Agelaius tricolor (tricolored blackbird): 139588832
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Entry
139588832 CDS
T10815
Symbol
APTX
Name
(RefSeq) aprataxin isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03410
Base excision repair
Brite
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
139588832 (APTX)
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
139588832 (APTX)
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
139588832 (APTX)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
139588832 (APTX)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
139588832 (APTX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139588832
NCBI-ProteinID:
XP_071280645
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All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MERGRRLANQSTTPPPALSPDPAPPRAGGGVPAQCLPRPAPARRAAPALGGTELHRIRGA
GPAAAFPAPLRAFPPLTLRGPDSAPHRPAGGPARFTPLRLCQDPLPTPGSAGPVRLRRAT
RRGGSLCLVTSVMRVCWLVGKEKCTQRVKLPHLEAVVVGRGPETGITDKKCSRQQVQLKA
DCNKGYVTVKQIGVNPTSVDLVNIGKDEVVKMKPGQVLHIVNNLYPYTVQFAEESGETIP
ETDKMPHEGSCENDDIELVPRKTMKLEVVDTQGSSTNPKLSNTSVTTHEGTSSKKEHLGH
WSQGLKSSMQDPKMQVYKDEKIVVIKDKYPKARYHWLILPWDPISSLKSVTRDHLALLEH
MHAVGQKMIEQCPARESLEFRLGYHAIPSMSQLHLHVISQDFDSLSLKTKKHWNSFTTDY
FLNSQDVIEMVRSKGKVIVKDHTSELLKLPLRCHRCKQQLSTIPQLKEHLRKHWPK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggaaggcgcttggccaatcagagcacgactccgccgcccgctttgagcccg
gaccccgccccgccccgcgcggggggtggcgtccctgcccagtgtctgcctcgccctgcg
cctgcgcgccgcgccgctcccgccctcggaggcacagagctgcaccggatacggggcgcc
ggcccggccgccgccttcccggcaccgcttcgcgcctttccccccctcaccctacgcggg
cctgactccgcgccgcacaggccggccggcggcccggcccgcttcactccgctgcgcctt
tgccaggacccactgcccacccccggctccgcgggcccagtgcgcctgcgccgggccacg
cgccgcggcgggagcctttgcctggtcacctcagtgatgcgtgtgtgctggctcgtgggc
aaagagaaatgcactcagcgagtgaaactgccgcacttggaagctgtggtagttgggcgt
ggcccagagactgggataacggataagaagtgttcacggcagcaagttcagttaaaagca
gactgtaacaaggggtatgtcacagttaaacagataggggtcaacccaactagtgttgat
cttgtgaatattggcaaggatgaagtagtgaaaatgaagccaggccaagttctgcatatt
gtaaataacctttacccctacacggtgcaatttgccgaagagtctggggaaactattcca
gaaacagacaagatgccacatgaaggctcctgtgagaatgatgatatagaacttgtgccc
agaaaaacaatgaagttggaggtggtggatacacaaggcagttctacaaatccaaagcta
agcaataccagtgtaactacacatgaaggaacttcgagcaaaaaggaacatttaggacac
tggagtcagggtctaaagagctccatgcaagatccaaaaatgcaggtttacaaagatgaa
aagattgtagtcatcaaggataaatatcccaaagcacgttaccactggcttatcttacca
tgggaccctatttcaagcctgaagtcagtcaccagggaccaccttgcacttctggaacat
atgcacgccgttgggcaaaaaatgattgaacagtgccctgccagagagagcctggagttc
cgactgggttaccatgctatccccagtatgagtcagctacatttgcatgtaatcagccag
gattttgattctctgtccctgaaaaccaaaaagcactggaattcttttactacagactac
ttcttaaactctcaagatgtgatagagatggtaagaagcaagggaaaagtgatagtgaaa
gaccatacctctgaacttctcaaactccccctcagatgccatcgctgtaaacaacagctg
tccacaatcccgcagttaaaggaacatcttcggaaacattggccaaaatga
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