KEGG   Agelaius tricolor (tricolored blackbird): 139588293
Entry
139588293         CDS       T10815                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    139588293 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:atrc03009]
    139588293 (WDR43)
Ribosome biogenesis [BR:atrc03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    139588293 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Utp12 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_SPT8 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_TEP1_2nd EIF3I Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_RIG_1st UTP15_C DUF6235 Methyltrans_Mon_3rd
Other DBs
NCBI-GeneID: 139588293
NCBI-ProteinID: XP_071279560
LinkDB
Position
Unknown
AA seq 650 aa
MAASPCAFSPRGCRLFASAGPDGRLRVWDTAGSRLQHEYVPSAHLSAACTCLAWAPAGAR
QPPSKDGPQRKKRKSEVGGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVN
CVRWHQESCCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVTCLCISPDGKMLLSAGRTI
KLWDLETKEVYRHFTGHATSVSSLMFTTVKPTNESKPFDGITGLYFLSGAIHDRLLSVWQ
IRSDRKEKNSVMSFTVTDEPTFVDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKP
LTSNCTIQIATPGDGDSTPKPVPILAAAFCTDKQSLLLVYGNALQPIIEKVSLNTSESHI
CLVRDIQKVLSLKTDAAVTKVKTPVVNSDAKVLVPGIPGHSTAVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAEILNKVLNTRKENI
VKNTVARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTVHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVTQVAASQTVQDVPEVNQTAKLVYEDESSEEEGS
DDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPENESEEE
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcggcctctccgtgcgccttctccccccgcgggtgccgcttgttcgcttcggccggg
cccgatgggcggctgcgcgtgtgggacacggccggcagccgcctgcagcacgagtacgtg
ccctccgcccacctcagcgccgcctgtacgtgcctggcctgggccccagccggtgcgcgg
cagccccccagcaaggatggccctcagaggaaaaaacggaagtctgaagttggaggagaa
gtggacaagcagttagatatcctggctattggtacagcagttggtagcattttgttgtac
agcacagtaaaaggagaattacagagcaagctagatggtggtcatgacagtagagtaaac
tgtgtgagatggcatcaagagagctgctgcttgtatagctgttcagatgacaaacacatt
gtggaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagt
gtcacctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaactata
aaactgtgggacttggagaccaaagaagtctacagacatttcacaggccatgctacatca
gtgtcatcattaatgtttaccacagtgaaacctacaaatgaaagtaaaccctttgatgga
attacaggactttatttcttgtctggagctatacacgaccgattattgagtgtgtggcaa
atcagatcagatagaaaagaaaagaattctgtgatgtctttcacagtaacagatgaacca
acttttgtggacctgactgtatcagaagtcaaagaagagcctgtgaagttagcagttgtg
tgcagagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaaaccc
ttaacatcaaactgtaccattcagatagcaacacctggggatggggactccacaccaaag
ccagtccctattctagcagctgcattttgcacggacaaacagtctctgctgctggtgtat
ggaaacgccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggacatccagaaagtgttgtcacttaaaacagatgctgctgtaacaaag
gtaaagacacctgtggtgaactcggacgccaaagttctagtacctggcattccaggacat
agtacagctgtcaaaactccagccttgggaaaggagaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcatcgaggagcgccttggggcattggatattgatgtgagcaaa
gtcaaaactcccggtggccttccccaaacagacagctttgctgtgctgctggtccagggc
ctggaaagcaatgatgcagaaatcttaaataaagtgcttaacacaaggaaagaaaatata
gtaaaaaacacagtagccagaatgcctatacatgctgtcattcccctgctgcatgagctt
acaaagagattgcaaggcaacccatacagtgcctcactaatggttcgatggctgaagtct
gtttttaccgtacatgcatcctacctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactttgcaaaagctttcccgtctgcat
ggaagactcttcattcttgtcacccaggttgcagcatcacaaacagttcaggatgtacct
gaggttaatcagactgcaaagctggtctatgaggatgagtcctcagaggaggaaggctca
gatgatgagatgattgcagataaagactctgacgaaaactgggatgaagatgaagaaaaa
gaggagcaatctgatgaacaagacatgactgttgaaaaggaaatcaatggtgattctgat
ttggagccagaaaacgaaagtgaagaagagtaa

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