Agelaius tricolor (tricolored blackbird): 139589875
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Entry
139589875 CDS
T10815
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
atrc04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139589875 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
139589875 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139589875 (SNW1)
Spliceosome [BR:
atrc03041
]
Complex B
Other components
Prp19-related factors
139589875 (SNW1)
Complex C
139589875 (SNW1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
139589875
NCBI-ProteinID:
XP_071282826
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MALTSFLPAPTQLSQDQLELEERARAQRSRQAALVSSRREPPPYGYRKGWIPRVLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIREITEKTRAALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRPSNEIQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSN
SDRNTRGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHESKKRRKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaacccagctatcccaagatcagctagagcta
gaagaaagagcaagagctcagagatccaggcaggctgctctggtctcatccagaagggaa
cctcccccatatggttaccggaaaggatggataccgcgagtgctagaggattttggagat
gggggtgctttcccagaaattcacgtggcccaatatccattggatatgggccgaaagaag
aaaatgtccaatgctttggctgttcaggtggatgcagaaggaaaaataaaatacgatgca
atcgctcgacaaggacagtcaaaggacaaggtcatttacagcaagtacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcctgaactgcaaagaccagatgaggaggcaatt
agagagataacagagaagacaagagcagccttggagaaatcagtctcccaaaaagttgca
gcagccatgccagttcgagctgctgacaaactagctcctgcacagtacattcggtacaca
ccatctcagcaaggagttgcgttcaactctggagcaaaacagagagttattcggatggtg
gaaatgcagaaggaccctatggagcctccaagattcaaaattaacaagaagattccacga
ggaccaccatctcctccagcacctgtaatgcactctccaagtagaaagatgactgtgaaa
gagcagcaagagtggaaaattcctccatgcatttcaaactggaaaaatgcaaagggttac
accattccattagataagcgtctggctgcagatggcagaggattgcagaccgttcatatt
aatgaaaactttgccaaacttgctgaggccctctatattgctgacagaaaggctcgggag
gcagtagagatgcgtgcccaggtggagaggaagatggctcagaaagaaaaggaaaaacat
gaggaaaagctcagagaaatggctcagaaagccagggagagaagagcagggatcaagacc
cacgttgaaaaagaggatggagaagctagagaaagagacgaaatcagacatgacaggcgc
aaagagaggcagcatgacagaaatctttcccgggcagcccctgataaaaggtcaaagctg
caaagaaatgagaacagagatatcagtgaagttattgccctgggggtaccaaaccccagg
ccatccaatgaaatccagtatgaccagaggctgttcaaccagagcaagggtatggatagt
ggctttgctggaggagaggatgaaatttataatgtttatgaccagccttggagaagtggc
aaggatatggcccaaaacatctacaggccaagtaaaaatctggataaagatatgtatggt
gatgatctagaggctcgaataaagaccaacaggtttgttcctgacaaagagttttctaac
tcggatcgtaacaccagaggcaggggcagagatggaccagttcaatttgaggaggatcca
tttggtttggacaagtttctggaggaagccaagcaacatggtggttctaaacggccatca
gacagcagccgccctaaggaacatgagcatgagagcaagaagaggaggaaggactga
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