Agelaius tricolor (tricolored blackbird): 139589022
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Entry
139589022 CDS
T10815
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04512
ECM-receptor interaction
Brite
Lectins [BR:
atrc04091
]
C-Type lectins
Lecticans
139589022 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139589022
NCBI-ProteinID:
XP_071281076
LinkDB
All DBs
Position
Unknown
AA seq
2193 aa
AA seq
DB search
MKPSEKGWLLLLLPVVLRVVCSSFISVNLGVKVMKGQSVFLSEEDLNFSIPREKDVCKVE
VINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDKVMLRLYRFTETETFVETFT
LHVQLLEPDCNIIKMRSHALEVPEYYGLSRVIDKNVLTFDYDRKINLDCTISIISSETHL
PAHGQLIAGKVQQGQFGRDQPWSFFPDTKHRLGQQCRNRSCAQGLGDINNKKMSCEEFLR
MGIQYRHLDPPSPDTDYIPVRLDLSDSRSKTLHKTEYAWLPVQIRGAVPNQIPKAAPMAK
FILEVDQFILTPITTTTIDAEDNETPKSLLIFNITKPPPRGFITHLSDHTKPIGSFTWKD
LSDMLIAYQPPNNSHTERRSYEVEFEVHDFYFERSLPITVHLSIRTTDTNAPRVSWNTGL
NLLEGQSRPITWQHFQIVDNDDIQNVRLVTVDGLQHGQLSVRGGKGFMFTVSDIQAGVVH
YHHDDSDSTKDFVVFRIFDGSHSIRHKFPINILPKDDSPPFLISNVVIEVHEGQTILIQR
SMLHASDMDSSDHYILFNITKPPQAGEVLKKPGPNLLGYSVNSFLQRDLFNGMIYYHHLG
GEVFEDSLEFVLCDSHDPPNLSEPQVMMVHIIPVDDQLPREAPGVTRHLVVKETEISHLT
KKHLHFIDVEEQDRELTYTITTSPFFSCTHGYSDAGKLFMVDTIPKLVKDPTALALRSFT
QHAVNYMKVAYMPPLQDIGPEPQQVQFVFSVSNQHGGTLYGICFNITILPVDNQAPEVFA
THLRVQEGGTTPITEGHILISDSDTKQEHLFLLLQRQPQHGVVELKNVPMNGGDRLSCED
LRTLAVRYHHDSSETLTDEIFFAASDGIHFVEFILQVKVLPVNDELPVMQTGLVPMLHCL
EGEEVVLSSEYIYATDVDSDDMELVFMLARQPHHGVVSRAGTAVDRFSQADVIAGLVTYK
HTSGEIGLTPCIEILTLIVSDGEAGLDVEDCCYDGLPSPPVSRDDPFPVYDLNITVLPVD
NQPPSIVTGASFVVEEGSSAALTTKHLFATDPDTTADDLEFVLVSPPQFGYIENILPSPG
FEKSNIGISIGSFQLKHLKAMNINYVQARHVRMEPTEDKFVLYVTDGLHRSAETPFFVLI
SPTNDEVPEFIVRNITVQEGEMKELDLSVINAVDLDVPQDPLVFGVVQMPSYGFLINGVH
GSDVLHYKELINHDHHSHGLLVHDFSMELLRNGMKLMYMHDNSENLTDSFKIQLSDGKHK
VLRTISVNIIPVNDEKPALSKKNDIEVNIGETHIISSAVLSAEDKDTPRERIYYLFERIP
ENGQLQLKVGQGWVTLLTGMKCTQEELDMNLVRYVHTGTVGSKKKDSFTFYLWDGYNRSP
AVDFYINIKDLEKGDIAVFTKLLRVPKGDHSYITTDVLLALDGTDRPEELLYVITSPPQY
GQIEYVSYPGIPITSFSQMDVARQIVCYVHKAKAVVREDTFRFIISNGLRTKHGTFKIAL
EAADQALPTLSRNTGLRLTEGAMALLTPDVLQLSDPDTAKENLTFLLAQLPLYGHLYYNG
TVLLQCNFTQQDVDNRDVAYKHRGGNSQTDRFTFVASDRTNQGFIVNGKVQSEPVTFTIQ
ASVTTDLLKRDKFYDKVDHLDKMAPKITHLHCFSDVELLKNGNYGIYITARSLRASDPST
EDDKIIFKILRGPHYGYLENITTGGFIQEGFSQKDLNSKIILYVINKSREVNSDNLEFQV
TDASGNSAAPQRLELRWSRIEMLQTEYEVCENTGVVSLKITRAGHLGESAFITVKVHEIS
ARLGKDFTVTPSKLVQFDPGVSTKTWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKA
VVKILDSKGGQCSYSHSSGQSKHDFWGRHMLFPVSSGSSSPSRPGNVSLERIPLPPSKGM
RGHGGDLWQEHSLANRSRTRLRVTGNGRIVPPSSVFRNETDVIFKYHGIVSLKIEDDTSS
AETNKKAQPQINVISSRKTEIPLADKAELAAEPRSRHKDFNSFQKACTPDLKGLLHYEES
TQKLFQCDGISWKFWNSQSKEVTMKKCPSGWTYHEGSCYFLVVNHKVTWNIAAQACRDQY
LGSLTSVANEQHMQWLWDFSGKMPFWIGLNDQVNPGHWEWNGGEPVTYINWRRGSYHFSV
RGRNCVFVQKRGKWQATDCKKVKPNSYICSRKL
NT seq
6582 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctctgagaaaggctggctgcttctactgctgcctgttgtgttaagagttgtg
tgctcctcctttattagtgtgaaccttggggtgaaagtgatgaagggacaatctgtcttc
ctgtcagaagaagacctcaacttttccatccccagagagaaagatgtctgcaaagtagaa
gtgatcaatgagccaataacacagagggttgggaaactcactccacaggtttttgactgc
cacttccttcctaatgaagtcaaatatacccacaatggatgtccgattttagatgaagac
aaggtcatgcttaggctgtacaggtttacagaaacagaaacgtttgtagaaactttcacc
cttcatgtgcagttacttgagccagactgtaacatcataaaaatgcgctcccacgcgttg
gaggtccctgaatactacggtctgtccagggtgattgacaagaacgtcctcacctttgat
tatgacaggaagataaacctggattgcaccatttccataatctcttcggaaactcacctg
cctgctcatggccagcttattgctgggaaagtgcagcaagggcagtttggtagagatcag
ccatggagcttcttccctgacactaagcaccgcctgggccaacagtgcagaaacaggagc
tgtgcacagggactaggagatattaacaacaaaaagatgagctgtgaagaatttctgaga
atgggaattcagtatcgacatcttgaccccccctcacctgacactgattatattcctgtg
aggttggatctctcagacagcagaagcaaaactctgcacaagacggagtatgcatggctc
cctgttcagattagaggtgctgttcccaaccaaatacccaaagctgccccaatggcaaag
ttcatcctggaagtagatcaatttattttaacccctattacaaccacaaccattgatgct
gaagacaatgaaactccaaagtccctgcttatattcaacatcaccaagccacctccacga
ggctttatcactcacctctctgaccacacaaaacctattggctccttcacgtggaaggat
ctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagaggaggagt
tatgaggtggagtttgaggtgcatgacttctactttgaaaggagtttaccaatcactgtg
catctttctatcagaacaacagatacaaatgcccctcgggtttcatggaatacaggactc
aacctcctagaggggcaatcccgacccatcacatggcagcacttccaaattgtagacaat
gatgacatccaaaatgttcgcttggtcacagttgatggcttacagcatgggcagctctca
gtcagaggagggaaaggatttatgttcactgtctctgacattcaggctggagttgtccac
taccatcatgatgacagtgattctactaaggactttgtcgtatttagaatttttgatggc
tcccacagtattcgccataagtttccaataaatatcctccctaaagatgatagccctcca
tttctgatcagcaatgtggtcattgaagttcatgagggacagacaatcctgattcagcgc
tccatgctccatgcttcggacatggattccagtgatcactacatactattcaatattacc
aagccaccacaagctggagaagtcttgaagaaaccaggaccaaacttgctagggtattct
gtcaacagttttcttcagagggatctgtttaatggaatgatttattatcatcatttggga
ggagaagtatttgaagattcccttgagtttgtgctatgtgatagtcatgaccctccaaat
ctctcagagccacaggtgatgatggttcacattatccctgtggatgaccagctgcccaga
gaagctccaggagtgacccgccacctggttgttaaggagactgagatttctcacctaact
aagaaacatctccacttcatagatgtggaagagcaagacagggagctcacatacaccata
accacttccccatttttctcttgtacccatggctactcagatgctgggaagctgtttatg
gtggacaccatccccaaactggttaaggatcctactgctcttgcactgcggtcatttact
cagcatgctgtgaactatatgaaagttgcttacatgccacccctgcaggacatcggaccc
gaacctcagcaagtccagtttgttttttctgtcagcaatcagcatggaggcactttgtat
gggatttgcttcaatattacaatccttcctgtggacaatcaagccccagaggtttttgca
acccatttgagagtgcaagagggtggcacgacccctattacagagggacacattctcatc
tctgattcagacacgaaacaagagcatctcttcctgctcctgcagaggcagccgcagcat
ggggtagtggagctgaaaaacgttcccatgaatggaggtgacaggctttcctgtgaggac
ctgcgtaccctggcagtcagatatcatcatgacagctctgagactctcactgatgaaatt
ttctttgcagcctcagatggcatccattttgtagagttcatcctgcaggtcaaggtgttg
cctgtgaatgatgagctacctgttatgcaaacaggccttgttcccatgctccactgcctg
gagggtgaagaagtagtcctctcctcggagtacatttatgccacagatgtggacagcgat
gacatggagctggtgttcatgctggcccgccagccccaccatggggtagtgagcagagct
ggcactgccgtggatcgtttctcccaggctgatgtcatcgctggtttagtcacatacaag
cacaccagtggtgagattggcctgactccttgcattgagatcctaaccttgattgtctct
gatggcgaggctggcctagatgtggaagactgctgttatgatggacttccttccccccca
gtttcacgtgatgatccctttcctgtctatgatcttaacatcactgtgcttccagtggac
aaccagcctccatcaattgtaaccggtgcaagctttgtggtggaggagggctcctcagca
gcccttactaccaaacatttgtttgccactgaccctgacaccactgcagatgacttagag
ttcgtgctggtttctcctccccagtttggttacattgaaaacatactgccttctcctggg
tttgagaagagcaacattggaataagcataggttcatttcagctgaagcacctgaaagcc
atgaatataaactatgttcaagccaggcacgtgcgaatggagccaacagaagacaaattt
gtactttatgtcactgatgggctacatcgctcagcagagactccattttttgtgctaatc
agcccaaccaatgatgaagttccagaattcatagtcaggaatattactgttcaagaaggg
gagatgaaagagctggatctgtctgttatcaatgcagttgatctggatgtgcctcaagac
cctctggtatttggggttgtgcagatgccctcctacgggttccttattaatggtgttcac
ggcagtgatgttctgcactacaaagagttaattaaccatgaccaccacagccatgggttg
cttgttcatgacttttccatggaactactgaggaatggaatgaaactgatgtacatgcat
gacaactctgaaaatctcactgacagttttaaaattcagctatcagatggaaaacataaa
gtcctcagaaccatttcagtaaacatcattccagttaatgatgagaaaccagcgctgagc
aagaagaacgatatagaggtgaacataggtgaaactcatataatttctagcgctgttctg
tcagcagaagataaagatacccccagggagagaatttactacttatttgaaagaattcca
gaaaatggtcagcttcagctcaaggtaggacaagggtgggttactctcctaactggaatg
aagtgcactcaggaagagctggatatgaaccttgtgagatatgtccacacaggaactgtg
gggtccaagaaaaaagacagcttcacattttacctctgggatgggtacaacagatcccca
gctgtggacttctacataaatatcaaggacttggaaaagggagacattgctgtttttaca
aaactccttagagtgccaaaaggagatcacagctacattacaactgatgtcctccttgca
ttggatggtactgacaggccagaggagctcctttatgtgataacctccccaccccagtat
ggacaaatagagtatgtcagctatcctggcattcccattacgagcttcagtcaaatggat
gtagcacgacagattgtctgctatgttcacaaagccaaggcagttgttcgtgaagataca
ttcagattcatcatcagcaatggactgaggactaagcatgggacattcaagattgccttg
gaggcagctgaccaggctttgcccactctatctaggaacacggggttacgattaactgaa
ggagctatggcacttcttactcctgatgtactgcagctttcagacccagatactgcaaaa
gaaaaccttaccttcctcttggctcagctccccctgtatggtcatctctattataatggg
actgtgctactgcagtgcaatttcacacagcaagatgtggacaacagggatgttgcatac
aagcaccgaggtgggaattcccagactgacagatttacatttgttgcctcggataggact
aaccaaggcttcatcgtgaatgggaaggtgcagagcgagccggtgacattcaccattcag
gcaagtgtgaccacagacctacttaagagagataaattttatgataaagtggatcatttg
gacaaaatggcaccaaaaattactcatctccattgtttttctgatgtggaactgctgaag
aatggcaattatgggatctatattactgccaggtccctgagggcatctgaccccagtaca
gaagatgacaaaataatttttaagattttgcgaggtcctcattatggctatctggaaaat
ataacaacaggtggattcattcaggaaggatttagccaaaaggatttaaacagcaaaatc
atactttatgtcatcaacaaatcacgagaagtgaattcagacaacttggagtttcaagtg
acagatgccagtggaaactctgcagcaccccaaagattggagctacggtggtctcgaatt
gaaatgctacagactgaatatgaggtgtgtgaaaacacaggagtagtgtctctgaaaatc
accagggcaggacacctgggggagtctgcctttataaccgtgaaggtccatgaaatatct
gctaggctgggaaaggacttcacagtgactccgtccaagcttgttcagtttgatccagga
gtgtcaaccaagacgtggaatatagcaattacctatgatggattagaggaagatgatgaa
gtctttgaagtagttctgaactcccctgtgaatgctgttcttggcacacggacaaaagct
gtagtgaaaattttggactcaaaaggaggtcaatgcagctattcccattcttctggccaa
agcaagcatgacttctgggggagacacatgctgtttccagtttcctcaggctcctcatca
ccttccaggcctggcaatgtttccttggaaaggatcccactgcctccctccaaagggatg
agagggcatggaggggatctgtggcaggagcacagtttggcgaatcggtcacggaccagg
ctgagagtaactggaaatggcagaatagttcctccttcatctgtatttagaaatgaaaca
gatgtgattttcaaatatcatgggattgtatcactcaaaatagaggatgacacctcctca
gctgaaaccaacaagaaagcacaaccacagataaatgtaatctcctctaggaagacagaa
atcccactggctgataaggcagaacttgcagctgaaccaagatcaagacataaggacttt
aactcttttcaaaaggcttgtacaccagatttaaagggtctcttgcattatgaagaaagc
acacagaagttatttcagtgtgatgggatatcatggaaattctggaattcccaaagcaag
gaggtaactatgaagaaatgtccctctggatggacttatcatgagggcagctgctacttc
ctggtagtgaatcacaaggtcacctggaacattgctgctcaggcttgcagagatcagtac
ctggggagtctaacaagtgtagctaatgaacaacacatgcagtggctgtgggacttcagt
gggaagatgcccttttggataggtttgaatgaccaagtcaatcctggacactgggagtgg
aatggaggagagcctgtaacctacataaactggagaagaggctcctaccacttttcagtg
agaggaagaaattgtgtatttgtgcagaagcgaggaaaatggcaagcaactgactgcaag
aaggtcaaaccaaacagctatatatgttcaagaaagttgtaa
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integrated database retrieval system
