQNLTSVLGCGDDK
TGTDNGFVTDLHLELIQAQHRVAVKLLKITQGAQVVHRSPKSSKSQEKNIEDFQYLSEEL
IMKKIKRNKLSRAIFLMQKSAQKFPEDLTTASQRQLLEEALTLIEQVEAEQNALYRSLKE
SMSSKKKSRTPPPPLLLSRSHCSMTFKPAPFDSDIQVSWYCILGCVAGGSNTKVRLNSNK
LQNSGEQILADGKILLEVQGLDANEKYIFAVAAYSSDGKLIGDAIGQMTKPILAYPPLSA
ITVRAYLTQVAYQMGNFRLARAVFSPMWDYFVSESFPQPPNAAVISASSHFTISEKRLHF
EAVSQTSPITLHLFLRNIFAVSDINVMEGALFCDSICSNEIFYKEQVARLAECERMTVAI
ELSNWLNDPSYALQSVVQCYGLLAPLIYHKIFSVPVVQILIKCLAVLQEIPSSTLQRRQE
GCYDSIQHMIACASYHTAKVLHSWKEYELSAIIINYGKKLLISPGVSPGQSGDVKTEETR
TGKAVKRRSSRASHLAAMAKAAENLNSLESSLLKLTEPGPGTQLTGKESPLLLYPVISCW
PSDRAYREVLKFKGHTRFLEFFVQLLHKVMNEEKFQSVLEWAESVENNLKRRNESFLGTD
GISAQARSLTLGESTSAAEVQKGKNTSPSGKPKASPSKKPTKQAMPKKGPLREYLMKNPD
TMKSSETQNKAKDKLKKLAHETLVMLLTKYVIRSHFCQMCLEEMPWKSQMNIYLALAHYH
LFKKNLEGQYNIGISGSQHLDSYNILDPEIFSLNNSGTVLAREAADDNTGKPTPSLPEKS
EETETQTSTGKSPKTRNKQSRTPRSRTAKTDKQDQVPSTALLLKHFTSIFLHLKRAVVLA
HRGGHWTLLQNACRDLWSYTQEFQVIANQSHSHMGAFPITWDLLCNTIWLPFYFASDMII
DMIIDLQASSSLKIVDPEGEFCIPSCLGGIADENGGSNLHPQPPIDDVNVVDLRWICNLV
LKTIELLYHMKKWEALVHIAVQFNIFTHERFTEQVSPLLVYAQRQLLERIQQFSGSDSHE
SHFTKYLSDGAQKMRCRNYIGYKLQLPVARSSSEGVFPGCFFKPPTNNDSTALDHNQAKA
LVCVPLDVNDTLKCFKETLEKSKYQSRALRHSRKLLSLFLAHTQENAGRAISSPISSSRK
LKFSMVDEVIFLPTPCDLSQEKYNFSSMVEGRPIPKSHLSVIISSYEQTIGILEMSSQRD
LKVQALHELGNLHFYAGNKRAAFKYWCQSLDETLNIADALNTWQELSFLKDATDCFAVGR
STDMSEKFLSQAGAWGCLHAAVLVAKIAQYITTSKIRLRTKYCYFSAILFKTLFRASLPH
PTSDCDFAQYETNILIPGIDLFSDRYRADISTVVASLNFIIFELHSVKQNLIILPLFTLY
QYIVSEICKDPAKCIEGRILKIKVLTDIGFFTEAFHELSLLISGERIPWKIPAGYRCTEQ
VQASQKFDTSKPLMTDTNLQVLEDTFNWSLSLTVAPLCNPQMMNKLTLAKMHLIICLSAT
INKIPEKVEKNLYFVDNNNLPEPSKTTASNVKVDADQDSRQQEQRDRMVHLVDCKDELNM
AMLKGILLTEAEETLSCLVQDIQEKYDGDISRYSVEDLEALIEAKLELASISYQRHQAPL
SAALAFSAIRLLQDARVFCVDVAHFQEEKDEREHLDSTTEGVSLPPHVTAQGHVNVHLWL
RCRAMLVTGLMAQIHGIGEKKGNDVAERRSVIKEVILEAEAFGDIETQAEMMVQAAILDL
QEKRPVADIKLLLQNIIGLLQEDTFISLPASLTFVKSLLLLADILPLQVVEDSEHCSSAV
EPFNLLVLAHKLTIKAIFDCGELIEWQGEDSTLTCLVLPSKNIYLPHINLLALVKMKIGC
TLAEKVASTAARHPLQWLHALRHLESALNLCRAAAAKKIELEVELLFQMGKVKRQTRETG
SKSSQAVETLFEAIKLSQQHDQKYELVRRSYLEIALSYFRFAESNEDESETDNSLPSKFS
TYSEDRASEEAMKSEVYKAQAWIAIRAASQVSEAMIASQLLIGMKSVKDLNMKDEVQQKI
PEFASMDLFSSYRDFISDGYNVIISETPEVSSAENKEITEDSQSESEGTESLVTKASQKK
DTITWVLMIRYHNHLKRIYSTNLSGAGSLSGRDGHLGLISNTGIVLRIAEMHSFFEKYLL
EYSLCCPENFPAELHDVDIPLSNTTDSSEMSIDMSETTSEVSHVRAASPVSVVAEYEKTE
SRATVAPDKEINIQWYIPPMAKESNDRETKVLLLYAYNTNPIRISDISSTSMFSGYLWIP
LARIISLREKLSDLKEQIELSMQASKIFSTSGRTSFHEQNETLKIIPSFKPKRSDAKVHL
DGKTEEIAKRCLSEVKALLSVDPALSSPLTEIPFDVTLQSITNLKDMFDLANGCIISDGS
LFNWMISLLH
NT seq
9573 nt
NT seq
+upstream
nt +downstream
nt
atgctaagtgccatgcctattgaaagaggctgtggaaaagccgccctctgcggtacctcc
cgccttgcccacggcggcccctcgggcccgctgcccgcggccgttgcccggagacagcga
cgcgcccgggccgggccgggccgtgccgtgccgagcatggcgcagcccgccgggccgcag
gccccgcacgccgctttcttcgggcccgtggcgcggggcaacccggtggtggacagcttc
gaggccgagctgcggcgcgtcctgagctccctgcggcggctgcgaggcgcgggggaggcc
aagccgccgcagcacgacctgcaccgccacggagcaaatactttgtttaacatttggatc
aaatataagccacggctaccagagtggtattacaatgaaagacttgtgaaagttggtgat
acccttgctcagatcaaagaatataagctggcacttcatcagtgttacgaaagatacctt
cagcagtttgtttctgtaaaccttgatgatgtcatggatgatgtgcagcgctttaaatct
gccttttttccaaatggtgtcagagacaaaaatgcagcacttatgttccatgttttgcaa
gcaagaaatgtttgcatttatcagatggtttgcagcagagacagaaatcttcagaatgga
gagtccctgcagacttgtctcaatgccttgacctcattacgactcactatgcaagtggct
ctgcctcaggaggatttgtgttggcttatctacaatggtactatccatatttacaccata
tgcagacatttgatggtgatgggtcattctgctaaggtcctggaatatttactgtgggcc
agtatatgtatggaatcatccattccactcttatctgtgcattatttgacgtggagagcc
accctatatacggcagtttctcagtgttattttgattgtcaagccggcattcacggagag
atatttgctcgccgtggtttgattaagattgatgaactgaagcaattagaagatatcagt
tcttctctggaacatacagagacagaaaagatttttagagaggccactctaaagatgtca
gtaatgattttcaagagagcagtatatgaatccagaaaaaagtcgaatggctttcgacgg
gagtcaagagttaacccgagaaaagcagtaaacgtgtcatggcctcgcaccactaccgag
cggctgctggtggcaatgtttgatggtgctgcagctcagttccttgccatcctggaagca
ctgtctgatcctaacaggaatctattgccccctcatcctcctgttcctgatgaagtgcaa
attcctgaggtcacttctgagcttttttctgcaggcctagaaatcctctcaggtggagag
agcagtggcaccaatcactttggtataattaatccatcatctagtcttctgcagttgatg
ctagcaggagaagaaggggtatctggagatgctgctgtgaaatttgtaaaattagctttc
agctatgaagagtggaatgtgttttattctgcgtttgaatttgttgataattttcttcag
gctcaagataacccaacatggaagaaagctgaactagaactcaaacttcttacactcatg
caacctatagtactcccaggaagatttgaacgtagtttttctattactgatggcggtaag
agcaaagaaggcagcacacgtcggggttctgaaaagacacagacaattagaaaggaatcc
ttaaagcctggagatcctttccgtgatcttatgattttggcaacaacaacgttttcctat
gtctccacatttgagcagaatgtccatcctggcaaagaaatacttgttgatgtagtaatg
tgtttgtggcagaagtgtaaaacagaacttcagcaaatccaaaagagtggaagtcactgc
ttagaatatatccacaaacaccaagctcaccaatgggttcatatactctggataatgaat
aaaataattgagaagagcaacatagcggacactaatgtaatgtttgcagagataacttta
tgtctagctgcaatactggaaaatgtagctgattctacaagtgaatctaaggacaaagaa
ggaggaagtacttctctttcacaagatgagacctgtgacatgcctgaaatactgatgaaa
acgcctacagaacaattacaaattgcttatgaagttcttgaaaaagcagtgaatgacatg
aacacatctcggttaatgaccattttaccagatggaaagtcaatatttgacagctgctgt
acaaaggtgagcttaaatgatcagaatttgacttctgttttgggatgtggtgatgataaa
acaggaacagataatggttttgtgacagatttacacttggagctcattcaggcccaacat
cgagtagctgtgaaacttcttaaaattacacaaggtgctcaagttgttcacagaagtcct
aagtctagtaaatctcaagagaagaatattgaagatttccaatatttatcagaggaactt
ataatgaaaaaaattaaaaggaataagctatccagagcaatctttttgatgcaaaagtct
gcacagaagtttcctgaagacttaactactgcttcccaaaggcagctactggaggaagca
ctaactttaattgagcaagttgaagctgaacaaaatgcattgtatcgcagtctcaaagaa
tctatgagcagcaagaaaaaaagcaggactcctcctcctcctctgttactttctagatca
cattgctccatgacatttaaaccagccccatttgattcagatattcaggtttcatggtac
tgtattttgggctgtgtagcaggaggaagtaatacgaaagtaaggttaaatagtaataaa
cttcaaaattcaggagaacagatactggcagatgggaaaattctcttagaagtccaaggg
ttagatgccaatgagaaatacatatttgctgtggcagcatattcttcagatggaaaactt
attggggatgccattgggcaaatgactaagccaatccttgcctatccaccgctttctgct
attactgttcgagcatatctaactcaggtagcctatcagatgggcaacttcagattagcc
agagcagtattttcaccaatgtgggattactttgtttcagagtcttttccacagcctccc
aatgcagctgtaatttctgcaagtagtcatttcactatatctgaaaaaaggttacatttt
gaagctgtatctcagacttctcctattaccttgcacctctttttgaggaatatatttgct
gtttctgacattaatgtcatggaaggagcactcttctgtgattccatctgttccaatgag
atattttataaggagcaagtagctagattagcagaatgtgaaagaatgactgtggcaatt
gaacttagcaactggttgaatgatccaagttatgcactgcagtctgttgtacaatgttat
ggtctcctcgccccacttatttatcacaagattttttcggtgccagtagttcagatcctc
attaaatgcttggctgtcctccaagaaattccaagttctactttgcaaaggagacaggaa
ggatgttatgacagtattcagcatatgatagcttgtgcttcatatcatacagcaaaggta
ctacattcatggaaagagtatgaactttcagcaattatcattaactatgggaaaaagttg
ttgatctcaccaggagtttcacctggccagtcaggagatgtgaaaactgaagaaacacgc
actggcaaagcagtaaaaagacgttcctcaagggcatcccatttagctgcaatggcaaaa
gcagcagaaaatctaaattctcttgaatcaagtctactcaaactgacagaaccaggtcct
ggaacacagcttacaggaaaggaatctcctttgttactctaccctgtaatttcgtgttgg
ccatcagaccgtgcttatcgagaagtgcttaaattcaaaggccacacacgtttccttgag
ttcttcgttcaacttttgcacaaagtcatgaatgaagagaagtttcagagtgttctggag
tgggcagagagtgtggaaaataacttgaaaaggaggaatgagagcttcctcggtactgat
ggaatttcagcacaagcaagatctctcactctgggagaaagcacaagtgctgcagaagtt
cagaaaggaaagaatacctcaccttcagggaaaccaaaggcatcaccttcaaagaaacca
acaaaacaagctatgcctaagaaaggacctctcagagagtatttaatgaaaaatccagat
acaatgaaatcttcagaaacacaaaacaaagccaaggataagttgaagaaattggctcat
gaaaccttagtgatgctgctgactaagtatgtaatccgaagtcacttttgtcaaatgtgt
cttgaagagatgccctggaagtctcagatgaatatctatctggcccttgcacactaccat
ctatttaaaaagaacctggaagggcaatataacattggaattagtggttcacagcatctg
gacagttacaatattttggatcctgagatattctcgttaaacaattctggcactgtattg
gcaagggaagctgcagatgataacacaggaaaaccaactccttctctccctgaaaagtca
gaagagactgaaacccaaacctccacaggtaaatctcctaaaaccagaaataaacagagt
cgaactcctcgaagtcgaacagcaaagaccgacaaacaggatcaggttccatcaactgcc
cttttactgaagcattttacaagcatcttcttgcatttgaaaagagcagtggttcttgct
caccgtggtggccactggacattgcttcaaaatgcttgtcgagatctttggagctatact
caagaatttcaagtgattgctaaccagtcacattcccatatgggtgcatttcccatcacc
tgggatcttctttgcaacaccatctggttgccattttattttgcatcagacatgatcatt
gatatgataattgacctacaagcaagcagttctcttaagattgtggatcccgaaggagag
ttttgcattcccagttgtttaggaggtattgcggatgagaatggtggttctaatcttcac
ccccagcctcccatagatgatgtgaatgtggttgacctgagatggatatgcaatctggtt
cttaaaacaatagaattgttatatcatatgaagaagtgggaagcactggtgcacatagct
gtacaatttaacatatttacacatgagaggttcacagaacaagtgagtccactcctggtg
tatgctcagaggcagctgctggagagaatacagcagttcagtggctcagacagtcatgaa
tctcatttcacaaaatatctgtctgatggtgcacaaaagatgagatgcagaaactacata
gggtacaaattacagctgcctgttgctcgttcttccagtgaaggggtttttcctggatgc
tttttcaaacctccaacgaataatgattctacagctttagatcacaatcaagcaaaagcc
ctagtttgtgtgcctcttgatgtgaatgatacactgaaatgttttaaagaaactctagaa
aaatctaaatatcaaagcagagcactgagacacagcaggaaactactttcattatttctt
gcacacacacaagaaaatgctggaagagcaatcagcagtcctatctcttcaagcaggaag
ctgaaatttagcatggtagatgaagtgatatttctaccgacaccgtgtgacctttctcaa
gaaaaatataatttctccagtatggttgagggcagaccaataccaaagtcgcacctttca
gtaattatatcttcctatgaacaaaccatagggatccttgaaatgagtagccagagagac
ctcaaggtacaggctctacatgaacttggaaatcttcacttttatgctggaaataaaaga
gctgcttttaaatactggtgtcaatcccttgatgaaacactcaacattgctgatgctctt
aacacctggcaagagttaagttttctgaaagatgctacagactgctttgcagttggaaga
tcaactgatatgagtgagaaatttctttctcaggctggagcttggggatgtttacatgca
gcagtcctagtggctaagatagctcagtatataacaacatcaaagataagattaagaaca
aaatactgctatttttctgcaatactttttaagaccctgtttagagcttctcttccccat
ccaacatctgactgtgactttgcacaatatgaaacaaatattcttattcctggtattgac
cttttctctgatcgctacagagccgatatctctactgtagttgcaagtctgaatttcatt
atatttgaactacattctgtgaaacaaaatttaataattttacctctgttcacattatac
caatacattgtatctgagatttgtaaggacccagctaaatgtattgaaggaagaatcctc
aagattaaagtacttacagatataggattttttacggaggcctttcatgagctgtctttg
cttatttcgggagagagaattccatggaaaataccagcaggatacagatgtactgaacaa
gtgcaggcctcacagaaatttgatacctcaaaacctctcatgactgatacaaatttgcag
gtactggaagatacatttaattggagtctgtctttaacagtggcgccactgtgcaaccca
caaatgatgaataaattaaccttagccaaaatgcatctcatcatttgtctttctgccaca
ataaataagatacctgaaaaagttgaaaaaaatttgtattttgttgacaacaacaacttg
ccagagccaagcaaaactacagcatcaaatgtaaaagttgatgctgatcaggattcaaga
caacaggaacaaagagacagaatggtgcatcttgttgactgtaaagatgaattaaatatg
gccatgctgaaggggattttattgacagaagctgaagaaactcttagctgtcttgtacag
gacatacaggaaaaatatgatggagatatatctcggtattctgtggaagatttagaagct
cttattgaggccaaacttgagcttgcttctatttcttatcaaaggcatcaagcacctctc
agtgctgctttggctttttctgcaattcgacttctccaagatgccagagttttttgcgtg
gatgtggcacattttcaagaggaaaaggatgaaagggagcatttggactccaccacagaa
ggtgtttcactccctccccatgtaacagcacaaggacacgtgaatgtacatttgtggctg
aggtgtcgagcaatgttagtgactggactcatggcacagatacatggtataggtgaaaag
aaaggaaatgatgtggctgagcgcagaagtgtgataaaagaagtaatattagaggcagaa
gcctttggtgatattgagactcaggctgaaatgatggtgcaagctgctattcttgacctg
caagaaaaacgtccggtggcagacattaaacttcttttgcagaatatcatcggtttactc
caagaggatacatttatttccctgccagcttctttgacttttgtgaaaagcctgcttctg
ctggcagacatactgccactgcaagtagtagaggactcagaacattgctcttctgcagtg
gaaccatttaacttgcttgttttggcacataagcttaccattaaagcaatttttgattgt
ggtgaactcattgaatggcaaggagaagacagtacattgacttgcctggtcctaccctcg
aagaatatctacctgccacatattaacttgctagctctagtcaaaatgaaaattggatgc
acattagctgaaaaagtagcttccacagctgcaagacatcccttgcaatggctacatgct
ctcaggcatttagaatcagcattgaatctttgcagagcagctgcagcaaaaaaaatagag
ttggaagttgaacttctttttcagatgggtaaggtaaaacgccaaacaagagaaacaggc
agtaagtcatctcaagctgttgaaaccctgtttgaagctattaagctcagccagcaacat
gatcaaaaatatgagttagtaagacggtcgtacctcgaaatagcactatcctatttccgt
tttgctgaaagtaatgaggatgaatcagagacagataattcactgccttccaaatttagt
acctattctgaagatcgggcttctgaggaggctatgaaatcagaagtgtacaaagcacaa
gcctggattgcaataagagcagcttcacaggtcagtgaagctatgattgcttctcagctg
ttaattggaatgaagagtgttaaagacctgaacatgaaggatgaagtacaacaaaaaatc
ccagaatttgcttctatggatcttttttcttcgtacagagatttcatatctgatggatac
aatgttatcatctctgaaactcccgaagtatcttctgctgaaaacaaagaaatcacagaa
gactctcagagtgaaagtgaaggaacagaaagtcttgtcaccaaggcaagccagaagaaa
gatacaataacatgggttctcatgattcgctaccacaatcatttgaaaagaatttatagc
acaaacctatctggagctggatcactttctggaagagatggacaccttggtttgatttct
aacacaggaattgttctacgcatagccgaaatgcattccttctttgaaaagtatttgttg
gaatattcattgtgttgtcctgagaattttccagcagaactacatgatgtagacatacca
ctcagtaatacaactgattcttcagagatgtctattgatatgtctgaaactacatcagaa
gtttcacatgtgagagcagcttctccagtttctgtcgttgcagaatatgagaagacagag
agtagggcaacagttgctccagataaggaaattaacattcagtggtacattcctcctatg
gcaaaggaatcaaacgatagagaaactaaggttttgttgctttatgcttataatacaaat
cctatcaggattagtgacatcagttcaacgtccatgttttcaggctacttgtggattcca
ttggctagaattatttctttaagggagaaattgtctgatctgaaggagcaaattgaatta
tcgatgcaagcttctaagatcttttcaacttcaggacgtacaagttttcatgagcaaaat
gaaactttgaaaataattccttcatttaaacccaagagaagtgatgcaaaagtgcatctc
gatggtaaaacagaagaaattgctaaaaggtgtttatctgaagtcaaagcactgctttct
gttgatccagccctgtcctctccattaactgagatcccatttgatgttactttgcaatca
ataacaaatttgaaagatatgtttgatcttgccaatggatgtataataagtgatggaagt
cttttcaattggatgatttctctgcttcactaa
DBGET
integrated database retrieval system
