Agelaius tricolor (tricolored blackbird): 139589412
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Entry
139589412 CDS
T10815
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
139589412 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139589412 (MYO5B)
04131 Membrane trafficking [BR:
atrc04131
]
139589412 (MYO5B)
03029 Mitochondrial biogenesis [BR:
atrc03029
]
139589412 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
atrc04812
]
139589412 (MYO5B)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
139589412 (MYO5B)
mRNA cycle factors
P-body specific factors
139589412 (MYO5B)
Membrane trafficking [BR:
atrc04131
]
Others
Actin-binding proteins
Myosins
139589412 (MYO5B)
Mitochondrial biogenesis [BR:
atrc03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
139589412 (MYO5B)
Cytoskeleton proteins [BR:
atrc04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
139589412 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
5_3_exonuc
AAA_22
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
139589412
NCBI-ProteinID:
XP_071281972
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MSAAQLYTKYTRVWIPDPDEVWRSAEIIKDYKEGDKSLQLKLEDETLYEYPIDLPGSELP
FLRNPDILVGQNDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGIVLVAINPYEQLPIYE
QDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGESGAGKTVSAKYAMRFF
ATVGGSASETNIETKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFDKRYHIIGANMR
TYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLGLTCAEDFFYTSQGGDTSIDGVD
DADDFEKTRHAFTLLGVKESHQMTIFRIIAAILHLGNLKIQGERDGEVCSISSEDEHLSS
FCSLLGVEHSQMQHWLCHRKLVTTAETYVKSMSLHQVVNARNALAKHIYAQLFNWIVQHI
NKALHTTVKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYMK
EGIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWAQKLYDRHAASQHFQK
PRMSNTSFIVLHFADKVEYQSEGFLEKNRDTVYEEQINILKASQYQMVADLFQEEKDAVP
ATAVAKRMPRINVRSAKPAFKAANKEHRKTVGHQFRNSLQLLMETLNATTPHYVRCIKPN
DEKLPFKFDPKRAVQQLRACGVLETIRISAAGFPSRWSYPDFFNRYRVLMNKRDLSKNDK
KQICQTLLEDLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAATIMIQKTVRGWLQR
ARYQRLRRATLALQRYARGHLARRLFQHLRRTRAAIILQKQYRMLRMRRAFLRVCSATLT
IQAFARGMFVRRIYHQMLMEHKATILQKYARGWLARVRFRRAQAAAVVLQCHWRRLRARR
QLQALRIEARSAQHLKKLNIGMENKVVQLQRKVDEQNKENKLLNEQLSMLTSAHSSEVEK
LKKELQQYQQTQQGDGKQLLSLQEETERLRMELERAHGEREVLEDSHGKERDLLRKRICD
LEEENALLKQEKEELNSRILCQSEDEFARNTVEENMQMKKELEEERSRYQNLVKEYASLE
QRYDNLRDEMTIFKQTPGHRRNPSNQSSLESDSNNPSICTSEIGDTEDVIQQVEEIGMEK
AAMDMTLFLKLQKRVRELELERKKLQAQLEKKEQESKKSQVNEIKTEVTSEHEDFAYNSL
KRQELESENKKLKNELNELRKAIADHATQNNSNDVQDGYNLLLNQLKSANEELEVRKEEV
LILRSQIMKAAQQKETGKNMVKERESISPNASWPNSDRHVDQEDAIEAYQGMCETNRKTE
DWGYLNEDGELGLAYQGLKQVARLLEAQLQDQRREHEEEMEALKNQVDLMQEELEKQQQA
FLQTLQLSPEVQVEFGLQQEITRLTNENLDLKELLEKLEKNEKKLKKQLKIYMKKVQDFE
ASQTTVPVERRPHERNMQVAVQRKEKDFQGMLEYYKEDEPLLIRNLITDLKPQAVSATVP
CLPAYILYMCIRHADYINDDQKVHSLLTSTINGVKKVLKKHQDDFEMTSFWLANTCRLLH
CLKQYSGEEGFMTQNTAKQNEHCLKNFDLTEYRQVLGHLSIQIYQQLINIAEGILQPMIV
SAVLENESIQGLSIVKPVGYRKYSSNAGDSSYSLDEMIRQLNTFHSIMCDQGLDPEIIQQ
VFKQLFYMINAIALNNLLLRKDVCSWSTGMQLRFNISQLEEWLHGKNLQQSGAAQTLEPL
IQAAQLLQLKKKTSEDAEAICSLCTSLTTQQIVKILNLYTPVNEFEERVTVAFIRNIQKQ
LQERNDPPQLLLDFKHMFPVLFPFNPSAITMDSIHLPASLNLDFLNKV
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcgcagctctacaccaagtacactagggtttggattcctgaccctgatgaa
gtttggagatcggcagaaattatcaaggattacaaagagggagataaaagcctccagctg
aaacttgaagatgaaactctctatgagtatcccattgacctgccagggagtgagctgccc
ttcctgcgcaacccggacatcctggtggggcagaatgacctgacagccctcagctacctg
cacgagcctgctgtcctgcacaacctcaaagtcaggttcctcgagtccaaccacatctac
acctactgtggtatcgtgctggtggccatcaacccctacgagcagctgccaatctacgag
caggatgtcatctacgcctacagcggccagaacatgggggacatggacccccacatcttc
gccgtggccgaggaagcctacaagcagatggccagggatgagaagaaccagtccatcatt
gtcagcggggagtcgggggcgggcaagacggtctctgccaaatacgccatgcgcttcttc
gccaccgtcgggggctccgccagcgagaccaacatcgaaaccaaagtcctggcctccagc
cccatcatggaggccattggaaatgctaaaacaacaaggaatgacaacagcagccgcttt
gggaaatacattcagattggctttgataaaagataccacatcattggggccaacatgagg
acatatctgctggaaaaatctcgggttgtgtttcaggcagaggacgagcgcaactaccac
atcttctaccagctctgtgcctcctcaagcctcccagaattcaaagaccttggactcacg
tgtgccgaagactttttctacacttctcagggaggtgacacatccatcgatggcgtggac
gatgctgatgactttgagaaaaccagacatgccttcaccctgcttggagtgaaggagtct
caccagatgaccatttttaggataattgctgccattctgcacctggggaacttgaagatc
caaggggaacgagacggggaggtctgcagtatatcgagcgaggacgagcacctgagcagc
ttctgcagcctgctgggcgtggagcacagccagatgcagcactggctctgccaccgcaag
ctcgtcaccacggccgagacctacgtgaagagcatgtccctgcaccaggtggtgaacgcc
aggaacgccctggccaagcacatctatgcccagctcttcaactggatcgtgcagcacatc
aacaaggccctgcacaccactgtgaagcagcactccttcatcggcgtgctcgacatctac
gggtttgaaacttttgaagtgaatagctttgaacagttctgtatcaactatgccaacgaa
aagctccagcagcagttcaactcgcacgtgtttaagctggaacaagaagagtacatgaag
gagggaatcccctggactctcatagacttctacgacaaccagccctgcatagacctgata
gaggccaagctggggatcctggacctgctggatgaagagtgcaaggtgcccaagggcacg
gaccagaactgggcgcagaagctgtacgaccgccacgccgccagccagcacttccagaag
ccgcgcatgtccaacacctccttcatcgtcctgcacttcgccgacaaggtggagtaccag
agcgaggggtttctggagaagaacagggacactgtgtacgaggagcagatcaacatcctg
aaagccagccagtatcagatggtagcagacttattccaggaggagaaggacgctgtgccc
gccactgccgtggcaaagagaatgccccggatcaacgtgcgctctgccaagccagccttc
aaagctgccaacaaggagcacaggaaaacagtgggacaccagttccgcaactccctgcag
ctgctgatggagaccctgaacgccaccaccccgcactacgtgcgctgcatcaagcccaac
gacgagaagctccccttcaagtttgatcccaagagagcagtgcagcagctgagagcctgc
ggagtgctggagaccatccggatcagtgcagctggcttcccatccaggtggtcctaccct
gactttttcaataggtaccgtgtgcttatgaacaagagagacctctctaagaacgacaag
aagcagatctgtcagaccctgctggaagacctcattaaggatccagacaagttccagttt
ggccgtaccaagatctttttccgtgcaggccaggtggcatatctggagaagctgcgggca
gataagttcagagctgccaccatcatgatccagaagacggtgcggggctggctgcagagg
gccaggtaccagcggctgaggcgagccaccctcgccctgcagcgctacgcccgcgggcac
ctggcacgcaggcttttccagcacctgaggaggacgagggctgccatcatcctgcagaag
cagtaccgaatgctgcggatgcgccgggccttcctgagagtctgcagcgccaccctcacc
atccaggcttttgctcggggcatgtttgtcaggaggatttaccaccagatgctgatggag
cacaaggccaccatcctgcagaagtacgcccggggctggctggcccgcgtgcggttccgc
cgggcccaggctgccgccgtggtgctgcagtgccactggcggcgcctcagggcccggcgc
cagctccaggccctccgcatcgaggcccgctcggcacagcacctcaagaagctcaacatc
ggcatggagaacaaggtggtgcagctgcagaggaaggtggacgagcagaacaaggagaac
aagcttctgaatgagcagctgtccatgctgacatcagcccactcctccgaggtggagaag
ctgaagaaggagctgcagcagtaccagcagacccagcagggcgatggcaagcagctcctc
agcctgcaggaggagacggagcggctgcggatggagctggagagggctcacggggagagg
gaggtgctggaggacagccacggcaaggagagggacctgctgaggaagcgtatctgcgac
ctggaagaagaaaatgctctcctgaagcaggaaaaagaggagctgaacagcaggatcctc
tgtcagtctgaagatgaatttgcacgaaacacagttgaggaaaatatgcagatgaagaaa
gagctggaagaagagagatctcgttatcagaacctggtaaaagagtatgcaagtctggag
cagagatatgacaacttgagagatgaaatgactatttttaagcaaacaccagggcacagg
agaaacccatccaaccagagcagcttggagtctgattccaacaacccgtccatctgcacc
tctgagattggggacaccgaggatgtgatacagcaggtggaggagattgggatggagaaa
gcagccatggacatgaccctcttcctaaagctacagaagcgagtgagggagcttgagctg
gagaggaagaagctgcaagcccagctggagaaaaaggagcaagagagcaagaaatcccag
gtaaatgaaataaagactgaagtgacttcagaacatgaagattttgcatacaacagcttg
aagaggcaagagctggagtcggagaacaagaagctgaaaaatgagctcaatgagctgagg
aaggccattgcagaccacgccacccagaacaactccaatgacgtgcaggacggctacaac
ctcctcctgaaccagctgaaatcggccaacgaggagctggaggtgcgcaaggaggaggtg
ctcatcctcaggtcacagatcatgaaggctgcccagcagaaagagactgggaaaaacatg
gtaaaggagagggagagcatctcccccaatgccagctggcccaacagtgaccggcacgtt
gaccaggaggacgcgatcgaagcctaccagggcatgtgtgagaccaaccgcaagactgag
gactggggctatctcaatgaagatggagagctcggcttggcttatcaaggtttaaagcaa
gttgccaggctgctggaagcacagctccaggaccagaggagggagcatgaggaggagatg
gaagctctgaaaaaccaggtggatttaatgcaagaggagctggagaagcagcagcaggca
ttcctgcagactctgcagctctctccagaggtccaggtggagtttggacttcagcaagaa
attacacgtctgaccaatgaaaacctggatcttaaagaattgctggaaaagttggaaaag
aatgaaaagaagctgaagaagcagctgaagatttacatgaagaaggtccaagattttgaa
gcatcccagacaacggtgccagtggagaggagaccacacgagcggaacatgcaggttgct
gtccagaggaaggagaaggattttcagggcatgctggaatattacaaagaagatgagcca
ctgctcatcagaaacctcattacagatctcaagccccaggcagtgtctgctactgttccc
tgccttcctgcttacatcctctacatgtgcatcagacatgcagattacatcaacgatgac
cagaaggtgcactccttgctcacctccaccatcaacggtgttaagaaagtgctgaagaag
caccaggatgactttgagatgacatcgttctggctggcaaacacgtgccggctgctgcac
tgcctgaagcagtacagtggggaagagggtttcatgacccaaaacacggcaaagcagaac
gagcactgcctgaagaacttcgacctgaccgagtaccggcaggtgctgggccacctctcc
atccagatctaccagcagctcatcaacattgcagagggcatcctgcagcccatgatcgtg
tctgctgtgttggaaaatgagagtatccaagggctttccattgtcaaaccggtgggctac
aggaaatactcctccaatgcgggtgacagctcctacagcttggatgaaatgattcgccag
ctgaacacattccacagcatcatgtgtgaccagggcctggacccagagatcatccagcag
gtgttcaagcagctcttctacatgatcaatgccatcgccctgaacaacctcctgctgagg
aaggatgtctgctcgtggagcacgggcatgcagctgaggtttaacatcagccagctggag
gaatggctgcatgggaagaatctgcagcagagtggagcagcacaaactttggagcccttg
attcaggcagcacagctcctgcagctgaagaagaaaacctcagaggatgctgaggccatc
tgctccttgtgcacgtctctcacaacccagcagattgtaaagatactgaatctctacact
cctgtgaatgagtttgaagaacgtgtgacagtagctttcatacgaaacatacagaagcag
ttgcaagaacggaatgaccctccacagctgcttttagacttcaagcacatgttcccagtt
ctgttcccattcaacccatctgccatcaccatggactccattcatctccctgcttctctc
aacttggattttctcaataaagtctga
DBGET
integrated database retrieval system
