Agelaius tricolor (tricolored blackbird): 139590815
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Entry
139590815 CDS
T10815
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc04340
Hedgehog signaling pathway
Brite
Peptidases and inhibitors [BR:
atrc01002
]
Cysteine peptidases
Family C46: hedgehog family
139590815 (SHH)
Glycosaminoglycan binding proteins [BR:
atrc00536
]
Heparan sulfate / Heparin
Morphogens
139590815 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
139590815
NCBI-ProteinID:
XP_071284690
LinkDB
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Position
Unknown
AA seq
426 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEKGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRHPRARLLLTAAHLLFVAPQQNQSEAGSAGSGRALFASRV
RPGQRVFVLGEGGRRLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHS
WAHWAFAPFRLLQALLAALCPAGVGCPMGDPTAPGIHWYSRLLYRIGSWVLDSDSLHPLG
MMVSSS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgcgggtaaccgagggctgggacgaggacgggcaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacgtcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcagccaaatctggtggt
tgcttccctggctcggccacggtgcacctggagaaaggtgggaccaagctggtgaaggac
ctgaggcctggagacagggtgctggtggccgacaccgaaggccggctgctctacagcgac
ttcctcaccttcctggaccgcgaggacggctcccacaagctcttctacgtcatcgagacc
cggcatccccgggcccggctgctgctgacggccgcccacctcctcttcgtggccccccag
cagaaccagtccgaggcggggagcgccggcagcgggcgggcgctgttcgccagccgcgtg
cggccgggccagcgcgtcttcgtgctgggcgagggcgggcggcggctgctgccggcggcc
gtgcaccgcgtgtcgctgcgggaggaggcgtcgggagcctacgcgccgctcaccgcccag
ggcaccatcctcatcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagc
tgggcgcactgggccttcgctcccttccgcctgctgcaggccctgctggccgccctctgt
cccgccggggtggggtgccccatgggagaccccacggcccccggcatccactggtactct
cggctcctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggc
atgatggtgtcgtccagctga
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