Agelaius tricolor (tricolored blackbird): 139588773
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Entry
139588773 CDS
T10815
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
139588773 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139588773 (DMXL1)
Membrane trafficking [BR:
atrc04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
139588773 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
139588773 (DMXL1)
RAVE complex
139588773 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_WDR19_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
139588773
NCBI-ProteinID:
XP_071280494
LinkDB
All DBs
Position
Unknown
AA seq
3097 aa
AA seq
DB search
MNLHQVLTGAVNPGDSCFSVGSLHDQPFTAYASGCDIVVLGTDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGKVICIFEPVSILKQNSSHHNGLHYQWQKNAQISLEAIVHNLTW
DPTGTRLLTGSNRLQLWSNVPLENPADNDSTERAGVGLGEWRCIWQCKTASQVCLMKFSP
DGEFFATAGKDDCLVKVWYNAENWRSAVSPPGASPENQAKELDFSFVYLAHPRSVNAFSW
RKTSKFMPRGAVCNVLLTCCKDNVCRLWAETLLPNDSLLYGGGYSNWSEAVNFTNNFKRN
TSSKEKVQSALELNLRHFRRGRRRSGAVVAHTGYALHQQDPHEAHRNIPPHANALCHYHI
AASINPATDIPLLPSITSLSLGENEEKSGPFIVHWLNNKELHFTLSMEVFLQQLKRSFEH
HSPETNTEDSNQMDGRSEEEADENSDEQKGNQEKKELGDEKAAPYSSLVPLSSAIFDHEI
EVLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDA
NSLCRSIVMYACTKNVDLAIQQGKQKPPGLTRSSSMLISSGHSKSTNSLKLSIFTPNVMM
ISKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHN
ALISPDVEKAIQTNESSKSQESPVRPQSRGNANVTSQDPNAVYSELILWRVDPVGPLSFS
GGVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQHLRLYQAVIDA
KKLLCELSNPEISKYVGEVFNIISQQSTARPGCIIELDAITELHGRKTQLFHVFQEDFIL
NNQEKEMPSKKISLSDSGNQQNGFSEKFYLIVIEYTQNCSLLHMWHLHLKAIPVSIDEKI
GSNPSEETTQTEELYSSPDPEKIQSPFTQKYRACRANLQSTSWLTLSSKMVYSQELSMPE
GVEIISVKPSAGHLSSSSIYPVCRAPYLLATSCSDGKVRFWRCRVVTEASSMPQYGTDSD
VKYVWEEWPLLIEEGLPSSSAINVPGRPTDVSCAHTNRLAVAYKQAASRNSHLSQDFVMH
VSIFECESTGGSSWILEQTLKLDELGTMLDSGVSVDSDLVADNQQDTSLSHGGGIIPNTK
HLVHLDWMSREDGSHILTVGIGSKLYMFGQVSGKRQEQNGNEIATVSHSGSPKAATLSGF
VLLRCVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQSPSKQELVSTDSYSG
SMPCLTSLMKQSQSVASGLHPPKRTLTRSMTSLAQKLSGKRSASDLSMEIEDSGLFEAAH
TLSPTLPQYHPYQLLELMDLGKVRRAKAILSHLVKCIAGEVVAVNESEPNHDRRLRSLTI
SASGSTARDPKMFSKTETTDYIEIDSVPPLPLYALLAADDDSSYSCSEKSNNQHSQNKKD
MPNDSYENLFQNTVISTDDLVTFEADEDSSKVIDLSQYSPTYFGPEHAQVLSRHLLHSSL
PGLTRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRRHTFLTTALP
PVHRAQLLHQGLSTSHFAWAFHSVAEEELLSMLPAVQKGDPTWSELRAMGVGWWVRNIHS
LRKCIEKVAKAAFQRNNDPLDAAIFYLAMKKKAVIWGLYRSQKDTKMTQFFGNNFTEDRW
RKAALKNAFSLLGKQRFEHSAAFFLLAGHLKDAVEVCLEKLHDIQLALVISRLYESEFEV
SSTYKSVLQKRVLGSVSTGKESSGNIHCDPFLRSMAYWILEDYSKALDTLIKHSVEDEGD
EGDGSSSCNPAVFNFYNYLRTHPLLLRRHFGSSDTSSTHICLTVENGLADKINLGERRLF
FTTAYAHLKAGCPMLALEVLSKMPKVVKRSKLFCKSSSLVETSKDFSPLSPVKEFETKDQ
ASSIDWSQPVFNGLGSSSDCSSGKHSSSTLSFDWSQPSALFQDEQLQLQSDSDENEASED
SSLIMKELKPLKKTEKLHETGSSYTESFSIVDDKDILSPSEDIISAQLKFRACLKILTVE
LRTLSTGCEVDGGKLRYQLYQWLEREVVALQKTCDYGVEIDEIQSGVCGMPEEATLRENT
EDLADQEKTMLQKEDFQKRRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQE
SQQEQSVQIPSSPPPEQNSIPLLFACTASAKTVVANPLLHLSNLTHDILHAIINLDSPPH
PDTQNSKIYVMHTLAASLSACIYQCLCDGHSYSSFQANQFTGTVYQAVLLTQCHSLRTAS
LEETVTPNTSPAQWPGMTTLIRLLNSAGEEAQPGLTVLLCEILTAVYLSLFIHGLATHSS
NELYRIMAHPLNNKMWSAIFGGGAHTPSRGQQQLKTKTGRHFPMPSPHQVVVFSMECVGF
SKSLASFSTHSPTKPSDDGEKQQKHYRLSSKTSAKESSQLPALPLVDQQSSSYKERFIPP
ELSIWDYFIAKPFLPSQSGVEYDSEESQESDEDHEDNDGDMFASNSHNQEHSNSNSYSWS
LMRLAMVQLVLHNLKIFYPLAGHDLSELPVSSPICHAVLKTLQRWEQVLLRRLELYGGPP
QHYISVHASEDALAAGPALLRHKSLLEPTNTPFRSSSHVALSVKRLWQYLVKQEEVQETF
IRNIFTKRRCLNESLEEHNDTMKNSVVEEPIINKIETDLGYPGGKARIIHKESDIITAFA
VNKANRNCIAIASSHDIQELDVSAILATQIYTWVDDDMEIENKGADDFLVIHARDDLVNV
QGSTPYTHSNPGTPINMPWLGSTQTGRGASVEYSNKFNGIRKELARKEMLKKAINNVRRM
ASHPTLPYYLTGAQDGSVRMFEWGHEQQITCFRSGGNSRVTRMRFNYQGNKFGIVDADGY
ISLYQTNWKCCPLTGTSPKPYLTWQCHNKTANDFVFISSSSLIATAGFSSDNRNICLWDT
LVSPANSLVHAFICHDSGATVLAYAPKHQLLISGGRKGFTCVIDLRLKQQQQLLQSHDSP
VKAIAVDPTEEYFVTGSAEGNIKVWSLSAFNLLHTFINEHARQSLFRNIGTGVMQIETGP
ANHIFSCGADGTVKMRVLPDRFSPLKDVLKNDVKFMI
NT seq
9294 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgacgggcgccgtgaaccccggggacagctgcttctccgtg
ggcagcctgcacgaccagcccttcacggcatacgcatcaggatgtgatattgtggtactg
gggactgacttcgaacgattacagataatccctggagcaaaacatggaaacattcaagtg
ggatgtgtggactgttcaatgcaacaggggaagattgcagcctcttatggaaaggtgatt
tgtatctttgagccagttagcatcttgaagcagaacagcagtcatcataatgggttacat
taccagtggcagaagaatgctcaaatctcactggaagccatagtgcataatctaacatgg
gatcccacaggtactcgccttctgactggttccaatcgtcttcaactttggtccaacgtt
ccattggaaaaccctgctgacaatgatagtactgaaagagcaggtgttggacttggagag
tggagatgtatctggcaatgcaaaactgcttctcaagtttgtttaatgaaattctcacca
gatggggagttttttgctactgctggaaaggatgactgtcttgtgaaagtatggtacaat
gcagagaactggcggtcagccgtatcaccacctggtgccagtccagaaaaccaagcaaaa
gagcttgatttttcatttgtttacttggctcatcctcgatcagtaaatgcattttcatgg
agaaagaccagtaaattcatgccacgtggtgctgtctgcaatgtactcctgacttgctgt
aaggataatgtttgtcgtctctgggcagagactttgttacccaatgacagtttgttgtac
gggggaggatacagcaattggagtgaagcagtgaacttcacaaataacttcaagagaaat
acttcaagtaaagaaaaagtgcagagtgcattggagttaaacctgaggcacttccgacga
ggaaggaggaggtcaggtgccgttgtagcgcatactggatatgctctgcatcagcaagat
cctcatgaagctcacaggaacattcctcctcatgcaaatgccctttgccactaccatatt
gctgccagtatcaatccagccacagatattcctctactgccttctatcacatctctaagt
cttggtgaaaatgaagaaaaaagtggaccttttattgtacactggctaaacaacaaagaa
cttcattttaccttatctatggaagtgtttttgcaacaacttaaaaggagttttgaacat
cattcccctgagactaatactgaggattctaatcaaatggatggcagatcagaagaagaa
gctgatgaaaattcagatgaacagaaaggaaaccaagagaagaaggaactgggtgatgag
aaagctgctccatattcaagccttgttcctttatcctctgctatttttgatcatgaaatt
gaagttctgctttctgaatggagtaaaaatgctgacatgctcttcagtatacatcctatg
gatggctccctgctcgtgtggcatgtggactggctggatgaataccagcctggcatgttt
cgccaggtgcaggtgtcatttgtgtcaagaattcctgttgcatttcccacgggtgatgca
aactctctttgcagaagtatagtgatgtatgcttgtaccaaaaatgttgacttagctatt
cagcaaggcaaacaaaagcctcctggccttacacgatcttcatctatgcttatctcttct
ggacacagtaaatcaaccaacagcttaaaactaagtatcttcacacctaatgttatgatg
atttccaaacatgcagatgggtcactgaaccagtggctagtgagttttgctgaagaatct
gctttttcaactgtactcagtatttcacacaaatcccggtattgtggtcaccgttttcat
ctcaacgacttggcttgccactcagtgttaccactgctgcttacaacctcacatcacaat
gctctaatttcaccagatgttgagaaagcaatacagacaaatgagtcttctaagtctcag
gagtcaccagtaagacctcagagtagaggcaatgcaaatgtgacatcccaggatcccaat
gctgtttacagtgaacttattctatggagagtagatcctgttgggcctttgtccttttct
ggtggagtttctgaacttgctcggatcaattctcttcatgtttcagctttttctaatgtt
gcatggctgcccacacttatacccagctattgccttggtgcatactgtaattctccaagt
gcctgcttcgtggctagtgatggacagcatttaagattatatcaagctgtaatagatgct
aagaaacttctgtgtgagctctccaacccagaaatttctaaatatgttggagaagttttt
aacatcataagtcagcaatctacagctcgcccaggatgtatcattgaactggatgccatc
acagagcttcatggccggaaaacacagttattccatgtttttcaagaagactttatttta
aataaccaggagaaggaaatgccttcaaagaagatcagtttatcagactcaggaaaccag
cagaatggattctctgaaaaattctacttaatagtgatagaatatacacagaactgttca
ttactacatatgtggcatttacatttgaaagcaattcctgtctcaatagatgaaaagata
ggttcaaatccatctgaagaaacaacacaaacagaagaattgtattcttcaccagatcca
gagaagatccagtcacctttcactcaaaagtatcgggcctgtagagcaaatcttcagagt
accagctggcttactctgtcttccaaaatggtgtacagtcaagagttgagtatgccagaa
ggagtagaaataataagtgtaaagccatcagcaggacatctcagttcttcttccatatat
cctgtgtgtcgtgcaccttatctgctggctacttcctgctctgatggaaaagttcgattc
tggagatgtagggttgtcactgaagcttcttccatgccacaatatggcacagacagtgat
gttaaatatgtatgggaagaatggccattattgattgaggagggacttcctagtagtagt
gctattaatgttccagggaggccaactgatgtcagctgtgcacacacaaacagattagca
gtggcgtacaagcaggcagcatctagaaatagccatctttctcaagattttgtgatgcac
gttagtatttttgaatgtgaatctacagggggttcttcttggattttagaacagacactt
aaattagatgagctaggcaccatgttggactctggtgttagtgttgatagcgatttagtg
gcagataaccaacaagatacttctctgtctcatggtggaggtattatacccaacactaag
cacttggtacacttggattggatgtctagggaagatggttcacatattctgacagtggga
attggatcaaaactttatatgtttggtcaggtgtctgggaagaggcaggagcaaaatggt
aatgagattgctacagtctcccacagtggcagtcctaaggctgcgactctttctgggttt
gttttgctgcgttgtgttgacttggtttcatctgtggaggggtcacctccttttcctgta
tccttgtcttgggtgcgtgatggcattctggtagttggaatggattgtgaaatgcatgtt
tattcccagtggcaatccccttctaagcaggaactagttagtacagattcctacagtgga
agtatgccatgcctaactagcttaatgaaacaaagccagtcagtggcctcaggtctgcat
ccaccaaagagaactttgaccagatctatgaccagccttgcacagaaacttagtgggaaa
aggtctgcctctgatctgtctatggaaattgaagattctggtctatttgaagcagctcat
acattatctccaactttacctcagtaccatccatatcaactgttggaactcatggatctc
ggtaaagtacgcagagcaaaagccattctatcccacttggtgaagtgcattgctggagaa
gttgttgctgtaaatgagtctgagcctaaccatgacaggaggctcagatctctgacgatc
agtgccagtggaagcactgcaagagatcccaaaatgttcagtaaaacagagactacagac
tatatagaaatagactctgttccaccattgcctctgtatgctctgcttgctgcggatgat
gattcatcttattcctgttcagagaagtctaataatcagcatagtcaaaataaaaaggat
atgcccaatgacagttacgaaaatctcttccaaaatactgttataagtacagatgacctt
gtcacatttgaggcagatgaagacagttcaaaagtcattgatctttctcagtacagccca
acttactttggaccagaacatgctcaagttctttctcgtcacttgcttcactcaagcttg
ccaggtctgactaggatggagcaaatgtcattgatggccttggcagatacaattgctact
accagtactgacattggagaaagcagggacagaagtcagggtggagaaactctcgatgag
tgtggtttaaaatttttattggctgtccggcgtcacacctttctgacaactgcgcttcct
cctgtgcatcgagcccagctgcttcaccaaggtttatctactagtcactttgcctgggca
ttccattccgtagcagaggaagagctcctgagtatgctccctgcagtgcagaagggcgat
ccgacatggtctgagctcagagctatgggtgtaggatggtgggttcgaaacatccacagc
ctgcggaaatgcatagaaaaggtggctaaagcagctttccagagaaacaatgatccactt
gatgctgccattttttaccttgcaatgaagaagaaggctgttatctggggattgtacagg
tcccaaaaagatactaaaatgacacagttttttggaaacaactttactgaggacagatgg
cgtaaagcagccttaaagaatgctttttctttgcttggcaaacagcggtttgagcattct
gcagcgtttttcttgttggcaggacacttaaaagatgcagtggaggtctgccttgaaaaa
ctgcatgacattcagttggctcttgtaatatcaagactttatgaatcggagtttgaagtg
tctagtacttacaaatctgtactacagaagagagttttgggaagtgtgtctactggaaaa
gagagctcagggaacattcactgtgaccctttcttgcgaagcatggcatactggattttg
gaagattatagcaaggctcttgacactttgattaaacattctgttgaagatgaaggagat
gaaggggatggctcatcgagttgcaaccctgcagtgtttaacttctataactacctaaga
acacaccccctcttgctgaggcgtcattttggctcttctgacacatcttccacacacatc
tgcctaacagtagaaaatggattagctgacaaaatcaacctaggtgaaagacggctattt
ttcaccactgcatatgctcatctaaaagctggttgtcctatgttggccttagaagtgtta
tcaaagatgcccaaagttgtcaagaggtcaaagttattctgtaaatcctctagtttagtg
gaaactagtaaagatttctcaccattatctccagttaaagagtttgaaacaaaagatcaa
gcttccagtattgattggtcacagccagtattcaatggtctaggttcatcttcagattgc
tcatcaggaaaacattcaagttccactctttcctttgattggagccagccaagtgctcta
ttccaagatgaacaattgcaattgcagtcagacagtgatgaaaatgaagcaagtgaagat
tcttccctgataatgaaagagctaaaacctctgaagaaaactgaaaaattacatgaaaca
ggttctagctacacagaatcttttagtatagttgatgacaaagatattctgagtccatca
gaagatataatttcagcacagctgaagtttagggcgtgcctgaaaatccttactgtggag
cttcgtacgctatccactggctgtgaagttgatggtggaaagttgcggtatcagctttac
cagtggcttgagagagaagtggtagctcttcagaagacctgtgattatggtgttgaaata
gacgagatacagtcaggagtgtgcgggatgccagaggaagctacattacgtgaaaacact
gaagacttagctgaccaggaaaaaactatgctacagaaagaagactttcagaaacgacgt
caatggcttctgaagtatcagtctctcctcagaatgttccttagttactgtatacttcat
ggctcacacggtggaggcttggcatctgtcagaatggaattaattttgctcttgcaggaa
tctcagcaggagcagtcagtacagataccttccagccctccaccggagcaaaactccata
cctctcctatttgcttgcacagctagtgccaaaacagtggtggctaatccattgctacat
cttagcaatttaactcatgatatattacatgctataataaaccttgattcaccacctcat
ccagatactcagaacagcaagatatatgtaatgcataccttagcagcgtcgctctctgct
tgcatctaccagtgtctctgtgatggccacagctacagctcatttcaagcaaatcagttc
actggaacggtgtaccaggccgtcctattaactcagtgtcattctttaagaacagcaagc
ttagaagaaacagtgactcccaacacatcacctgctcagtggccaggaatgacgactcta
atacgtctcttgaattctgctggtgaggaagcccagccaggtctcacagttctactttgt
gaaattctaactgcagtctatctcagcctgttcatccatggccttgcaacacattctagc
aatgagttgtatagaattatggctcatccacttaacaacaaaatgtggtctgctatcttt
ggaggaggagctcatacacccagcagaggacagcagcaattaaagacaaaaactggtagg
cacttcccaatgcctagcccacatcaggtagtagtgttctccatggaatgcgtggggttt
tccaaatcccttgcctccttcagtactcatagtcctaccaagccttcagatgatggagag
aaacagcaaaaacattacaggctttcatcaaaaacctctgcaaaagagagttctcaattg
cctgcattgccattggtagaccaacaatcatcatcttacaaagaaagatttatccctcct
gagcttagcatctgggattatttcattgcaaagccatttcttccatcacaaagtggagtg
gaatatgattcagaagagagtcaggaaagtgatgaagatcatgaagacaatgatggagat
atgtttgcatcaaattcacataaccaagagcattctaattcaaattcttacagttggtca
ctgatgagattggcaatggttcagctggtacttcacaatttgaagattttctaccctttg
gctggacatgatctttcagagcttccagttagctccccgatatgccatgcagttttgaaa
actttacagcgctgggaacaagttcttctccgacgtcttgagctgtatgggggtccacct
caacattatatttcagttcatgcttctgaagatgctctcgctgctggtcctgcgttgctt
cgccacaaaagtttactcgagcctacaaacactcctttcagatctagcagtcatgttgcg
ctgtctgtgaagaggctctggcagtacttggtcaaacaggaagaagtccaggaaactttt
atcagaaatatttttaccaagaggcgatgcctaaatgagtcattagaggagcacaatgac
accatgaaaaattccgtggtggaggagcccatcatcaataagatagaaacagatttggga
taccctggtggcaaggcaagaataatccataaagagtcggacatcattactgcttttgca
gtcaataaggcaaatcggaactgcattgcaatagcatcaagtcatgatattcaagaattg
gatgtttctgcaattttagctacgcaaatctacacctgggttgacgatgatatggaaata
gaaaataaaggggctgatgatttcctagttatacatgctcgtgatgatctggtaaatgtt
cagggaagcactccttatactcacagtaatcctggcacacctatcaatatgccttggctt
ggtagtacacaaactggcaggggtgcatctgtggaatattcaaataaatttaatggaatc
agaaaggaattggcaagaaaagagatgctcaagaaagctattaataatgtcagaagaatg
gcttctcatccaacactgccatattacctgacgggtgctcaggatggaagtgtgagaatg
tttgaatggggtcatgaacagcagatcacatgttttcgatctggtggcaactcacgggta
actcgaatgcgattcaattaccaaggaaataagtttggaattgttgatgctgatggatat
ataagtttatatcagacaaattggaaatgttgtccacttactggaacttcacctaagcca
tatttgacatggcaatgtcataacaaaacagccaatgactttgttttcatcagttcatca
tcattgatagctacagcaggattttcttctgacaatagaaatatttgtctttgggatact
ttggtttctcctgcaaacagcttggtgcatgcttttatctgccatgatagtggagcaact
gtgctagcgtatgctccaaaacaccagctgttgatatctggaggcagaaaaggctttacc
tgtgtaattgatcttcgcctaaagcagcagcaacagttactccagagtcatgattctcca
gtcaaagcaattgctgttgatcctacagaagagtattttgtcacaggatctgctgaaggc
aacataaaggtatggagtctgtctgcatttaatcttcttcacactttcatcaatgagcat
gctcgacagtctctcttcagaaacattgggacaggagtcatgcaaattgaaacaggacca
gcaaatcacatattctcctgtggtgctgatggaacagtaaagatgagagtcctgcctgat
agatttagccctttaaaggatgtgttaaaaaatgatgtgaaatttatgatctaa
DBGET
integrated database retrieval system
