Agelaius tricolor (tricolored blackbird): 139590128
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Entry
139590128 CDS
T10815
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04140
Autophagy - animal
atrc04148
Efferocytosis
atrc05132
Salmonella infection
Brite
Membrane trafficking [BR:
atrc04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
139590128 (VPS39)
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Other DBs
NCBI-GeneID:
139590128
NCBI-ProteinID:
XP_071283402
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Position
Unknown
AA seq
884 aa
AA seq
DB search
MHDAFEHVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIKKDVGEVMSSESVCCNRF
EVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTISKAKGASLFTC
DLQQSDTGEEVLRMCVAVRKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFK
RDYYLIRVDGKGSIKELFPTGKQLEPLVAPVADGKVAVGQDDLTVVLNEEGVCTQKCALN
WTDIPIAMEHQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGTNIIYVASNHF
VWRLIPVSIATQIQQLLQDKQFELALQLAEMKDDSDSEKRQQIHHIKNLFAFNLFCQKRF
DESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQ
KRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRL
ENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQY
LQHLGTENLHLVFSYSVWVLRDFPEDGLKIFTEDLPEVEALPRDKVLSFLIENFKSLTIP
YLEHIIHVWEETGADFHNCLIQLYCEKVQGLMKEYLSSFPADRAPVPAGEEGGDLGDYRK
KLLLFLEKSSCYEPSRLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTNMAENY
CHKHYDRNKDGNKDVYLSLLRMYLSPPSVHCLGPIKMEVLEPQANLQAALQVLELHHSKL
DTTKAINLLPANTQISEIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQV
KCIITEEKVCTVCKKKIGNSAFARYPNAIVVHYFCSKEVNTLDT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagcatgtgccgatcctggagaagctgccgctgcagatcgactgc
ctggcggcctgggaggaatggcttcttgttggtacaaaacaagggcatcttctgctttac
aggatcaagaaagatgtaggagaggttatgtcatcagaaagtgtctgttgcaacaggttt
gaagtgacactagagaaatccaacaagaacttctcaaagaagattcaacagatccatgtt
gtttctcaatttaaaattttggtcagtctattagaaaataacatttacgtccatgacctg
ttgacatttcaacaaatcaccacaatttcaaaggcaaaaggtgcatctctcttcacttgt
gatctccagcaatcagatacaggggaggaggtgctgaggatgtgtgtggcagtccgtaag
aagctccagctttatttctggaaggacagggagttccatgagctccagggggacttcagt
gtacctgatgtacccaagtctatggcatggtgtgaaaactccatctgtgtaggcttcaag
agggactattacctgatacgggtggatggaaaaggatccatcaaagaactgtttcccaca
gggaagcagctagaaccattggtagctcctgtagcagatggaaaagttgcagttggccaa
gatgatctaacagttgtgcttaatgaagaaggggtctgtactcagaaatgtgccttgaat
tggacagatattcctatagccatggaacaccagcctccctacatcattgctgtcctgcca
aggtacgtggagatccgcacctttgagccccggctgctggtgcagagcatcgagctgcag
aggccgcgcttcatcacctctggaggcacaaacattatatatgtggcaagtaatcacttt
gtttggaggctcattccagtgtccatagccacacagatccagcagcttctgcaggacaag
cagtttgagttggctttgcagttggcagaaatgaaagatgattcagatagtgagaagcga
caacaaatccaccacataaagaacctctttgccttcaacctgttctgccagaagcgcttt
gatgaatccatgcaagtttttgcaaagcttggtacagatcccactcatgtgatgggtctg
tatcctgacctcctgcccacagattacaggaaacagctacagtatcccaaccccctgcca
gggctctctggggcagagctggagaaggcacatttagctctgatagactacctaactcaa
aaaaggagtcagctagtgaagaagctaaatgattctgatcatcagtccagtacctcaccc
ctcatggaaggaacacccacgatcaaatccaaaaagaagctgctacaaatcattgatacc
accctcttaaagtgttacttgcatacaaatgtagcactggtggcaccactgctacgtctg
gagaacaatcactgccatattgaggagagtgagcatgtactaaagaaggcacacaagtat
agtgagctgataatactgtatgagaaaaaaggtctgcatgagaaagcattacaggtactg
gtggatcagtcaaagaaagccaactcccctttgaagggtcatgagaggacagtgcaatat
ttgcagcatttgggcacagagaacttgcacttggtattttcctactctgtctgggtgcta
agagattttcctgaagatggactgaagatatttacagaagacctccctgaagtggaagct
ttgccacgagacaaagtgctcagtttcttgatagaaaattttaaaagcttgactattcct
tacctggagcacatcattcatgtctgggaagaaactggtgcggacttccacaactgtctc
atccagctgtactgtgagaaagtgcagggcttaatgaaagaatatctcagttctttccct
gcagatagagctccagtgcctgctggggaggaaggaggagacttgggggattaccggaag
aagctgctgctttttctggagaagtccagctgctatgaacctagtcgacttatcagtgac
ttcccctttgatggtctcctagaagaacgtgctctgctcttgggtcgaatggggaagcat
gagcaagctctgtttatttatgttcatattttgaaggacaccaacatggctgaaaactac
tgccataaacattatgacagaaacaaagatggcaacaaagatgtgtatctgtccctgctg
cgcatgtatctctccccacccagtgttcattgcctgggacccatcaagatggaggtgctg
gagcctcaagccaatctgcaggctgctctgcaggttttggaactgcaccacagcaaactg
gataccactaaggcaataaacctactcccagcaaatacacagatcagtgagattcgcatc
ttcttagagaaagtacttgaagaaaatgctcagaagaaaagatttaatcaagtgctcaag
aaccttctccatgcagagtttctgagggtccaggaggagcggatcttgcatcagcaagta
aagtgcataattacagaggagaaggtgtgcactgtttgtaaaaagaagataggtaacagt
gcatttgctcgataccctaacgcaatagttgtgcattatttctgctccaaagaagtcaac
acactggacacctga
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