Agelaius tricolor (tricolored blackbird): 139588361
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Entry
139588361 CDS
T10815
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139588361 (PDZRN4)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
139588361 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139588361
NCBI-ProteinID:
XP_071279694
LinkDB
All DBs
Position
Unknown
AA seq
1032 aa
AA seq
DB search
MGFDPSRFAGPVAAELQCGLCGRVLEEPLSTPCGHVFCAGCLLPWAARRRRCPLRCRPLA
AAELRPVLPLRSLVQELEVKCDYSPRGCGRTVRLRELPAHLAACRYGPPGPAEPQPPARH
PSGRSPGSAAGQPRAGGGHRCLRALRGGGAPEPGQELKRDALRWSRREKSLLAQLSALQS
EVQLTARRYQAKFGQYMSHISSIARDLAGGQPGKGGARKPLMIMLHRENDTLGFNIIGGR
PNQNNQEESAEGIYVSKILENGPADKAEGLQINDKIIEVNGKDLSKATHEEAVEAFRNAK
EPIVVQVLRRAPAAKAHSGSQDVRLMDASTQTDITFEHIMALAKLRPSTPPVPDICPFLL
SDSCHSLHPVEHEFYEGNEYLSSLPADADRAEDFEYEEVELCRIGSQEKLGLTVCYRTDD
EEDTGIYVSEVDPNSIAARDGRIREGDRILQINGQDVQNREEAVALLSSEECRKIVLLVA
RPEMQLEEGWLDDERNEFLEELNLEMLEEQHNEAMQYTANEVEQPKKHEEEDGTTDTATS
SSNNHEKDSGVGPTDESLRNDESSEQENATEEQNGATLQSKRDLGHSQDTLGSVELQCNE
SFVSGEYIESDFIGNPEEECERFRQLLELKCKIRNHGEYDLYYSSSMIECNRRDQDGVEH
ELQLLNEELRNIELECQNIMQAHRLQKVRDQYGDIWSLHDESFRNYNTSTDVQRGKLDDI
MEHPEKSDKDSSSAYNTAESCRSTPLTVERSPDNSLQRVISITNRKNLRTTIVANQSSSG
QSNRETTSAKTKPTEQNSAAENAVLASESSKFTDQDRQGSEHIPYLSPYHSSSYRYGNIP
AHAKHYQSYMQLIQQKSAVEYAQSQLSLVSMCKDSQKCVEPKMEWKVKIRSDGTRYITKR
PVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRRREFMM
RSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAKSPDGT
RVHNAFLSVTTV
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacccgtcgcggttcgcggggccggtggcggcggagctgcagtgcgggctg
tgcgggcgggtgctggaggagccgctgtccactccgtgcggacacgtcttctgcgccggc
tgcctgctgccctgggcggcgcggcgccgccgctgcccgctgcgctgccggccgctggcg
gccgccgagctgcgccccgtcctgcccctccgcagcctcgtccaggagctggaggtcaag
tgcgactacagcccgcggggctgcggccgcaccgtgcggctgcgggagctgcccgcccac
ctggcggcgtgccgctacggcccgcccggccccgccgagccgcagcccccggcccggcac
ccctcgggccgctcgccgggcagcgcggcggggcagccgcgggcgggcggggggcaccgc
tgcctgcgggcgctgcggggcggcggcgccccggagccgggtcaggagctgaagagggac
gccctgcgctggagcaggagggagaagtcgctgctggcgcagctgtctgcgctgcagagc
gaggtgcagctgacggcgcggcggtaccaggcgaagttcggccagtacatgagccacatc
agcagcatcgcccgggacctggcgggcggccagcccggcaagggaggagcgcgcaaacca
ttgatgatcatgctacaccgagaaaacgacactttgggcttcaatattataggaggacga
cccaatcagaacaatcaggaggaatctgctgagggaatttatgtgtcaaagattttggaa
aatggacctgcagacaaagcagaaggcctgcaaattaatgacaagattattgaggtcaat
gggaaggacctctctaaggccactcacgaggaagccgtggaagctttccgcaatgccaag
gagcccattgtagttcaggttttacgacgagccccagctgccaaagctcacagcggctct
caggatgttcggcttatggatgccagcactcagactgacatcacttttgagcatatcatg
gctctggccaagctaaggccttccacaccaccagttccagatatctgcccttttctactt
tcagatagctgccattctcttcacccagtggagcatgaattttatgaaggcaatgagtat
ctttccagcctgcctgctgatgcagatagagcagaggactttgagtatgaggaagtggag
ctgtgccgcattggcagccaggagaagctggggctgactgtctgttacagaaccgatgat
gaggaggacaccggaatctatgtcagtgaggttgatcccaacagcattgctgccagagat
ggacggatccgtgaaggagaccgcattttgcaaataaatggccaagatgtccagaatagg
gaagaggcagtggcgttgctctccagcgaagaatgcaggaaaattgtgttgctggtggcg
aggccagagatgcagctggaggaagggtggctggatgatgaaaggaatgaattcttagaa
gagttaaacttggaaatgttggaagagcagcataatgaagcgatgcagtacacagccaat
gaggtggagcagccaaagaaacatgaagaggaagatggcactacagacactgcaacctca
tcatccaacaatcatgagaaggacagtggggtgggacctacagatgaaagtcttcgcaat
gatgagagctcagagcaagaaaatgcaactgaagagcagaacggtgctaccctgcagagc
aaacgggatctgggccacagccaggacacattaggcagtgttgagctccagtgcaatgaa
agctttgtgtctggggaatacattgaatctgatttcataggaaacccagaagaggaatgt
gaaaggtttcggcagctgttggaactgaagtgcaagattcgaaaccatggggagtatgat
ctttattactcaagcagcatgatagaatgcaacagaagagaccaagatggagtggagcat
gagctgcagctactcaatgaggaactgaggaacattgaacttgaatgccagaatattatg
caagctcaccggctccaaaaggtgagagaccagtatggagacatttggtctttacatgat
gaaagtttcaggaattataacaccagcacagatgtacaaagaggcaaactggatgatatc
atggagcaccctgagaagtctgacaaggacagctccagtgcctacaacactgctgaaagc
tgtaggagcactccactgactgtggagcgatcccctgataactctctccagagggtaatc
agcataaccaacaggaaaaacctgaggaccacaattgttgctaatcagtcatcctcagga
caaagcaacagggagacaacctcagccaaaaccaaacccaccgagcaaaacagtgctgct
gagaatgcagtgctggcatcagaaagcagcaaattcacagaccaggataggcaaggcagc
gagcacattccctatttgtctccatatcacagttcttcttacaggtacgggaacatccct
gctcatgcaaagcattatcaaagctatatgcagctgatccagcagaagtctgctgtggaa
tatgcccagagccagctcagcctggtgagcatgtgcaaagactcgcagaagtgcgtggag
cccaagatggaatggaaagtgaaaataaggagtgatgggacgaggtacatcacaaagaga
ccagttcgagacagaatcctgaaggaacgtgccttaaaaattaaagaggagcgcagtggg
atgacgacagatgatgacacgatgagtgagatgaagatgggtcgctactggagcaaagag
gagcggaagcagcatttggtgcgcgccaaggagcagaggaggcggcgggagttcatgatg
aggagcaggctggagtgtctaaaggaaagtccacagagtggcagcgagggcaaaaaagaa
atcaacattattgaactgagtcacaaaaaaatgatgaaaaagagaaacaagaaaatcctg
gacaactggatgacaatacaagaactgatgacacatggtgctaagtccccagatggcaca
agagtgcacaatgcctttttatcagttactactgtatga
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integrated database retrieval system
