Agelaius tricolor (tricolored blackbird): 139588865
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Entry
139588865 CDS
T10815
Symbol
RNF38
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139588865 (RNF38)
Enzymes [BR:
atrc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139588865 (RNF38)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139588865 (RNF38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
VPS18_RING_C
zf-RING_UBOX
zf-RING-like
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
139588865
NCBI-ProteinID:
XP_071280700
LinkDB
All DBs
Position
Unknown
AA seq
660 aa
AA seq
DB search
MPVAARSAAPGAQPDAGFHAPARQRDRGVAPRGEESGGERHLRQAGEAGRRGRWVASSAA
PFLPAFSSSPPPPPASSVASSPAGGAAVAASTSPSAASLLPALPQTRARVRSCSGFPGLA
MSGGSGRLPPPAALCPPPPLHGPSLPEAGARSQGRGSPAGHGAPRGAPGSRAPPPGSIGT
AFQCHTIHQDHICTDDSDKSEDSPSPKRQRLSHSVFDYTAASPAPSPPMRPWEMTSNRQP
PLARPNQHHFSGERCNTPARNRRSPPVRRQRTRRDRLSRHNSISQDENYHHLSYGQQQAI
EEPRAFRPPNVSPRMLHPAAHPPQQNAVMVDIHDQIHQGTVPVSYTVTTVAPHGIPLCTG
QHIPACSTQQVPGCSVVFSGQHLPVCSVPPPMLQACSVQHLPVPYAAFPPLISSDPFLLH
PPHISTHHPPHLPPPGQFVPFQAQQSRSPLQRIENDVELLGEHLPVGGFTYPPSAHPPTL
PPSAPLQFLAHDPLHQEVSFGVPYPPFMPRRLTGRSRYRSQQPIPPHPYHPSLLPYVLSM
LPVPPAVGPAFSFELDVEDGEVENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNN
HQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASEVHRDSE
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggccgcccgctcggcagcccccggggcgcagcccgacgccggcttccatgcc
cctgcccgccagcgggaccgcggcgtcgctccgcgcggcgaggagagcggcggcgagcgg
cacctccgtcaggccggcgaggcgggccggcgcggcagatgggtggcttcttccgccgcc
cccttcctgcctgccttctcctcctcccctccgccgccccccgcctcctccgttgcctcc
tcccccgctggtggggccgccgtcgccgcctccacctccccctcggctgcttcccttctc
ccggcactcccccagacccgcgcccgtgtccgctcctgctccggcttcccgggactcgcc
atgagcggcggttccggtcgcttaccgccgcccgccgccctctgcccgccgccgcccctc
cacgggccgagcttgccggaggcgggagcgcggagccagggccggggcagccccgccggg
cacggcgcaccccgcggcgccccgggctccagagccccgccaccaggtagtattggtaca
gcgtttcaatgccacacaatccatcaagatcacatttgtactgatgacagtgacaagagt
gaagacagtcctagtcccaagcgacaacgcctttcccattccgtctttgactacacagca
gcatcaccagccccatcaccaccaatgcgaccatgggagatgacatcaaacaggcaacct
cctttggctcgacccaaccaacaccacttctcaggggaacgatgcaacacacctgcacga
aacaggaggagtcctcccgttcgacgtcagagaacaaggagagatcgtttgtctagacat
aattctattagccaggatgaaaactatcaccatctctcctatggacagcagcaagcaata
gaagagcctcgagcctttcgcccaccgaatgtatctcctcggatgttgcacccagctgct
cacccaccacagcagaatgcagtgatggttgacattcatgatcagatccatcagggcaca
gttcctgtttcatatacagtgacaaccgtggctccacatgggataccactttgcacaggc
cagcacattccagcctgcagcacacagcaggtcccagggtgctcagtggttttcagtggc
cagcaccttccagtttgcagtgtgcctcccccaatgcttcaggcgtgctcagtccagcac
ctacctgtcccatatgcagcatttccacccctcatttctagtgacccattccttttgcat
cctcctcatatctctacacaccaccctcctcacttacctcctccaggacaatttgttcct
ttccaagcacaacagtcacggtcgccacttcaaaggatagaaaatgatgtagaattgctt
ggagaacatcttcctgtaggaggttttacataccctccctcagcccatccaccaacgttg
cctccctcagctcctcttcaattcttagcccatgatccattacaccaggaggtgtcattt
ggggtaccttacccaccttttatgcctcgaagactcacagggcgcagcagataccgatca
cagcagccaataccaccacacccttaccatcccagcctattaccttatgtgctatcaatg
ctcccagtgccaccagcagttggaccagctttcagctttgagttggatgtggaagatgga
gaggtagaaaactatgaggcactgctgaatttggcagaacgtctgggagaagccaaacca
cggggattaacaaaagctgacattgagcagcttccatcctacagattcaatccaaacaat
caccagtcagagcagacattatgtgtggtgtgcatgtgtgattttgagtcaaggcagcta
cttagagtcttaccctgtaaccacgagttccatgccaagtgtgttgataaatggctgaag
gcaaatcgcacctgcccaatttgtagagctgatgcttcagaagtgcatcgtgattcagaa
tga
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