Agelaius tricolor (tricolored blackbird): 139589274
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Entry
139589274 CDS
T10815
Symbol
SKP2
Name
(RefSeq) S-phase kinase-associated protein 2 isoform X1
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04068
FoxO signaling pathway
atrc04110
Cell cycle
atrc04120
Ubiquitin mediated proteolysis
atrc04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
139589274 (SKP2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
139589274 (SKP2)
04150 mTOR signaling pathway
139589274 (SKP2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
139589274 (SKP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
atrc04121
]
139589274 (SKP2)
Ubiquitin system [BR:
atrc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
139589274 (SKP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_4
LRR_6
F-box_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
139589274
NCBI-ProteinID:
XP_071281653
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MLQGSPSCVWCQSGSTLRASGFCCVCRKHLQEIPSSSTNVSSSLEWDPGKTSELLSGMGV
SALKKDKLGNENTPQDLLVSSSCLPPKRQKVKDNEKDFVIVRRPWLLREAESGISLDALP
DELLLAIFAYLPLKDLLKVSMICKRWHRLSFDESLWQTLDLTGGNLLPGVLGQLLPAGVT
VFRCPRSCIGDPLFKTSNLLKIQHLDLSNCTVSAADLHSILCLCEKLQNLSLEGLVLSDN
IIKSIARNPNLIRLNLCGCSGFSAEALELMLSSCSMLEELNLSWCEFTATHVKAAVSHVT
SKITQLNLSGYRENLQIADVKTLVERCPLLVHLDLSDSMMLKPECFQYFKQLVFLQHLCL
SRCYQISPAALVELGEIRTLKTLQVFGIVTDSSLQLLEEALPDMKINGSHFTSIARPTVG
NKKSHEIWGIKCRLTLRNPSFL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaggatccccatcctgtgtttggtgccagtctggcagtaccctcagagcctct
gggttttgctgtgtctgcagaaagcacctccaggagatcccatcctctagcactaatgtt
tcctccagcttggaatgggaccccggcaagacctccgagcttctctcgggtatgggagtg
tcggcccttaagaaagacaagctgggcaatgaaaacacaccacaggacctcctggtgtcg
tcgtcctgtcttcctccaaaaaggcagaaggtgaaggacaacgaaaaggactttgttatc
gtgcgccggccatggctgctccgagaggcagagtcaggtatttctttggatgcacttcca
gatgaattgcttctggcaatctttgcctatttgcccctaaaggatttactgaaagtttct
atgatttgcaagagatggcatcgactttcatttgatgaatctctctggcagactcttgat
ttgactggtgggaatctgctgccaggagtgcttggacagttgttgcccgcaggtgttact
gtgttccgctgcccgaggtcttgcattggggatccgttgtttaaaacaagcaatcttctt
aaaattcagcacctggatttgtcaaactgcacagtgtctgctgcagatctccacagtatt
ctttgtctgtgtgaaaagctgcagaacctcagcttggagggtctagtgctttctgacaac
atcatcaagagcattgctagaaatcccaatttgatacgactaaatctctgtggctgctca
gggttttctgcagaagccttggagctgatgttgagcagttgttctatgctagaggagctg
aacttgtcctggtgtgaattcacagccactcacgtcaaagcagcagtcagtcatgttact
tcaaagatcacccagttaaatttaagtggatacagagagaatctacaaatagcagatgtg
aaaacgttggtggagagatgtcctttgcttgtccatttagatctcagtgacagcatgatg
ttaaagcctgagtgcttccagtattttaaacaacttgtgttcctacaacacctgtgcctt
agccgatgttaccagatatcacctgctgccttagtagagcttggtgaaattcgaacactg
aagactcttcaggtgtttggaatagtgactgatagctccctgcagctcctcgaggaagca
ctacccgacatgaagatcaatggttcacactttaccagcattgcaaggccaactgttggc
aataaaaagagccatgagatttggggcatcaaatgcagattgacactgagaaatcctagt
ttcttgtga
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