Agelaius tricolor (tricolored blackbird): 139590607
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Entry
139590607 CDS
T10815
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
atrc Agelaius tricolor (tricolored blackbird)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
Ank_4
SAM_2
Ank_3
Ank_5
SH3_2
PDZ_6
SH3_9
PDZ
FERM_f0
SH3_1
SAM_CEP-1_C
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
139590607
NCBI-ProteinID:
XP_071284443
LinkDB
All DBs
Position
Unknown
AA seq
1849 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSVESESDSSKEETIYDTIRATAEKPSSRMDDSQSNTLVIRI
IIPDLQQTKCIRFNPEASVWVAKQRILCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERL
LREYPQPVNKGVPSLEFRYKKRVYRQFNLDEKQLAKLHTKANLKKFMDHVHHLSVEKMTK
MLDRGLDPNYHDLESGETPLTLAAQLDNTVEVIKALKNGGAHLDFRAKDGMTALHKAARA
KNQVALKTLLELGASPNYKDSCGLTPLYHTAVVGGDPFCCELLLHEHATVSCKDENGWQE
IHQACRYGHVQHLEHLLFYGADMCAQNASGNTALHICALYNQESCARVLLFRGANKEIKN
YNSQSPFQVAIIAGNFELAEYIKNHREADIGPSFPYPSRSPWNPLLSVPFREAPTYSNRR
RRPPSTLAAPRILLRSNSDNNLNINNLPEWSASSSASSHRSLSPHLLQQMQNNPNGTVKT
VGSYTPSSRSRSPSLNRLGEDAKRQQHRHISAVYSPSANKDTLSALDYQGPKRKLYSAVP
GRLFIVVKPYQPQGEGEIHLHKGDRVKVLSIGEGGFWEGSTRGHIGWFPAECVEEVQCKP
NESKPETRADRTKKLFRHYTVGSYDSFDASSDCIIEEKAVVLQKKDNEGFGFVLRGAKAD
TPIEEFTPTPAFPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQ
GGNHLVLKVVTVTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELASVRKKKD
KVDEIVPVSKPSRIADNATVDSRVATIKQRPSSRCFPSDMNSMYERQGIAVMTPTVPGSP
QGPFLGIPRGTMRRQKSIGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSLPPSPP
PPSPSLYNSPKSLTSRSYGTIKPPFNQNSGAKISLVRPESVGTMIRDKGIYYRRELDRYS
LDSEDLYNRSAAAQANFRSKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVE
DSPEKTCSIPIPTIIVKEPSTSSSGKSSQGSSMEIDPQSSEQPGQLRPDDSLGVSSPFAA
AIAGAVRDREKRLEARRNSPAFLSTDLGDEDVGLTPPTPRMRQSKFTEEAMFSGEDGFRQ
LMSPSPIPTPREPPENLFNSSEPSSQSDSRTLNAPSKTKGTDNSMVAAKPTSAPGSDSYV
HPVTGKLLDPNSPLALALSARDRAMKEQTQQIPGKGDAVKTDLNKPLYIDTKLRPNMETT
FPVTATVTRQNTRGLLRRQETENKYEMDAGKEKKAEEKKNMLINIVDTSQQKSAGLLMVH
TVDTAKSDDMPEDEEEKGAEMEPSPENSPPERPEGSEEAESELSVPAAPEPPASPCKTIV
AASSVDDPVILPFRIPPPPLASVDIDEEFLFTEPLPPPLEFANSFDIPDDRAVPGSALTD
LVAQRKNGTPSPSQPANSLDGKKQVGLSNCLPASFLPPPDSFDNVADSGIEEVDSRSSSD
HHLETTSTISTVSSISTLSSEGGENVDTCTVYADGQTFLVDKPPVPPKPKMKPIINKSNA
LYKDALIEETVDSFVIPPPAPPPPPISAQPNLVKAVPQRTSKLWGDVPEVKSPILSGPKA
NVISELNSILQQMNREKSSKPGEGLESPTGTKTASLSTRSTEVMSTVSGTRSTTITFTVR
PGASQPISLQSRSPDYDSRTSGARHAPSPVVSPTEINKDILPAPLTASASASSPSPTLSD
VFSLPSQPPSGDLFGLTTGRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNL
GEHKETFMDNEIDGTHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtagccctacatcaagtgaagatgaaatggcacaaagcttctctgactattct
gttgagtctgaatcagacagctccaaagaagaaactatttatgacacaattagagcaact
gcagaaaagccaagcagcagaatggatgacagtcagagcaacactttagtgattcgaatt
atcatacctgacttgcagcaaacgaaatgcattcgatttaacccagaagcttcagtgtgg
gttgcaaagcagcggattttgtgcactttgaaccagagtttgaaggatgtcctgaactat
ggattgttccagcctgcaagcaatgggagagatgggaagtttttggatgaggagagactt
ctgagggaatacccccagccagtcaataaaggagttccttcacttgagtttcgctacaag
aaaagagtgtacagacagttcaacctggatgaaaagcagctggccaagcttcacaccaag
gccaatttgaaaaagtttatggatcatgtccaccatctctctgtggaaaaaatgaccaag
atgttggaccgaggactggacccaaactatcatgacttagaaagtggagaaacaccccta
actttggcagctcagcttgacaacacagtagaagtgataaaagccctgaaaaatggagga
gcacatttagacttcagagccaaagatggaatgacagctctgcacaaagcagccagagcc
aagaaccaagtagccctcaagacccttttagagctgggagcatctcccaactacaaggac
agctgcggcctgaccccgctgtaccacacagccgtggtgggaggggaccctttctgctgt
gagctcttactccatgaacatgctacagtcagctgcaaggatgaaaatggatggcaagaa
atccatcaggcttgcaggtacggacacgtccaacacctggagcacctcctgttctacggc
gctgacatgtgcgcgcagaacgcctcggggaacacggccctgcacatctgtgccctctac
aaccaggagagctgtgcaagggtgctgctgttccggggagccaacaaggagatcaagaat
tacaacagccagtctccatttcaggtggctataatagcgggaaattttgagcttgctgaa
tacatcaagaatcacagggaagctgatattggacccagcttcccatatccaagtagaagt
ccctggaatccattgctgtcagtgccctttagggaggctcccacctactccaacaggagg
aggaggcctcccagcaccttggcagccccccggatcctgctccgctccaacagcgacaac
aacctgaacatcaacaacctccccgagtggtcagcctcctcctctgcctcttcacaccgc
agcctttcccctcacctgctccaacagatgcagaataatcccaatggaactgtaaaaact
gtggggagttacactccgtcctcccggagccgctcgccatccctcaacaggctgggagag
gatgccaagaggcagcagcacaggcacatcagtgccgtttacagtcccagtgccaacaaa
gatactctgtctgccttggattatcagggtcccaaaaggaagctctacagtgctgtccct
gggagactttttattgttgtaaagccatatcaacctcaaggggaaggggaaattcacctg
cacaaaggagatagagtcaaagtgctgagcatcggagaaggtggattctgggaaggcagc
acccggggacatatcggctggtttcctgcagagtgtgtggaagaagttcagtgcaaaccg
aatgaaagcaaaccagaaacacgagcagatagaacaaagaagctgtttagacactacact
gttggatcctatgacagctttgatgcttcaagtgactgcataatagaagaaaaggcagtg
gtcctgcagaaaaaagacaatgaaggatttggatttgtgctcagaggggcaaaagctgac
acaccaattgaagaattcaccccaactccagcctttcctgctttgcagtacttggaatct
gtggatgaagggggagtagcatggcaagctggcctgagaactggagactttttgatcgag
gttaataatgagaatgtagtgaaagttggccacaggcaggtggtgaacatgattcgacag
gggggcaatcacctcgtgctgaaggttgtcacagtaaccaggaatcttgatccagatgac
acagcaaggaagaaagccccaccacctcctaagcgagctccaaccactgcactgaccctg
cgctctaagtccatgacctcagagcttgaagagcttgcttcagtacggaagaagaaggat
aaggtggatgaaatagtgccagtttccaagccatcaagaattgcagacaatgcaactgtg
gactccagagtggcaactataaaacagcggccttctagtagatgttttccttcagatatg
aattccatgtatgagagacagggtattgctgtgatgacacccactgtcccagggagccct
caaggtccttttctgggtatacctcggggtacaatgagaagacaaaaatctataggaata
acagaggaagagcggcagtttctggcccctcctatgctgaagtttaccagaagtctttca
atgcctgacacctctgaagatatcccaccaccaccacagtccttacctccctcaccaccg
ccaccttccccctctctgtacaactcccccaaatccctgacctcccggagctacggaacg
atcaaacctccatttaaccagaattcaggtgcaaaaatctctttggttcggcccgagagc
gtggggacgatgatcagggacaaagggatctattaccggcgggagctggaccggtactcc
ctggactcggaagacctgtacaaccggagtgccgcagctcaggccaatttcaggagcaag
aggggccagatgccagaaaacccctattccgaggtcgggaagatcgccagcaaagccgtt
tacgtgccggccaagccagccaggaggaaggggatgctggtgaaacagtccaatgtggag
gacagtccagaaaagacctgctctattccaatcccaaccatcatcgtcaaagagccatcc
accagcagcagcgggaaaagcagccaagggagcagcatggagatcgatcctcagtcttcg
gagcagcccggacagcttcggcctgacgacagcctgggagtcagcagcccgttcgcagca
gccatcgcaggggccgtgagggacagggaaaagaggctggaggcgaggcgcaattccccg
gccttcctctccacagacctgggagacgaggacgttggattgaccccaccgacaccacgg
atgaggcagtccaagttcaccgaggaggcgatgttcagcggcgaggatggtttcagacag
ctcatgtcgccatctccgatccccacccccagggagccccccgaaaacctttttaacagc
agcgagcccagcagccagagcgactcaaggacattgaacgctccgtccaaaacgaaaggc
actgacaacagtatggtggcagccaagcccacgagtgctcccggctcggatagctatgtc
cacccggtcacagggaagctgctggatccaaactccccacttgccctcgcgctctctgcc
agggacagagccatgaaagagcagacgcagcagattccaggcaaaggggacgcagtcaaa
accgaccttaacaaaccgctttacatcgacaccaagctgagacccaacatggaaacgact
tttcctgttactgccactgtcaccaggcaaaatacccgcggcctgttgagacggcaggag
actgagaacaagtacgagatggatgcagggaaagaaaagaaagctgaggagaagaagaac
atgttgataaacatcgtggatacctcgcagcaaaaatcagctggcttgttgatggtgcac
acagtggatacggcgaagtcagatgatatgcccgaggatgaggaggaaaagggagctgag
atggagccgagccctgagaactccccgccagagaggccagagggcagcgaggaagcggag
agcgagctgagcgtccctgctgcacccgagcccccagcttctccctgcaaaaccatcgtg
gccgccagctctgtggacgaccctgtcatcctgcctttccgcatccccccgccgcccctg
gcctcagtggacatcgacgaggagttcctgttcactgagccgctgccccctcccttggag
tttgccaacagcttcgacatccccgacgaccgcgcggtgcccggctcggcgctgacagac
ctggtggcgcagaggaagaacggcaccccttctcccagccagccagcaaactccttggac
ggcaaaaagcaagtgggtctctcaaactgtttgcctgcatccttcctgccaccccccgac
agcttcgacaacgtcgccgactctgggatcgaggaggttgacagtcggagcagcagtgac
catcacctagagacaaccagcactatctcaacggtgtccagcatctctaccttatcctcg
gaagggggggagaacgtggatacttgtacagtctatgcagatgggcaaacatttctggtg
gacaaacccccagtacctcctaagccaaaaatgaagcccataatcaacaaaagcaatgca
ctttacaaggacgcgctgatcgaggaaactgtagacagctttgtgatccctcctcccgct
ccgcccccgcctcccatcagtgcccagcccaacctggtgaaagctgtcccccaaaggaca
tccaagctttggggggacgtgccagaggtgaaaagcccgattctctcaggccccaaggct
aatgtcattagtgaattgaactcaatactccagcaaatgaacagagagaaatcctcaaag
ccaggggagggattggagtcgccaactggaacgaaaactgcgagtctcagtacaaggagc
acggaagtcatgagtactgtctcaggtacacgaagtacaacaatcactttcactgtccga
cccggagccagccagccgatctcactgcagagcaggtccccagactatgacagcaggacc
tcaggagcaaggcacgctcccagccctgtggtttcaccaacagagattaataaagacatc
ctgcctgctcctctgactgcttctgcttcagcctcatctccttctccaactctgtccgat
gtatttagcctacccagccagcccccttctggggacttatttggcttgaccacagggcgc
agcaggtctccttctccctccatattacaacagccaatctcaaataagccttttacaact
aagcctgtccacctgtggactaaaccagatgtggcagattggttggaaagtctaaactta
ggtgaacataaagaaacatttatggacaatgaaatagatggcacacatttaccaaatcta
cagaaggaagatctgatagaccttggagtgactagagttgggcacagaatgaacatagaa
agagctttgaagcagctgctggacagataa
DBGET
integrated database retrieval system
