Agelaius tricolor (tricolored blackbird): 139589266
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Entry
139589266 CDS
T10815
Symbol
NIPBL
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139589266 (NIPBL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139589266 (NIPBL)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
139589266 (NIPBL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
139589266
NCBI-ProteinID:
XP_071281625
LinkDB
All DBs
Position
Unknown
AA seq
2777 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNGRIAEEVNCLLACRDEN
LVSQLIHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAILARNPNVFREKSMQNRYGVQS
GMMMSQFNISQNSMRGSPASSNYQQTTISHSPSSRFVPPQTSSGNRFLAQQNSPVPSPYA
PQSPAGYMPYSHPPSYTAHPQMQQASVSSPIVTAGMRNLHENKVSSQLPGNSANHHADNS
RHGSNEDYLQMVHRLSSDDGDPSIRNAASFSLRSPQSVCSPAGSDGALKGSRQPLIQQSQ
PPPYSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQTEKAAMYDIISSPSKDSTKLTL
RLSRVRSSDMDQQDDMLSGLENSSVSEGDIPFNVQYPGQTSKTPVTPQDVNRPLNAAQCL
PQHEQTAFLQAQQVPVLQQNTSVAAKQPQTPVVQTQQQVSQQGAITSYDEVELDALAEIE
RIERESAIERERFSKEVQDKDKPLKKRKQENKPPEAGGATGGNRTASQETGSAGNGARPA
LMVSIDLQQAGRADSQATVTQDLDTIKKPEEIKQYNDGFMCVPQEDTVGVLKFKPENHPE
IFRKKSDFESQKTDIQQNENRQMEFQQNESRRLESKYNESKQLEVKHESRQMEMKQNENR
QTELKQNESRQMEMKQNEGKQNNGKQEIRQRPETPKQKSEGRPETPKQKSEGRPETPKHK
HDNRRDSSKPLSDKKIEIPRHKLDVKSDPSRMKPENRPDPTKPRPDGRSVSDTPRRDHDS
LKQRSEDRGESERYRGDPSKIRRPEYLRSSNKNEHDSKHGIKPDGSKPEKFERKYRHESG
DSRFSSGDQKSRPDSPRIKQESKGDSSKSRPDKPGFKSPNSKDERRTDGNKSKVDSNKAH
GDNKAEFPSYLLGARSGALKHFVIPKIKRDKDGNVTQESRKTEFRGEHKDKVEKIGLVED
LNKGAKPVVVLQKLSLDDVQKFIKDREDKSRGSCFKPNKNKSTKPNKGSIDQSVLKELPP
ELLAEIESTMPLCERVKMNKRKRSTVNEKPKYAEISSDEDNDSEEAFESSRKRHKKDRDE
AWEYEEHDRRSSGDHRRSGHYHEGRRISGSGRYRNRSPDDSDMDDYSPPPSLSEVARKMK
KKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASIENILENLEDMDFTAFGDDDEIPQELLL
GKHQLSELGSESAKIKAMGIMDKLSTDKTVKVLNILEKNIQDGSKLSTLLNHNNDTEDEE
RLWRDLIMERVTKSADACLTAINIMTSPNMPKAVYIEDVIERVIQYTKFHLQNTLYPQYD
PVYRVDPHGGGVLSSKAKRAKCSTHKQRVIVMLYNKVCDIVSSLSELLEIQLLTDTTILQ
VSSMGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNF
RLNSSDTDGEPMYIQMVTALVLQLIQCVVHLPSADKDSNSEEESNKKVDQDVLITNSYET
AMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFIQDLLSTVNKPEWPAAELLLSLLGRLLV
HQFSNKSTEMALRVASLDYLGTVAARLRKDAVTSKMDQGSLARILKQVSGGDDEIQQLQK
ALLDYLDENTEIDASLVFSRKFYVAQWFRDTTMETEKAIKSQKDEDSSEGTHHAKDVETT
GQIMHRAESRKKFLRSIIKTAPSQFSTLKMNSDTVDYEDACLIVRYLASMRPFAQSFDIY
LTQILRVLGENAIAVRTKAMKCLSEVVAVDPSILARLDMQRGVHGRLMDNSTSVREAAVE
LLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILRDICIEQPTFPKITEMCVKMI
RRVNDEEGIKKLVNETFQKLWFTPTPHHDKEAMTRKILNITDVVAACRDTGYDWFEQLLQ
NLLKSEEDASYKPVKKACTQLVDNLVEHILKYEESLSDSDNKGVNSGRLVACITTLFLFS
KIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICNVAKILELVVPLMEHPSETFLATIEEDL
MKLIIKYGMTVVQHCVSCLGAVVNKVTQNYKFVWACFNRYYGALSKLKNQHQEDPNSTIL
TANKPALLRSLFTVGALCRHFDFDQEDFKGNSKVNIKDKVLELLMYFTKHSDEEVQTKAI
IGLGFAFIQHPSLMFEQEVKTLYNNILSDKNCSVNLKIQVLKNLQTYLQEEDTRMQQADR
DWKKVAKQEDLKEMGDISSGMSSSIMQLYLKQVLEAFFHNQSSVRHFALNVIALTLNQGL
IHPVQCVPYLIAMGTDPEPSMRNKADQQLVEIDKKYAGFIHMKAVAGMKMSYQVQQAINT
CPKDPVRGFRHDESSSALCSHLYSMIRGNRQHRRAFLISLLNLFDDTAKTEVNMLLYIAD
NLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQSFKESMVKDKKKDRKPSSGEESESDSN
SGSGSESEAEASKPRRLRKRVDSDSDSDEENDINAVMKCLPENSAPLIEFANVSQGILLL
LMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGVHFHPKQTLDFLRSDMANSKI
TEEVKRSIVKQYLDFKLLMEHLDPDEEEEDGEVSASTNARNKAITSLLGGGSPKNNAAET
EDDESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVDVMDVIAICCPKYKDRPQIARV
VQKTSNGFSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTIKESDIIYKKIALTSANKLTNK
VVQTLRSLYAAKDGTSS
NT seq
8334 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccatcactactcttgcagggattgctagtctcacg
gaccttttgaaccagctgcctcttccatcacctttacctgctaccacaacaaaaagcctg
cttttcaatggacggatagctgaagaggtgaactgccttctggcttgcagggatgaaaat
ctggtttcacagctcatccacagtctcaatcaggtgtcaacagatcacatagagttgaaa
gataaccttggcagtgatgatccagaaggagatataccagtcttgctgcaggctattctg
gcaaggaatcctaatgttttcagggagaaaagcatgcaaaacagatacggggtacaaagc
ggaatgatgatgtcacagtttaatatttctcagaattccatgcgtggtagtcctgcatct
tcaaattatcaacaaaccactatctcacatagcccttccagccggtttgtgccaccacag
acaagctctggtaacagatttttggcacaacagaacagtccagtgcctagtccatatgct
cctcaaagccctgcaggatacatgccatattcacatcctccaagttatacagctcatcct
caaatgcagcaagcttccgtatccagtcccattgtcacagctgggatgaggaatctccat
gaaaataaagtttcaagtcagttgcctggaaattcagctaatcatcatgctgataattct
agacatggctcaaatgaagactacctacagatggtgcacagactcagtagtgatgatggc
gatccttcaataaggaatgctgcatccttttccttgaggtcaccacagtcagtctgctct
ccagctggaagtgatggagcccttaaaggatcaagacaacctttaatccaacaatctcag
cctccaccttattcatcacctagagatgttcccccagacatattgttagattctccagaa
agaaagcaaaagaaacaaaagaaaatgaagttaggcaaggatgaaaaagaccagactgaa
aaagctgcaatgtatgatatcattagctctccttccaaggactccactaagcttacatta
agactgtctcgtgtaagatcttcggatatggaccagcaggatgatatgctttctggtttg
gaaaacagcagtgtgtcagagggtgatattccttttaatgtgcagtacccaggacagact
tctaaaacacccgttactccacaggatgttaaccgcccactaaacgctgctcagtgtttg
ccgcagcatgaacagacagctttccttcaggcacaacaagtgcctgttttacaacagaac
acttcagttgctgcaaaacaacctcaaactcctgtggtacagacacagcaacaggtttcg
caacaaggagctataacgtcatatgatgaagtagaattggatgcattggctgaaattgag
cggatagaacgtgaatcagctattgaaagggagcgattttcaaaagaagtgcaagataaa
gataagcctttaaagaagcgaaaacaagaaaacaaaccaccagaggctggaggtgctact
ggaggaaatagaacagcttctcaggagacaggttctgcaggaaatggggcaaggccagca
ctgatggttagtattgatctgcagcaagcaggaagagcagactctcaggcaacagtaact
caggatttggacaccatcaaaaaacctgaagaaattaagcagtataatgacgggtttatg
tgtgttccccaagaagacactgttggagttcttaaatttaaacctgaaaaccatccagaa
atttttaggaaaaagtcagactttgaaagtcaaaagacagatatccagcaaaatgaaaac
agacaaatggaattccagcaaaatgagagcagacggttggaaagtaaatacaatgagagc
aagcagttagaagtgaaacatgaaagcagacaaatggaaatgaaacaaaatgagaacaga
cagacagaattgaaacaaaatgagagcaggcaaatggagatgaaacaaaatgagggaaaa
caaaataatggcaaacaggaaatacggcaaaggccagaaacaccgaaacagaagagtgaa
ggcagacctgaaacaccgaaacagaagagtgaagggaggcctgaaacacctaaacacaaa
catgataataggagggactccagtaaacctttgtcagacaagaaaattgaaatacctagg
cacaaactagatgtgaaatctgatccttcaaggatgaaacctgaaaatcgacctgatcca
acaaaaccaaggcctgatgggcgctcagtttctgatacaccaaggcgtgaccatgacagc
cttaaacaaagatctgaggacaggggggagtcagagagatacagaggagatccatccaag
atcagaaggcctgaatatttgagatcctcaaacaaaaatgaacatgattctaagcatggt
attaaacctgatggttcaaaacctgagaaatttgaaaggaaatataggcatgagtctggt
gattcaaggttttcttctggggatcagaaatcaaggcctgacagccctcgtattaaacag
gaaagtaaaggggattctagcaaatcaagacctgataaacctggttttaagtcaccaaac
agcaaggatgaacgaaggacagatggtaataagagtaaagtagatagtaataaagcacat
ggtgacaataaagcagagtttcccagttatttgttgggggcaagatctggtgcattgaaa
cattttgtcattccaaaaatcaaacgtgataaagatggcaatgttactcaggagtcaagg
aaaactgaatttagaggtgaacataaggacaaagtagagaagattgggctagttgaagat
ctaaataaaggagctaagcctgtagttgtccttcaaaagctttctttggatgatgtgcag
aaatttattaaggacagagaagataaatcaaggggctcttgttttaaacctaacaagaac
aagtcaaccaaacctaataaaggtagcatagatcagtcagtgttaaaggagttgcctcct
gagctcctggcagagattgaatccaccatgccactttgtgaacgtgtgaaaatgaacaag
cgcaaacgtagcacagttaatgagaaaccaaaatatgctgaaatcagttctgatgaagat
aatgacagtgaagaagcttttgaatcttctcgtaagagacacaaaaaggatagagatgaa
gcttgggagtatgaagagcatgacaggagaagttctggtgaccataggagaagtggtcat
taccacgaaggaaggaggatttctggtagtggccgttaccgtaatcgcagtcccgatgac
tctgatatggatgattattctcctcctcctagcctcagcgaggtggctagaaaaatgaag
aagaaagaaaaacaaaagaagaggaaagcttatgaacctaaactaacacctgaagaaatg
atggattcttcaaccttcaaaaggtttactgcttcaatagagaatattttggaaaatctg
gaagacatggattttacagcttttggtgatgatgatgagattccacaggaattgcttctg
ggcaaacatcagcttagtgagttgggtagtgaatctgcgaaaatcaaggcaatgggcatt
atggacaagctctcaacagataaaacagtaaaagttctgaatattttggagaagaatatt
caagatggatccaagctttctactttacttaaccacaataatgacactgaagatgaggag
agattatggcgagatcttattatggaaagagtgacaaaatctgctgatgcttgtcttact
gctatcaatattatgacatcaccaaatatgcctaaagctgtatatattgaggacgtaata
gaaagagttattcagtacacaaaatttcatttgcagaacactctctatcctcagtatgat
cctgtgtatagagtggatcctcatggtggtggtgttttaagttcaaaagcaaaacgtgcc
aagtgttccacccacaagcaaagagttatagtgatgttgtataacaaagtttgtgacatt
gtcagcagcttgtcagagttgctggagatacagcttctcactgatacaactattcttcag
gtgtcatcgatgggaataacacctttctttgtagaaaatgtcagtgagctacagttatgt
gccatcaaattagtgactgcagtgttttcccggtatgaaaaacacagacagctaatatta
gaagaaattttcacttcccttgcacggctaccaactagcaagaggagtttgagaaacttc
aggttaaacagcagtgacactgatggagagcctatgtacattcagatggtaacagcacta
gttctgcaacttattcagtgtgtggtgcacttaccatcagcagacaaggattctaattca
gaggaggaatcaaacaagaaagtggatcaagatgtgcttattaccaactcatatgaaaca
gccatgaggacagcacaaaatttcctttctatttttcttaaaaagtgtggcagtaaacaa
ggggaggaagattacaggccactgtttgagaactttattcaagatcttctttcaacagtc
aataaaccagaatggccagctgcagagttgctacttagtttactaggaaggctattggtt
caccagttcagtaacaaatccacagaaatggcattaagagttgcatctcttgactatctt
ggaactgtagcagcaagactgaggaaagatgcagtcactagcaaaatggatcaaggatct
ttagccaggatcctcaaacaggtttcaggaggagatgatgaaattcaacagctgcaaaag
gctttactagattatctggatgagaacacagaaattgatgcatcattagtgttttctcgg
aagttttatgtagctcagtggttccgtgatacaactatggagacagaaaaagcaattaaa
tctcagaaggatgaggattcatctgaaggaactcatcatgcaaaagatgttgagaccaca
ggacaaatcatgcatagagcagaaagtcgcaaaaagtttcttcgcagcatcattaaaact
gctccatctcagttcagcacattaaagatgaattctgatactgtggactatgaagatgca
tgtttgattgttcgctacttggcctctatgaggccgtttgcccagagcttcgatatttat
ttgacacagattctgcgtgtacttggtgaaaatgcaattgctgttcgaacaaaagccatg
aagtgtttgtctgaggttgttgctgtagaccccagcattctagccaggctggatatgcaa
cgaggagttcatgggcggctaatggataactccactagtgtacgagaagcagctgtggag
ctgcttggccgatttgtgctctgtcgtcctcagcttgctgagcagtattatgacatgctg
attgaaagaatactggatactggtatcagtgtcagaaaaagagtcataaaaatacttagg
gatatctgcattgagcaaccaacttttcccaaaattacagaaatgtgtgtgaaaatgatt
cggagagtcaatgatgaagaaggcattaagaaattagtaaatgagacattccagaagctc
tggtttactccaactccacaccatgacaaagaagcaatgacaaggaaaatactaaacatc
actgatgtggttgcagcttgtagagatacagggtatgattggttcgaacagcttcttcaa
aatctgttgaagtcagaagaggatgcctcatataaacctgtgaagaaagcctgtactcaa
cttgttgacaatttggtcgagcacattcttaaatatgaagaatctttatcagattctgac
aataaaggtgtgaattccggtcgcttggttgcttgcataaccactttgttcttgttcagc
aaaataaggccccaactaatggtcaaacatgccatgaccatgcagccatacctgaccact
aaatgtagtacccagaatgatttcatggtgatctgcaatgttgcaaaaatcttggagctt
gtagtgccactaatggagcacccaagtgagacctttcttgccactattgaggaggacctc
atgaaactcatcatcaaatatggcatgacagttgttcagcactgtgtgagctgccttggg
gctgttgtgaacaaggtcacccagaactataaatttgtgtgggcctgttttaatagatac
tatggtgcactttctaaattaaaaaatcaacaccaagaagaccccaacagtacaatactt
actgccaataaaccagcactccttagatcacttttcactgttggagcactgtgccggcat
tttgattttgatcaggaagattttaagggcaacagtaaggttaacattaaggataaagtc
cttgaactgctgatgtattttacaaagcattcagatgaagaagtacagacaaaagccatt
attggtcttggatttgcatttatacagcacccaagtttaatgtttgaacaagaagtgaag
actctgtacaacaatattctttcagataagaactgttcagtaaacttaaaaatccaggtg
ttaaaaaacctccagacctacttgcaggaggaagatacacgtatgcagcaggcagacaga
gactggaaaaaagtagcaaaacaggaagacctgaaagaaatgggtgatatttcctcaggg
atgagtagttccatcatgcagctatatctcaaacaggtccttgaggctttctttcataac
cagtccagtgtacgccactttgctctaaatgtcattgcactgacattaaaccaaggtctc
atccatcctgttcagtgtgtgccatacttaattgctatgggcacagatccagagccctct
atgcgaaataaagctgaccaacagttggtggaaatagacaaaaaatatgctgggttcatt
cacatgaaagcagtggctggtatgaagatgtcttaccaagtacagcaggcaattaatacc
tgcccaaaagatcctgtgagaggttttagacacgatgaatcatccagtgcactgtgttca
cacctctactccatgattcgagggaaccgtcaacacagacgagcctttctaatttcttta
ctcaacctgtttgacgatactgcaaaaacagaggtgaatatgcttttgtacatagcagac
aatctagcctgttttccttaccaaacacaggaagagccactctttataatgcatcatata
gacattacactatcagtttctggtagcaacctactacagtcatttaaagagtctatggtg
aaagacaaaaaaaaggatagaaagccttcatcgggggaggagtccgaaagtgacagtaac
agtggcagcgggagtgaaagtgaggcggaagcttctaagcctcggaggttacggaaacga
gtggactctgattcagattctgatgaagaaaatgatataaatgcagtgatgaagtgttta
cctgaaaattcagctcctttaattgaatttgctaatgtgtcccaaggcatattattactt
ctgatgctgaaacagcatctaaagaacctctgtggattctctgatagtaaaattcagaaa
tactctccatctgaatctgcaaaagtttatgataaagctataaacaggaagacaggagtg
catttccatccaaaacaaactttggattttctgcggagtgatatggctaattccaagatc
acagaagaagtgaagaggagtatagtaaaacagtacttagatttcaagctccttatggaa
catttggatcctgatgaagaggaagaagatggagaggtgtcagctagcacaaatgctcgg
aacaaagcaattacctcgctgcttggaggaggcagccctaaaaacaatgcagctgagaca
gaggacgatgaaagtgatggggaggatagaggaggaggcacttcagggtcattgagaagg
tcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgatgtc
atggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacaaattgcaagagta
gtacagaaaaccagcaatggcttcagtgttcagtggatggcaggctcctacagtggctcc
tggactgaggctaagcgccgtgatggccgcaaactggtgccttgggtagacactattaaa
gagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaataaa
gttgtgcagactttacgatcgctgtatgccgccaaggatggaacttccagctaa
DBGET
integrated database retrieval system
