Agelaius tricolor (tricolored blackbird): 139588418
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Entry
139588418 CDS
T10815
Symbol
DHX57
Name
(RefSeq) putative ATP-dependent RNA helicase DHX57 isoform X1
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
atrc03012
]
139588418 (DHX57)
Enzymes [BR:
atrc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
139588418 (DHX57)
Translation factors [BR:
atrc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
139588418 (DHX57)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
RWD
DEAD
HA2_C
zf-CCCH_4
HA2_N
zf_CCCH_4
Torus
AAA_22
zf-CCCH
zf-CCCH_2
nSTAND3
AAA_19
NPHP3_N
NB-ARC
AAA_14
Viral_helicase1
UBA
Motif
Other DBs
NCBI-GeneID:
139588418
NCBI-ProteinID:
XP_071279867
LinkDB
All DBs
Position
Unknown
AA seq
1364 aa
AA seq
DB search
MSWLARKKGKPNRGGGRGKGGGGKRGGGSGHSNKPQLGGSRKCSTKIWDDGDDFCLFEEP
RLESRSSAPARRGGQMKQRPEARMPLQTIHMTSENQRRVKELLQELQGQELAPESDVAGE
DDDEPDYLDDEQCWSTEQEASDAMPRLSAEPAEHRIVDSEVSSFAVHKLSRYGFDCERCR
AVLRSCNGNIGASLEDLLLQCFSEKYGEKMQVSAAAAEASQEECLEQRQEEAFALRSIYG
EKFVERIKNRVWTFSLELDYLAHRFSKSKQKSTKDTAKQTSKEICKFYLQGGCRFGSKCR
FRHEFPPNHPLNTSKNSVDDAHLRDSDGPIYELEVRFPDENKYPLQAPLVAFYSTDENLP
LACRLHIAEFLFGKALAAAESHEPVVYTLVTCLEDEHEISELLSNTHHKFSVPPVSLLAA
PPVKPQTESAPASNQQAEAVHSLSQASIVSEPQEEEVVAEEEEEEPEQVVVENESYVNLK
KKLSKKYDVQAKSLYNENVKICAQFRQKKSSRHFQSMLYERQKLPAWQERENILGLLESH
QVLVVSGMTGCGKTTQIPQFILDASLQGSPSRVANIICTQPRRISAISVAERVAKERTER
IGLTVGYQIRLESVKSSATRLLYCTTGVLLRRLEGDLTLQGVTHVIVDEVHERTEESDFL
LLVLKDIMVQRPDLRIILMSATLNAELFSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTR
YVLEDSSPYRRKVKQEQSGRHKRTAFEEVEEDLRRAGLLETTETVVRDSDPDQKLTLKQL
LTRYKGVSKAVLKTMSVMDLDKVNLELIEALLEWIVAGRHSYPPGAVLIFLPGLAEIKML
YEQLQTNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGVTKIIISTNIAETSVTID
DVVYVIDSGKMKEKRYDPSKGMESLEDTFVSKANALQRKGRAGRVASGVCFHLFSSHHYN
HQLVKQQLPEIQRVPLEQLCLRIKILEMFSEQSLHSVLSRLIEPPRTESLQASKVRLRDL
GALTPEEKLTPLGYHLASLPVDVRIGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDK
REEANKKKLEFAVGNSDYLALLQAYKGWRLSIKEGSQASYNYCRENFLSGRVLQEIASLK
RQFAELLSDIGFVKEGLRARDIEKKWSQGGDGVLDATGEEANSNAENIKLISAMLCAALY
PNVVQVKKPEGKYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLV
YHEKIKTSRVFIRDCSMVSVYPLVLLGGGQVHMQLLKGDFVISLDDGWIRFVAASHQVAE
LVKELRCELDQLLQDKIKNPSMDLCMCPRGSRIIGMIVKLVTTQ
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttagcgaggaaaaaaggaaagcccaacagaggaggaggacgaggcaaagga
ggcggtggaaaacgaggaggcggcagtggccattcaaacaagcctcagctcggtggaagt
aggaaatgttcaaccaaaatttgggacgatggagatgatttttgtctctttgaggaacca
aggctagaatccagatcaagtgcccctgccagaagaggagggcaaatgaagcagagacct
gaagcaagaatgcctctgcagaccatacacatgacatcagagaaccagagaagagtgaaa
gaactccttcaagagctgcaaggacaggagctggcacctgaatcagatgtagctggagaa
gatgatgatgagcctgattacctggatgatgaacagtgctggtcaacagaacaggaagct
tctgatgcaatgccaaggttgtctgctgagccagctgagcacagaattgtggacagtgaa
gtgtcttcatttgctgtgcacaaactctccaggtacggttttgactgcgagcgctgtagg
gcagtgctgagatcctgcaatggtaatattggggcctcattggaggatttgctattgcag
tgcttctctgaaaagtatggagagaagatgcaggtttctgcagcagctgctgaagccagt
caagaggaatgtttagagcagagacaagaagaagcttttgccctccggtcaatttatgga
gaaaagtttgtagaaaggattaaaaatcgtgtttggactttcagtttggaattggactac
ctagcacacaggttcagtaaatctaaacaaaaaagtacaaaggacacagcaaaacagact
tcaaaggaaatatgtaaattttacctccaaggaggctgcaggtttggttcaaaatgcaga
tttaggcatgaattccccccaaaccatccattaaacacatccaagaactctgtagacgat
gctcatctcagagacagtgatggtcccatctatgaacttgaagtgagatttcctgatgag
aacaagtatcctcttcaagcacctcttgtggcattttactccactgacgagaatctgcct
cttgcttgtcgtctgcacattgctgaattcctctttggaaaggccttggcagctgcagag
tctcatgagccggtggtgtacaccttggtgacttgtttagaagatgaacacgagatcagt
gagctcctgagcaatactcatcacaagttcagtgttcctcctgtctccctgctggcagca
cctcctgtaaagccacagacagagagtgcacctgcttcaaatcaacaggctgaagctgta
cactctctgtctcaagcctcaatagtgtcagagcctcaagaagaagaggtggtggcagaa
gaggaggaggaagagcctgaacaagttgttgtggagaatgagagttatgtgaacttgaag
aagaagctttccaaaaagtatgatgtgcaggcaaagtctctgtataacgaaaatgttaaa
atctgcgcgcagtttcggcagaaaaagtcttccaggcactttcagtccatgctgtatgaa
agacagaagctccctgcatggcaagagagagaaaacattctgggtttgcttgagagccac
caagttcttgttgtgagtggcatgacaggatgtgggaaaaccactcagattcctcagttt
atcttggatgcttcattgcaaggctctccaagcagagttgcaaacatcatctgcactcaa
cctcgcaggatctctgccatttctgtggctgaacgtgtagccaaggaaagaacagaaagg
attggactcactgttggctatcagatccgtctggaaagtgtcaagtcctcagctaccagg
cttttgtactgcactactggtgtgctgttgagaaggctggaaggagatctgactttgcag
ggagtcactcatgttattgttgatgaagttcacgaaagaacagaagaaagtgacttcctg
ctgctggttttgaaggatataatggttcagaggccagacctgcgcattatactgatgagt
gccaccctgaatgctgagcttttctctcagtacttccactcctgtccaatcattaacata
ccaggtcgaacgtttcctgtggaccagttttttctggaagatgtgattgcaatgacaagg
tatgttttagaggacagcagtccctacaggaggaaggtaaagcaagaacagagtgggaga
cacaaaagaactgcatttgaagaagtagaggaagacctgaggcgtgctggccttctggaa
accactgagaccgtggtcagagattcagatccagaccagaagttaactctgaagcagctc
cttacacgatataaaggggttagcaaggcagtgttgaaaacaatgtctgtcatggacttg
gacaaagttaatctagaattaattgaagccttgctggaatggatagttgctggcagacat
tcataccccccaggtgctgtgttgatatttttgcctggcctagcagaaatcaagatgctt
tatgagcagcttcagactaatgctctttttaataacaggcacagcaagaggtgtgtcgtt
tatccacttcactcctcactgtccagtgaagaacagcagtctgtgttcctcaggcctcct
gcaggagttaccaaaatcatcatctctaccaacattgcagagacatctgtcaccatcgat
gatgtggtctatgtgattgactctggaaaaatgaaagagaaaagatatgacccaagcaaa
ggaatggaaagtctggaggacacctttgtgtccaaggccaatgctctgcagaggaaaggg
cgggcaggacgtgtggcctcaggcgtctgcttccacctcttcagcagccaccactacaac
catcagcttgtaaaacagcagctgccagaaatacagagagtgcccttggagcagctctgt
ctaagaattaagatcctggagatgttttctgagcagagtcttcactctgtcttatcacga
ctgatcgagccccccaggactgagtccttgcaggcatcaaaggtgcggctgcgggacctg
ggagcgttaactccggaggagaagctcactcctctgggataccacctggcttcactgcct
gtggatgtcaggattggcaagctcatgctgtttggcaccatcttccgctgcctggatcct
gcactgaccatagcagccagcctggcctttaagtcaccttttgtgtcaccatgggataaa
agggaagaagcaaacaaaaagaagctggagtttgcagtaggaaacagtgactacctggct
cttctccaggcctataaggggtggcgtttaagtatcaaagagggctctcaggcaagctac
aactactgcagggagaactttctgtcaggaagagttcttcaggaaattgccagtctgaag
aggcagtttgcagagctgctttctgacattggctttgtgaaggagggattgagagccagg
gatattgagaagaagtggtcccaaggaggcgatggcgtgttggatgccacaggagaggag
gcaaattcgaatgcagagaacatcaagctgatctcagctatgctgtgtgctgcactgtat
cccaatgttgtccaggtgaaaaagcccgagggtaaataccagaagaccagtacaggagcg
gtcaaaatgcaaccaaaagcagaagagctgaagtttgttactaaaaatgatggttatgtt
catattcatccttcgtctgtgaattatcagaccaggcactttgagagcccgtacctggtg
taccacgagaagatcaagacgagccgtgtgttcatccgggactgcagcatggtgtccgtg
tacccgctggtgctgctgggcggcggccaggtgcacatgcagctgctcaagggggacttt
gtcatctccctggatgatggctggatccgctttgtggctgcctctcaccaggtggctgag
ctggtgaaggagctgcgctgcgagctggaccagctgctgcaggataaaatcaagaatccc
agcatggatttgtgcatgtgcccccgaggctctcggatcatcgggatgattgtcaagctt
gtgaccacacagtga
DBGET
integrated database retrieval system
