Agelaius tricolor (tricolored blackbird): 139588553
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Entry
139588553 CDS
T10815
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04137
Mitophagy - animal
atrc04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139588553 (OPTN)
04137 Mitophagy - animal
139588553 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139588553 (OPTN)
Membrane trafficking [BR:
atrc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139588553 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
139588553 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
139588553 (OPTN)
Xenophagy
Cargo receptors
139588553 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
DUF6439
EDR4-like_1st
Motif
Other DBs
NCBI-GeneID:
139588553
NCBI-ProteinID:
XP_071280191
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MGDLAPAPLSRGPSGQEPGKRAGSEHGVPGRRREERGWEVPAEAEAGTAGEGGQSVRQLS
GHGRAVREIESLLLANLVTAASEMSSKSKGRPAENGEHSKSKMENGVGSMAAPALNTYTP
EEMVQQMKELITENNELKEAMKLHNQAMKDRYEELSTWREKQKEEREFYELKFKEAKQCL
QAKCIENEQLQQQLQSLKEREEGAEMEAPEKEVRQLKAQVQRLQAEKADLLAIISELQVK
LNISAEDSFVEIGMNEGEINRTAKEHQENGGEISSDVAVYIRSKSADESKNLESEEITVS
QLLCSLRNETQKREELEKELQDHRERLSKLEKETRNCLESGTQTEQEEESSEAVGSEVEA
LNLQVCALFKELQEAHEKLKEAELIQKKLQEKCQVLERKSLAAASELEEKQQLIYTIKKL
ELQVESMQAEVKLEQAKTHEEKARYNNLQDSYSKLLPELTEAKKKIDEMKLKELDRVDKA
VVEQLTAKVELAEQALAAKQLQIDEMKQMIAKQEEDLETMSVLRAQMEVYCSDFHAERAA
REKIHEEKEQLAVQLAYLLKEQQNFEDLGRTSLAEMQSRHGARMPDQEHSPHLVQRGTNS
QDWPEQRNISIYSCPKCEEILPDLDTLQIHVMDCIN
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgggggacttggctcccgccccgctgagccgggggccctcagggcaggagccgggaaag
cgagcaggaagcgagcacggcgtgcccgggaggcggcgggaggagcggggctgggaggtc
cccgcggaggcggaggcggggacggcgggggagggcgggcagtccgtccgtcagctgagc
ggccatgggcgcgccgtgagggaaattgaaagtttgctcttggcaaaccttgtaacagct
gcttcagagatgtccagcaagtcgaagggccgtcctgctgaaaatggagagcattctaag
agtaaaatggaaaatggagtgggcagcatggcagccccagcccttaacacctacaccccg
gaagagatggtgcaacagatgaaagaactaatcactgagaacaatgagctaaaagaagcc
atgaagttgcacaaccaagctatgaaggaccgatatgaggagctttccacctggagagag
aagcagaaagaagagcgagaattttatgagttaaagtttaaggaggcaaagcagtgcttg
caggccaagtgcattgaaaatgaacagctacagcagcaacttcagagcttaaaggaaaga
gaagaaggagctgaaatggaggctcctgagaaggaagtgaggcagctgaaggcccaggtg
cagcggctccaggctgagaaggcagatctgctcgccatcatttcagagctgcaggtcaag
ctgaacatctcagcagaggattcctttgtggagattgggatgaatgaaggggaaataaat
agaactgcaaaggaacatcaagagaatggtggtgaaatctccagtgatgtcgctgtctac
atcaggagcaaatctgcagatgaatcgaagaatttggagtctgaggagataactgtgagc
cagctgctctgcagccttagaaatgaaactcagaagagggaagaacttgagaaggagctg
caggatcacagagagagactgtcaaagctggagaaggagaccagaaactgcctggagagt
gggacacaaactgaacaggaagaagaaagttcagaagctgttggcagtgaagtagaagct
ctgaatctgcaagtttgtgctctgtttaaagagcttcaggaagcccatgagaagttaaaa
gaagcagaattgattcagaagaaacttcaagaaaagtgccaggtactggaaagaaaaagc
ttggctgctgcatcagaattggaggagaagcagcagctaatatacaccatcaagaagctg
gaacttcaggtggagagcatgcaggcagaggtcaagctggaacaagccaagacacatgaa
gaaaaggcaagatacaataaccttcaggattcatatagcaagctccttccagaactcact
gaggcaaagaaaaaaattgatgaaatgaaactcaaagagctggacagagtagataaagct
gtggtggaacagctgacagcaaaggtggagttggcagaacaagcccttgctgcaaagcag
ctccagatagatgaaatgaagcagatgattgctaagcaagaggaggaccttgaaactatg
tctgtgctccgtgctcagatggaggtttattgttctgatttccatgctgagagggcagca
cgagagaagatccatgaggagaaggagcaattggctgtccagctggcatacctactaaaa
gagcagcaaaactttgaagaccttggccgaacctctctggcagagatgcagagtcgccac
ggagccaggatgccggatcaggagcactcacctcaccttgtccaaagaggaacgaatagt
caagactggccagagcagcggaatatttctatttattcatgtcctaaatgcgaagaaatt
ctacctgatttggacacactgcagattcatgttatggactgcattaattga
DBGET
integrated database retrieval system
