Agelaius tricolor (tricolored blackbird): 139589682
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Entry
139589682 CDS
T10815
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04137
Mitophagy - animal
atrc04140
Autophagy - animal
atrc04148
Efferocytosis
Brite
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
139589682 (HIF1A)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139589682
NCBI-ProteinID:
XP_071282334
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Position
Unknown
AA seq
819 aa
AA seq
DB search
MDSPGGVTDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVESPEMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSGSQSAGSIPLFQQ
QQQQQQGQAGSGSPEEVKLKAQERGDEVKPIVVPSSPPRGGPEPSSAPASPYGGSRSRTA
SPIRAGKGTVEQVEKPSPGAPSLLTVTLNERSTALDEELNPKMLALHNAQRKRKMEHDGS
LFQAVGIGSLFQQTGDRGGNASLAWKRVKGCKTNGHSGVEQKTIILLSTDIASKLLGQSM
DESGLPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccggcggcgtcaccgacaagaagaggattagctcagaacgcaggaaagag
aagtcgcgggatgcggcgcggtgcaggaggagcaaggagtcggaggtgttctatgagctg
gcccaccagctgcccctgccccacactgtcagtgcacacctggacaaggcctccatcatg
aggctcaccatcagctacctgcgcatgaggaagctgctggatgccggtgagctggagaca
gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggctttgtc
atggttctgtctgaagatggggacatgatttacatgtctgaaaacgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagtgtatttgattttactcatccatgtgac
cacgaggagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
cagaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtgaatataaagtctgctacatggaaggtgctgcactgcactggccacatccgtgtg
tacgacacgtgtgggaaccagactcactgtggctacaaaaagcctcccatgacctgcctg
gtgttgatctgtgaacctattcctcacccatcaaacattgaggtccccctggacagtaaa
acgttcctcagtcgtcacagtcttgacatgaaattttcctattgtgatgaaagaattaca
gagttgatggggtatgagccagaggagctcttgggtcgctcaatctatgagtattatcac
gcactggattctgatcatctgaccaaaacacaccatgacatgttcacaaaagggcaggtg
acaacaggacagtacagaatgctggccaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtgaactat
gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg
ctgaaaccagtggagtctcctgagatgaaaatgaccaaaatattcagtaaagatgacctg
gatgataccaacagcctatttgaaaaacttaaacaggaaccagatgctttaactgtgcta
gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactc
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagccactcgaactttcttttaccatgcctcaggtgcaagaacaaccaaccagcccttct
gatgcaagtaccagccaaagttcccctgagcccagtagtcccaacgactactgctttgat
gtggataatgatatggccagtgaattcaaactggaattagtggagaaactctttgccata
gatacagaagcaaaaaatccattctctactcaggaaaccgatttagatttagagatgttg
gctccttacatcccgatggatgacgacttccagctgcgctccttcgatcagctgtccccg
ctggagagcagcagctcgtccggctcacagagtgcaggcagcatccccctgttccagcag
cagcagcagcagcagcagggccaggcaggctcgggcagccccgaggaggtgaagctgaag
gcacaggagcgcggggacgaggtgaagccgatcgtggtcccttcctcgcccccgcgcggg
ggccccgagcccagcagcgcccccgcctcgccctacggggggagcaggagtcgaactgcc
tcacccatcagggcagggaaaggaacggtggagcaggtggaaaagccttctccaggagca
cccagcttgctaacagtcactctcaatgaaagatctactgcactggatgaagaactaaat
ccaaagatgctagctttgcataatgctcagagaaaacgaaaaatggaacatgatggttca
ctttttcaggcagttggaattgggtctttattccagcagacaggtgaccgtggaggaaat
gcatcacttgcttggaaacgtgtaaagggatgcaaaacaaatggtcacagtggagtggag
caaaagacaatcattctactatcaactgacatagcaagtaaacttctagggcagtcgatg
gatgagagtggactcccccaactcacgagttacgactgcgaagtaaacgctcccatacag
ggcaacagaaacctgctacagggggaagaactgctcagagctctggatcaagttaactga
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