Agelaius tricolor (tricolored blackbird): 139590253
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Entry
139590253 CDS
T10815
Symbol
LRP5
Name
(RefSeq) low-density lipoprotein receptor-related protein 5
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04150
mTOR signaling pathway
atrc04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
139590253 (LRP5)
04150 mTOR signaling pathway
139590253 (LRP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139590253 (LRP5)
Membrane trafficking [BR:
atrc04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
139590253 (LRP5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
EGF_LRP2
SGL
EGF
cEGF
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
139590253
NCBI-ProteinID:
XP_071283734
LinkDB
All DBs
Position
Unknown
AA seq
1617 aa
AA seq
DB search
MEAAAAAPLPLLLLRLLAASVLRCEPGSAGASPFLLFANRRDVRLVDAGGTKLESTVVVS
GLEDAAAVDFQYSQGIVFWTDVSEEAIKQTYINQTGNVVQNVIISGLVSPDGLACDWIGK
KLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDPAHGYMYWTDWGETPRIERAG
MDSSMRKIIVDSDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGSFRQKVVEGSLTHP
FALTLSGDTLYWTDWQTRSIHACNKRTGEKRREILSALYSPMDIQVLSPDRQPYFHTPCE
ENNGGCSHLCLLSPRDPFYSCACPTGVQLEDDGRTCKAGAEEVLLLARRTDLRRISLDMP
DFTDIILQIDNIRHAIAIDYDPVEGYIYWTDDDVRAIRRAYLDGTGAQTLVTTEINHPDG
IAVDWVARNLYWTDTGTDRIEVTRLNGTSRKILISENLDEPRAIVLNPVMGYMYWTDWGE
SPKIECAYLDGSERRVLVNTSLGWPNGLALDLEKNKLYWGDAKTDKIEVINVDGTMRKTL
LEDKLPHIFGFTLLGDYIYWTDWQRRSIERVHKIKASRDIIIDQLPDLMGLKATSVTKAF
GTNSCAENNGGCSHLCFFTPQEARCACPIGLELLSDMKTCIIPEAFLVFTSRAAIHRISL
ETNNNDVAIPLTGVKEASALDFDVSDNRIYWTDVSLKTISRAFMNGSSVEHVIEFGLDYP
EGMAVDWMGKNLYWADTGTNRIEVARLDGQYRQVLVWKDLDNPRSLALDPTKGYMYWTEW
GGKPRIVRAYMDGTNSITLVDKVGRANDLTIDYVDQRLYWTDLDTSMIESSNMLGQEREI
IADDLPHPFGLTQYSDYIYWTDWNLHSIERADKTSGKNRTLIQGHLDFVMDILVFHSSRQ
DGLNDCVQNNGHCGHLCLAIPNGFRCGCAAHYTLDPNSRNCSSPASFLLFSQKSAISRMI
PDDQQSPDIILPMHGLRNVKAIDYDPLDKLIYWVDGRQNIIKRAKDDGTQPFTVMSTPNQ
SQNPEKQPHDLSIDIYSHTLYWTCEATNSVNVHRLSGESIGMVLRGEHDRPRAIVVNAER
GYMYFTNMQERAPKIERAALDGTEREVLFTTGLIRPVALVVDNKLGKLFWVDADLKRIES
CDLSGANRVTLEDSNILQPMGLTVLGNHLYWIDRQQQMIERVEKVNGYKRTRIQGRIAHL
TGIHAVEELDMEEFSVHPCSRDNGGCSHICIAKGDGTPRCSCPEHLVLLQNLLTCGEPPT
CSPDQFTCATGEIDCIPMAWRCDGFPECDDQSDEDSCPICSASQFQCEKGQCIDAHLRCN
GEIDCQDKSDEADCDTICLPNQFRCASGQCILLKQQCDSFPDCIDGSDELMCEKSKPASD
ESQPHSSAIGPVIGIILSLFVMGGMYFVCQRVVCQRYAGPNSPFPHEYVSGTPHVPLNFI
APGSSQHGTFTGISCGKSMISSMSLMGGSSGAPLYDRNHVTGASSSSSSSTKATFYPQIL
NPPPSPATDRSLYNAEMFYSSNIPSNTRSYRPYLIRGIAPPTTPCSTDVCDSDYTTSRWK
ANKYYIDLNSDSDPYPPPPTPRSQYMSAEESCPPSPATERSYFHLYPPPPSPCTDSS
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggcggccgcgccgctcccgctgctgctgctgcggctcctcgccgcctcg
gtgctgcgctgcgagccgggctcggccggggcgtctccctttctgctgtttgccaaccgg
cgggacgtccggctggtggatgccgggggcacgaagctggagtccaccgtggtggtcagc
ggcctagaggatgctgctgccgtcgacttccagtattcacaaggcatcgttttctggaca
gatgtgagtgaagaagccatcaagcaaacttacattaaccaaactgggaatgtggtgcag
aatgtcatcatttctggtctggtttctccggacggcctggcgtgtgattggattgggaaa
aagctttattggacggattcagagaccaataggatagaagtagctaatctcaatggaaca
tctagaaaagtcctcttctggcaagaccttgatcagcccagggcaatagctttggatccg
gctcatggatacatgtactggactgactggggtgagacgccccgaatagagcgggcagga
atggacagcagcatgcgcaagatcattgttgattccgacatttactggccaaacggactc
acgatagatctcgacgagcagaaactttactgggctgatgcaaaactgagtttcattcat
agggcaaatctggatggttcctttaggcaaaaagttgttgagggtagcctcactcacccc
tttgccctgacgctgtctggggacactctgtactggacggactggcagacgcgctccatc
cacgcctgcaacaaacggacgggagagaagaggagggagatcctgtctgccctctactca
cccatggacatccaggtcctgagccccgaccgacagccctactttcacactccatgtgaa
gaaaacaacggtggttgctcccatctgtgcctgctgtctccaagggaccccttctacagc
tgtgcctgtcccactggtgtgcagctggaagatgatggcaggacgtgcaaagcaggtgct
gaggaagtcttgctgctcgccagaagaactgacttgaggaggatttccctggacatgccg
gatttcacggacattattctgcagatagacaacatcagacatgcaattgccattgactat
gaccctgtggaaggctacatctactggactgatgatgatgtccgggcaattcgtcgggcc
tacctcgatggcactggagcccagactctggtgaccacggagatcaaccatccagatggg
attgctgtggactgggtggccaggaacctgtactggactgatactggcacagaccgcatc
gaggtgacgcggctgaatgggacatccaggaagattcttatctcagaaaacctggatgag
cctcgagccatagtgctcaatcctgtaatgggctacatgtattggacagactggggtgaa
agtccaaagatagaatgtgcttatttggatggctcagaaaggcgagttctggtgaatact
tctcttgggtggcctaatggcttggcactggaccttgagaaaaacaagctttattgggga
gatgcaaaaacagataaaattgaggtcataaacgttgacggaacaatgaggaaaaccctc
ttagaagacaagcttccacacatatttgggttcacactgctgggagactacatctactgg
actgactggcagagaagaagcattgaaagagttcacaagataaaggccagcagagacatc
attattgatcagctgccagatttaatgggccttaaggcaacgagtgtcaccaaggccttt
ggaactaattcatgcgcagagaacaatggaggctgcagccatctgtgtttctttacaccc
caggaggccaggtgtgcctgtcccatcggccttgagctgttgagtgacatgaagacttgc
atcattcctgaagccttcttagttttcacaagcagagcagcaattcataggatttccctt
gaaaccaataataatgatgttgctattcctcttactggagtcaaggaagcatctgctctg
gattttgatgtctctgataacagaatctattggactgatgttagtttgaagaccataagc
cgagctttcatgaatgggagctctgttgagcatgtgattgagtttgggctagattatcct
gagggaatggctgtggactggatgggcaagaacctctactgggcagatactggaaccaat
cgcatcgaagtcgcccgcctggacgggcagtacaggcaggtgcttgtgtggaaggacctg
gacaacccaaggtctctggctcttgatcccaccaaaggatacatgtactggactgagtgg
ggaggcaagcccaggatcgtccgagcctacatggatgggacaaacagcatcactttggtg
gacaaagtggggcgtgccaatgacctcactattgattatgtggaccaaaggctctactgg
actgacttagacacaagcatgattgagtcatcaaatatgctgggacaagaacgagaaatc
atagcagatgatctacctcatccatttggattaacccagtacagtgactacatctactgg
acagactggaatcttcacagcatagaaagagcagacaagaccagtgggaagaacaggacc
cttattcagggccatctggattttgtgatggatatattggtcttccattcttctcgtcag
gacggcttaaatgattgtgtgcagaataatggccattgtggtcacttgtgccttgccatc
ccaaatggatttaggtgtggctgtgctgctcattacaccttggatcccaacagcaggaac
tgcagttcccctgccagtttcctgctatttagccagaagtctgccatcagcaggatgata
cctgatgatcagcagagcccagatatcatcctacctatgcatggactgaggaatgtcaag
gctattgattacgatcccttagataaattgatctactgggtggatggacgccagaatatt
ataaaaagagccaaagatgatggtacacagcctttcactgtaatgagtaccccaaaccaa
agccagaacccagagaagcagccccacgacctcagcattgatatctacagccacaccttg
tactggacctgcgaggccacgaattccgtcaacgtgcaccggctgagcggcgaatccatt
gggatggtgctgcggggcgagcacgacaggcccagggccatcgtggtgaacgcggagcgg
gggtacatgtacttcaccaacatgcaggaaagagcccccaagattgagcgtgcagccctg
gatggcacagagagagaagtgcttttcacaactggcttgatccgacctgtcgccctggtg
gttgacaacaagcttggaaagcttttctgggtggatgcagatctgaagcgcattgagagc
tgtgacctgtcaggtgccaaccgtgtgaccctggaggactccaacattcttcagcccatg
ggactcactgtgctggggaatcacctgtattggattgatcgtcagcagcagatgattgag
agagtggagaaagtgaatggctacaaaaggactagaattcaaggcaggattgctcacctg
acaggcattcatgctgtggaagagctggatatggaagaattctctgtgcatccatgctcc
cgtgacaatggtgggtgttcacacatctgcattgccaaaggggatggaactccaagatgt
tcatgccctgagcaccttgtgcttctgcagaatctcttaacatgtggagaacctccaact
tgctccccagaccagtttacctgtgcaactggagagattgactgtatcccgatggcatgg
aggtgtgatgggtttcctgagtgtgatgaccagagtgatgaagacagctgccccatatgc
tctgcatcccagttccagtgtgagaagggacagtgcattgatgcacacttgcggtgtaat
ggagaaatcgactgtcaagataaatctgatgaagcagattgtgatacaatttgtctgccc
aaccagttccgctgtgcgagcgggcagtgcatcctcctgaagcagcagtgcgactccttt
cccgactgcatcgatggctctgacgagctcatgtgtgaaaaatcgaagccagcctcagac
gagtcgcagccacacagcagtgccattggccctgtcattgggataatcctgtccctgttt
gtcatggggggaatgtactttgtgtgccagcgggtggtgtgccagcgctacgccgggccc
aacagccccttcccgcacgagtatgtcagcgggaccccccacgtccctctcaatttcatc
gctccaggaagttctcaacatggcactttcactggcatctcttgtggaaagtccatgatt
agctccatgagtctcatgggaggaagcagtggtgccccattgtacgacagaaaccatgtt
actggagcatcttcaagcagctcatccagcactaaagccactttctatccacagattttg
aaccctccaccttccccagctaccgatcgctccttatacaatgcagagatgttttattcc
tcaaacattccttcaaacacaagatcttacagaccgtacctgatacgagggatagctcca
cccacaaccccgtgcagcacagatgtctgtgacagtgactataccacgagtcgatggaag
gccaacaaatactacatagatttaaattcagactcagatccttacccccctcctcccaca
cctcgcagtcagtacatgtcggcagaagaaagttgccctccatctcctgccacggaacga
agctattttcacctctacccccctccaccctctccttgtacagactcttcatga
DBGET
integrated database retrieval system
