Agelaius tricolor (tricolored blackbird): 139589070
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Entry
139589070 CDS
T10815
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
139589070 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139589070 (SMARCA2)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139589070 (SMARCA2)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
139589070 (SMARCA2)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
139589070 (SMARCA2)
Chromatin remodeling factors
BAF complex
139589070 (SMARCA2)
PBAF complex
139589070 (SMARCA2)
GBAF(ncBAF) complex
139589070 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
139589070
NCBI-ProteinID:
XP_071281228
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHGQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHAMSGTAAGP
GAAPGMPGHTTAITPKTWTEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGVASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESNKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccaggaccagggccgtctcctggctccgtt
cacagcatgatggggccaagtcctggtccgcccagtgtcccacatccaatgccaacaatg
gggcctacagattatccacaggaaggcatgcatcaaatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatggccaaggttatatgtct
ccacatccatctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatagcaggagacccacaa
gttatgaatcagcctaacagagggccttcccctttcagccctgcacagctgcatcagcta
cgagctcagattctagcatacaaaatgctggctaggggtcagcccttgccagaaaacctc
cagcttgctgtccagggcaagagaaccctgcctggcattcaacagcagcagcctcccagt
gccttcaataggcagtctggtattggattacatgcaatgagtggcactgctgctggacca
ggggctgcaccagggatgcctggacatacaactgccattacccctaaaacgtggactgaa
ggccaagccccagatatgagcgtctccaatgcacagcaaaagcttccagcaccagctcct
agtgggaggccttctcctgctcctgctgctgcccagcctgctgccaccatgcctgggccc
tctgtaccacagcccccgccgggacaaccttcacccattgtccagctgcagcagaagcag
aaccgcatcagccctatccagaagccccaaggactggatcctgttgaaatactccaagaa
cgtgaatatagacttcaggctcgaattgctcacagaatccaggagctggagaacttgcct
ggttctctgccccctgatctgcggaccaaagctacagtagagttgaaggcacttcggtta
ctgaatttccaacgtcagttaagacaagaggtagtagcctgtatgcgtcgtgacacaaca
ctggagacagcgctgaactccaaagcctacaaacgaagcaagcggcagactttaagagag
gctcgtatgacagaaaagcttgaaaaacaacagaagatagaacaggagagaaagcgtagg
cagaagcaccaggaatacctgaatagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaagctttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaaaaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggccgaagatgaagaagggtaccgtaagctgattgatcaaaagaaagacagacgc
ctggcctacttgttgcagcaaacagatgagtatgtggctaatttgactaacctggtatgg
gagcataaacaggcacaggcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaggaaaatgcagaaggagtggcatctggtcttggtcctgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagacagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaaacaaattagaaacagatgagaagatacttctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaatcattgagacagcgaaacaagat
gtggatgatgaatatagcatgcaatatagtgctagagggtctcagtcctactacactgtt
gctcatgctatcactgaaagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggagtggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactaggaaagacaatacaaactattgctctgatcact
tacctgatggagcacaaaagactcaatggcccctatctcatcattgttcccttgtcgact
ttatccaattggacatatgaatttgacaaatgggctccttcagtggtgaagatatcttac
aagggtacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttacgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaatactcactatgtggcccctcggcgaatcctactgactgggactcctttg
cagaacaaattgcctgaactttgggctctcctcaatttccttcttccaaccattttcaag
agctgtagcacctttgagcagtggttcaacgctccatttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctgatcatccgtcgtctgcataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgagtctcaactcccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtatcgtcacatgcaagctaag
gggatccttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
cttatgaacactatcatgcaattgagaaagatatgcaatcacccatacatgtttcaacac
attgaggagtccttcgctgaacatctgggctactcaaatggggtcattaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgagct
actaaccatcgcgtgcttcttttctgtcaaatgacatcactcatgaccattatggaagac
tactttgcatttcgaaatttcctttacctgcgcctcgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctggatcgcaatactttatcttccttctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacactgttataatcttt
gacagtgactggaatcctcatcaggacttgcaggcccaggatagagctcaccgaattggt
cagcagaatgaagttagagtcctgagactgtgcactgtgaacagtgtggaagagaagata
cttgctgcggcaaagtataagctgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaagtcttcaagccatgaaaggagagctttcctccaagctatattggagcatgaa
gaagaaaatgaggaagaagatgaagttcctgatgatgagacactgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaagat
gccagaaaccctaaacgtaaacctcgcttgatggaggaggatgaattaccatcctggatt
attaaggatgatgctgaagttgaaaggctcacatgtgaagaagaggaagagaaaatattt
gggagaggatcccgtcagcgcagggatgtggactacagtgatgctctcacagagaaacag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaagagacgaagaaacgtggataaggactctgggaaggaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagagaagttgtcgcccaatccacccaaactgaca
aaacaaatgaatgccatcattgatactgtgataaactacaaggacagttcaggacggcag
ctaagtgaagtcttcattcagctcccatctaggaaagaactaccagagtattatgaattg
attaggaaaccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttggaaaaagatgtcatgttgctgtgtcacaatgcacagacattcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaggaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaggaagaagaatcggaatcagaatcaaaatcagtgaaagtcaaaatcaagttgaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
