Agelaius tricolor (tricolored blackbird): 139589944
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Entry
139589944 CDS
T10815
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03013
Nucleocytoplasmic transport
atrc03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139589944 (PNN)
Spliceosome [BR:
atrc03041
]
Complex C
Other components
EJC/TREX
139589944 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139589944
NCBI-ProteinID:
XP_071282956
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Position
Unknown
AA seq
694 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPPQNRLLALAGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGASSRLGGERRTRRESRQESDAEDDDIKKPALPSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVAIATERQKRRQEIEQKLE
VQAEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTK
PHLFYIPGRMCPATQKLMDESQKKMNALFESRRNEFAEQINKMEARPRRQSVKEKEHQEV
QNEEKKEEQNKEQEEGKVAQQVEEMETGNQHNDVEMEEVGEEKGKISSGSGHSDAEKEQE
EDEQKHDVEMKVEEPTEVRENDKQQDGQHEEVTVVKDESENIQPVDNDQDVAEMNEADSV
EPVENENGREIEPETECDAQPEKVCNVPSPKKEKGIKTENNAELEETQEKTPEAQTESVA
EALSQPQSVPLAQSPQLSQSTQDTEPQTDKDENAVVSVKVAEAQAELNQTPSAESKSKTR
SGSRGRAGNKTGHTRSSSSSSSSTSSSTTSASSSSTGSSSSRSSSTSSSTTSGSTSRDSS
SSSSSSSESRSRSRGRGHNRDRKRRRSTDRKRRDASGVDRSHKSSKGGSRDTKSSKDKSS
RSDRKRSISESSRSGKRTSRSERDRKSDRKDKRR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcggtgcgtgcgctgcaggagcagctggagaaagccaaggaaagcctcaag
cacgtggacgagaatatccgcaagctcacgggccgggaccccaatgatgtgcggccccct
caaaacaggctgctagccctcgcaggccccggtggaggtagagggcgtgggagcttattg
ctaaggcgtggattctcggatagtggaggaggacccccagccaaacagagggatcttgaa
ggtgcatccagtaggctgggtggagaacgtcggacaagaagagaatcacgccaagaaagc
gacgcagaggatgatgatattaaaaagccagccttaccatcttctgttgttgctacctcc
aaagagcgaacacgtcgagaccttatacaagatcaaaatatggatgagaaaggaaaacaa
aggaatcgacgtatatttggcttgctgatgggcactcttcaaaaatttaaacaggagtcc
acagttgctattgctactgagaggcaaaagagacgacaagaaattgagcagaaacttgaa
gtgcaggcagaggaagagagaaagcaagttgaaaatgagaggcgagaactgtttgaagaa
agacgtgctaaacagacagagctgcggttattggagcaaaaggttgagcttgctcagttg
caagaagaatggaatgaacataatgctaaaataatcaaatacataagaacaaagacaaaa
cctcatttgttctacatacctggcagaatgtgtcctgctacgcagaagctgatggacgag
tcacagaaaaagatgaatgcgctctttgaaagcaggagaaatgaatttgcagagcagatt
aacaaaatggaggccagacccagaagacaatctgtgaaggaaaaagaacatcaggaggtg
cagaatgaagaaaagaaggaagaacagaacaaggagcaggaagagggtaaggtggctcag
caggtggaagagatggagacaggtaatcagcacaatgatgtagaaatggaggaggtaggg
gaggaaaagggaaaaataagttcaggttcagggcatagtgatgcagaaaaagaacaggaa
gaggatgagcagaaacatgacgtagagatgaaagtagaagagcctactgaggtgagggag
aatgacaaacagcaggatggtcagcatgaggaggtcacagttgtaaaagacgaaagtgaa
aacattcagcctgtggataatgatcaggatgtggctgaaatgaatgaggcagatagtgta
gaacctgtagaaaatgaaaatggcagagaaatagaaccagaaacagagtgtgatgctcag
ccagaaaaagtgtgtaatgttccttctcccaagaaggagaaaggtatcaaaacagaaaat
aatgctgaactggaagaaacacaagagaaaacacctgaagctcagacagaatctgtggct
gaggctctatctcagccacagtctgtgccactagcacaatcacctcagttgtctcagtcc
actcaggatacagagccccagacagacaaggatgaaaatgctgtggtgtctgtaaaggtg
gctgaagcccaggcagagctgaatcagacaccgagtgcagaaagtaagagtaagactagg
agtggaagcaggggtagggcagggaacaaaactggtcatacccgtagcagcagcagcagt
agcagtagcacttccagcagtactaccagtgcaagtagttccagtactggcagcagttcc
agtcggagcagttccaccagcagcagcactacaagtgggagtacgagcagggacagtagc
agcagcagctcgagcagtagtgagagcaggagtcggagccgaggcaggggccataacaga
gatagaaaacgcagaaggagcacagacaggaagcgaagggatgcttcaggagtagataga
agtcacaagtcctcaaaaggtggtagtagagatactaaaagctcaaaggataaaagttca
aggtctgacagaaagagatctatatcagaaagtagtcggtcaggcaagagaacttcacgg
agtgaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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