Agelaius tricolor (tricolored blackbird): 139590074
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Entry
139590074 CDS
T10815
Symbol
SRSF5
Name
(RefSeq) serine/arginine-rich splicing factor 5 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
atrc05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139590074 (SRSF5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
139590074 (SRSF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139590074 (SRSF5)
Spliceosome [BR:
atrc03041
]
Common components
Common spliceosomal components
SR proteins
139590074 (SRSF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
RRM_5
DUF2202
Motif
Other DBs
NCBI-GeneID:
139590074
NCBI-ProteinID:
XP_071283273
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGK
ELCSERVTIEHARARSRGRGRGRYSDRFSSRRPRSDRRNAPPLRTENRLIVENLSSRVSW
QDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYSDLKNAIEKLSGKEINGRKIKLIEGSK
RHSRSRSRSRSRSRSSSGSRSRSRSRSRKSYSRSRSRSRSKSRSVSRSPLPSKSQKRASS
SRSKSPSSVDRQRSRSRSRSVDSGN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcggctgccgcgtcttcatcgggaggctgaacccggccgccagggagaaggatgtg
gagaggtttttcaaggggtacggccgcatccgcgacatcgacctgaagaggggcttcggc
ttcgtggagtttgaggatccgagggatgcagatgatgctgtttatgaattggatggaaaa
gaactttgcagtgaaagggtgaccattgagcatgccagagcacgctcgaggggcagaggc
agagggaggtactctgaccggttcagtagccgccgcccgcgcagtgacaggagaaacgcc
ccacctctaagaacagaaaatcgcctcatagtggaaaatttgtcttcccgtgtcagctgg
caggatctcaaagacttcatgaggcaagccggggaagtaacctttgcagatgcacacaga
cctaagttaaatgaaggggtggttgaatttgcctcttacagtgatttaaagaatgctatc
gaaaagctttctggtaaagaaattaatggaaggaaaatcaaactaattgaaggcagcaaa
aggcacagtaggtcccggagcaggtcacggtcacgcagcaggagctcctctggctcgcgc
agccgctctcgttcccgcagccgcaagtcctacagccggtcacgcagcaggagccgcagc
aagtcgcggtcagtcagcagatctccgctgcccagcaagagccagaaacgggcttcttcc
agcagatccaaatctccatcatccgtagacaggcagaggtctagatcaaggtccagatct
gttgacagtggcaactga
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integrated database retrieval system
