Agelaius tricolor (tricolored blackbird): 139588475
Help
Entry
139588475 CDS
T10815
Symbol
LAMB4
Name
(RefSeq) laminin subunit beta-4
KO
K06245
laminin, beta 4
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04510
Focal adhesion
atrc04512
ECM-receptor interaction
atrc04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139588475 (LAMB4)
04518 Integrin signaling
139588475 (LAMB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
139588475 (LAMB4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB4
LAMB1
Rod_CreS
Motif
Other DBs
NCBI-GeneID:
139588475
NCBI-ProteinID:
XP_071279993
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MRLGLAILIHLMLIRPQHAQHDCGAGSCHPALGDLLQGRSKQLTASSTCGTSSPQKYCIL
GYLEAEEKCFLCDSRYPYNPYTQHNSHMVENVITTFEPERKKKWWQSENGIDHVSIRLDL
ETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKVFRYFAHDCAASFPNISSGPAKSVGD
VVCDSRYSDIEPSTEGEVVLKALDPSFEIENPYVPYIQDLITLTNLRINFTKLHTLGDAL
LGRRHSDPLEKYYYAIYEMVVRGSCFCNGHASQCDSMQNLRGDVFHQSGMVHGRCICHHN
TEGFSCERCKDFYNDAPWRPAEGTQDNACKRCNCNSHSSRCHFDMAVYQASGGVSGGVCE
DCQDNTTGQHCDTCKPSFYQDPLKAISDPQPCLPCSCDPAGTLPEGVCERRTDPALGTVA
GRCPCKDNVEGARCDRCKANYHGLSSSDPLGCQPCNCDPSGTLPFSVCDPATGQCLCQRF
TTGQRCERCLAGYWGLGNSLYGCSPCDCDIGGSQNNLCSPKDGQCECLPNIMSRQCNEPA
PGFFFLPLDYYIYEAEHARPLSGSAPLVQPSTLPRCDIYFQKKGYEFMIENGKIVLNRNK
KRTVRKSGLEQGAMQFGQGSDVALVFRPPSAGRAVTWTGHGFARVPSGAGLRFAISNVPF
AMDFDITVRYEPEFLEDWLASVAIQPAGILSGQHCKNKVLSQEPHELHLPASKRIAILQT
PVCLEPGTEYFVDVYFSQLSASDKKAKSFILIDSLGLIPRIGSVENLCSAKDLDEYQKYH
CIEIASEVGPHVLPEACARLIASLSARIHNGAVACKCNPQGSLNASCSKLGGQCQCKANV
VGRCCDTCSAGSYGFGFHGCYACECHPQGSLSALCDQVTGQCSCRREVGGQRCSRCLPGY
FGFPHCRPCPCHGHAELCDPRTGECLDCRGFTAGSHCERCMDGYYGNPLDGEPCHPCMCP
GAPTSNRYFAHSCYQDSQSAQLVCNCLEGYSGNQCDKCPSGFYKNSSSPGLDCAPCPCNN
NIDLTDPESCNRVTGECTKCLHNTHGANCQFCKPGYFGSALNQSCQSCTCNLAGVQPAMC
PGGDAACLCDPATGACPCLPNVLGATCDQCASGYWDLASGKGCQTCDCDPKNSQSNQCNQ
LTGQCPCKPGYSGRCCNECEENYFGNPQLHCVSCECNLEGTRQPTCDKATGACNCRAGVT
GRLCDQCARGFEKDFPSCPQCHLCFDQWDAEIAALAQTVQGLMRFAAKLEDKGGRMPSCD
MRFKAFEDAISEMERILRHPVLSLQALSGIRDFQGFLQQKVAQMDPLHSSPFEFPDLNKS
IEDIVEEANLVFELLQQKIHLHQSFQYLNFKEAISNIRKHSEVSLLAEQRTRGTSPVVRH
SEYTRNDTLAMLDHQLFDASSVLQQLRMIKSPDIQNLNEKICGVPGDQPCATAACGGALC
QDSHGLRHCGGPDCSGALSLSSEAFRKAEETAVMLNNLTTQLQEPANQVKSIRKMAEDSK
LKGSQFNGQLETAINQIEVDGEITKEFIQKVKVFLLDESAPPEDIEKVANYVLQINLPLT
PQELAGMLGKLQSFMNHCEKYKLNNKRNIKGEDAQTLLVEAQEADKAAKALLPVDEINNK
LKNVVKSQGHSKSIIIKSNEEIQSIRTQISQAQNQVNKTNNKLNDLSAKQTGMEDESATW
QAKMLMNKNQAAKARAEAEAAHKQAKKMENEFTDVKRKYTILQEKLKMRGPPKVTLEKVK
QLKEEAEKLAEETEKKIKRITDLEKKLQELNQTKQDKAEQLRQLEEQVLAIKNEIMEQES
KYATCKS
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgaggctggggctggccatcctgatacacctcatgctgataaggccccagcatgcacag
catgactgtggggctggctcctgccacccagcccttggggacctcctccagggccgcagc
aagcaactgacagcctcgtcaacctgtggcacgagcagccctcagaagtactgcattcta
ggctacctggaggctgaagagaaatgctttctctgtgattccagatacccatataatccc
tatacccagcacaacagtcacatggtagaaaatgttatcacaacgtttgagcctgaaagg
aaaaagaagtggtggcagtcagaaaatggcattgaccatgtcagcattagattggaccta
gaaactttattccaattcagccatcttatcctgacctttaagacttttcggcctgcagca
atgctggttgagcgttctaccgattttggtcagacctggaaagtgtttagatattttgca
catgattgtgcagcttctttccccaacatctcttctggtccagcaaaaagtgttggagat
gttgtttgtgattcaagatattcagacattgagccctccactgaaggcgaggttgtttta
aaagccttggatcccagctttgaaatagaaaatccatatgtgccatatatccaagatctc
attacattgacaaacctaaggatcaattttactaaactccacacccttggagatgctctg
cttgggaggaggcacagtgatccccttgagaagtactactatgccatctatgagatggtt
gtgaggggcagctgcttttgcaatggccatgccagccagtgtgattccatgcagaacctc
cggggagatgttttccatcagtccgggatggtccatgggagatgtatctgccaccataac
actgaaggtttctcttgtgaaagatgtaaagatttctacaatgatgctccctggaggcca
gctgaagggacacaagataatgcttgcaaacgttgtaactgcaacagccactccagcagg
tgccactttgacatggccgtgtaccaggccagcggcggggtcagcggtggcgtttgtgag
gactgccaggacaacaccaccggccagcactgcgacacctgcaaaccttccttctaccag
gatccgctcaaagccatctcagatcctcagccctgcctcccatgcagctgtgaccccgcg
gggaccttgcccgagggcgtgtgcgagcgccgcacggaccccgcgctgggcacggtggcg
gggcgctgcccctgcaaggacaacgtggagggcgctcgctgcgacaggtgcaaggcaaac
taccacgggctgagcagcagcgaccccctgggctgccagccctgcaactgcgatccctcg
ggcactttgcccttctccgtctgtgatcctgccacgggacagtgcctctgccagaggttc
accacagggcagcgctgtgaaagatgccttgcaggatactggggtcttggcaacagcttg
tatggctgttctccatgtgactgtgatattggtggatcccagaataacttgtgctcgccg
aaggacggccagtgcgagtgtctgcccaacatcatgagccgccagtgcaacgagccagct
ccaggattcttctttctgcccctggactattatatttatgaagctgagcatgcaaggccc
ctttctggctctgcacccttggttcagccaagcactcttccaaggtgtgacatttacttc
cagaagaaaggctatgagttcatgattgaaaatggaaagattgtgttaaacaggaacaag
aaacgaactgtaaggaaatctggactggaacagggtgcgatgcagtttggacagggctcg
gatgtggcgctggtgttccggccgcccagcgctggccgggctgtcacctggacaggacac
ggcttcgcccgcgttcccagcggagctgggctcagatttgccatcagcaatgttcccttt
gctatggactttgatatcacagttcgctacgagcctgagttcttggaagactggcttgca
agtgttgccatccagcctgctggtatcttgtcgggtcaacactgcaaaaacaaggtcctt
tcacaggagccacatgagttgcatctcccagcttcaaagaggattgcaattctgcaaact
ccagtctgcctggagccgggaacagaatattttgtggatgtgtatttttcccagctctct
gcctctgacaaaaaggcaaaatcattcatcttgattgactcacttggacttattcccaga
attggatctgtggagaacttatgcagtgcaaaggatttagatgagtaccagaagtatcac
tgcattgaaattgcatctgaagttgggcctcacgtcctgcccgaggcgtgcgcgcggctc
atagcgagcctgtcagcccgaatccacaacggcgccgtggcatgcaagtgcaatccccaa
gggtcgctgaatgccagctgtagtaagctggggggccagtgtcagtgcaaggccaacgtc
gtggggcgctgctgtgacacctgctctgcaggcagctacggcttcggcttccacggctgc
tacgcgtgcgagtgccacccgcaaggctcgctgagcgcgctgtgtgaccaggtgacaggg
cagtgctcctgccgccgggaggtgggtggccagcgctgcagccgctgcctgcccggctac
ttcggctttccccactgccgtccctgcccctgtcatggccacgcggagctgtgcgaccct
cggaccggagagtgcctcgactgccgcggcttcaccgctggaagccactgcgagaggtgc
atggatggctattatggaaaccctctggatggagaaccctgccacccatgcatgtgccca
ggagcacctacaagcaataggtattttgcacattcctgttaccaggactcccagtctgca
cagcttgtctgtaattgtctcgagggatattcaggcaatcagtgtgacaagtgtcctagt
gggttctacaaaaactccagcagccctgggcttgactgtgcaccatgtccctgcaataac
aacattgatttgacagacccagagtcctgtaacagggtcactggggaatgcaccaagtgt
ttacacaacacccatggagcaaactgccagttctgcaaaccaggttattttggctcagcc
ctcaatcaaagctgtcaaagctgcacgtgcaatctggcaggtgttcagcctgccatgtgc
ccagggggggatgcagcctgcctgtgtgacccagccacaggagcttgtccctgcctgccc
aatgtgctgggtgccacgtgtgaccagtgtgcctctggctactgggacctggctagtgga
aaaggatgtcagacctgtgactgtgatccaaaaaactcccaaagcaaccagtgcaaccag
cttacaggccagtgtccatgtaagccaggttacagtggaagatgctgtaatgaatgtgag
gaaaactactttggcaatccccagctgcattgcgtttcatgtgagtgtaacctggagggc
acccgccagcccacgtgtgacaaagccaccggcgcgtgtaactgccgggctggcgtcacc
ggccggctctgcgaccagtgcgcccgcggctttgagaaggactttccctcctgccctcag
tgccatctttgttttgatcagtgggatgctgaaattgcggctcttgctcagactgtgcag
gggttaatgaggtttgcagcaaagctggaagataaaggaggacgaatgcccagctgtgac
atgcgcttcaaagccttcgaagatgccatttctgaaatggaacgcattttgagacatcct
gtcctttcactgcaggccctttcaggcatcagggattttcagggcttccttcaacaaaaa
gttgcacagatggatccccttcacagttcaccctttgagtttcctgaccttaacaagagc
atagaagatatagtagaagaagccaacctagtgtttgaacttctacaacaaaaaatacat
ctgcatcaaagttttcagtacttgaatttcaaagaggccatcagcaacattaggaaacac
tctgaagtatcattgctggcagaacagaggaccagggggacaagccctgttgtaagacac
tcagagtacaccaggaacgacacccttgctatgttggaccatcagctctttgatgcaagc
agtgtgctgcaacagctcagaatgatcaaaagccctgacatccaaaacctgaatgaaaag
atctgtggtgttccaggagaccagccatgtgccacagcagcctgtgggggagctttgtgc
caggacagtcatggactaaggcattgtggtggcccagactgcagtggagctctttctctc
tcctctgaggccttcagaaaagctgaggagactgctgtgatgctaaataacttgactact
cagctacaggaacctgcgaatcaggttaaaagcattagaaaaatggcagaagacagcaaa
ctgaaaggctcacaatttaatgggcagctggagacagctatcaatcaaattgaagttgat
ggagagatcactaaggagttcatccaaaaagtgaaagtcttcttgctagatgagagtgca
cctccagaagacattgagaaagtggcaaattatgttctgcaaataaaccttcccttgact
ccacaagagctcgcaggcatgcttggcaaactccagagctttatgaaccactgtgagaag
tacaaactgaataacaagagaaacataaaaggggaggatgctcagacactgctggtggag
gcacaagaagctgacaaagcagctaaagctcttctgccagtggatgaaattaataataaa
ctaaaaaatgttgtgaagtcccaaggacactccaaaagcatcatcataaagtcaaatgaa
gagatacaaagcatcagaacacaaatctctcaggctcagaaccaagtgaacaagacaaac
aataaactaaatgacttgtcagccaaacagactgggatggaagatgaaagtgccacatgg
caggcaaaaatgctgatgaacaagaatcaagctgcaaaggcaagagcagaggcagaagca
gcccacaagcaagccaagaaaatggaaaatgaatttactgatgttaaaagaaagtacacc
attcttcaagaaaagctaaaaatgcgaggacctccaaaagtgacactagaaaaagtgaag
cagttgaaagaagaagcagaaaaactggctgaagagactgaaaagaagataaagagaata
acagatttggagaagaagcttcaggaactgaatcaaaccaagcaagataaagcagagcaa
ctgagacaactagaggaacaagtgttagccattaaaaacgaaatcatggagcaggaaagc
aagtatgcaacatgcaagagttag
DBGET
integrated database retrieval system
