Agelaius tricolor (tricolored blackbird): 139590393
Help
Entry
139590393 CDS
T10815
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
atrc03021
]
139590393 (CTR9)
Transcription machinery [BR:
atrc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
139590393 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
139590393
NCBI-ProteinID:
XP_071284088
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKADEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEEGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERASDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctccgggacaccgacgaggttattgagcttgac
ttcgatcagttgcccgagggtgatgaagttataagtatactgaaacaggagcacacccag
ctgcacatatggatcgccctagcgctggagtactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaag
gaccagatgacatgcctggacaccctggcagcctactatgtacagcaggctcggaaggag
aagaacaaagacaacaagaaggagctcatcacccaggccaccctgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccactttgtgctcaaccagtctcca
aataatatccctgccctactcggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagccgaggtt
cggttgggaatgggtcactgcttcgtgaagctgaacaagctggaaaaagctcgcctggcc
ttcagcagggctctggagctcaactccaagtgtgtcggggccttggttggactggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactgctctctagg
gcttacacaattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtacaacacttggctcttcatgctttccataacacagaa
gtggaagccatgcaggcagagagctgttaccagctggcaaggtcttttcatgtacaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcgtcttctttt
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctaccctaacaattatgaaactatgaaaatc
cttggatctctttatgcagcttcagaagaccaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctggaacagactgatatacagggtgctctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtccctccagagatcctgaataatgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcctggcgtcgctggatcgt
gcgaaagcagaagctgagcacgatgagcattactacaacgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcatgaagctgaaaagctctat
aaaaacattttgagagaacatccaaattatgttgattgctacttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagcacttcagatc
aatcaggatcatccagatgcctggtctctgattggcaatcttcacttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acatattccatgctggctcttggcaacgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaagcgtcaccaagaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaatttgtatgctgccaatggcataggagctgtcttggcacacaag
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacacatctacgtggagcagaagcagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtcttg
ttatatttggcccgggcactgtttaaatgtggcaaattacaggaatgcaaacaaaccttg
ttaaaggccaggcatgtggctccaagtgatacagtcctcatgtttaatgtcgctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtcctt
aatgctgtgaaagagctggagctcgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctctgactta
ctgagccaggcccagtatcatgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaaacttctggaacaaagagctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaaaaaaggagcaggggagtttgatgag
tttgtcaatgatgacagtgatgaagatctgcccatctctagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagatgaggggagtgatgatgaggaacacgaaaacggcccgcgg
cctaagaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagagcgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacgctagaaatagcaacagtgat
tctgaggagggcgagcagcagcacagcaaacgcattgtttccgacagcgattccgataac
aggaacaagtcgggcagcgaggccggcagcccccgcaggtccagcgcccgcgcctctgag
gaggagtctgacagcgaccggtccccgaggaagaggcggcgctcggagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgaatcg
cggccggcttcgcgcagcgccgagtccgacagggactccgagagggcctctgaccacgag
gggtctgccagagcttctggcaacgagtccgagccagaggcatccaatgatgagggctct
gaagggggctcggatgacagcgattag
DBGET
integrated database retrieval system
