Agelaius tricolor (tricolored blackbird): 139590854
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Entry
139590854 CDS
T10815
Symbol
ITGB1
Name
(RefSeq) integrin beta-1
KO
K05719
integrin beta 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03271
Virion - Rotavirus
atrc04145
Phagosome
atrc04510
Focal adhesion
atrc04512
ECM-receptor interaction
atrc04514
Cell adhesion molecule (CAM) interaction
atrc04517
IgSF CAM signaling
atrc04518
Integrin signaling
atrc04530
Tight junction
atrc04810
Regulation of actin cytoskeleton
atrc04820
Cytoskeleton in muscle cells
atrc05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
139590854 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139590854 (ITGB1)
04514 Cell adhesion molecule (CAM) interaction
139590854 (ITGB1)
04517 IgSF CAM signaling
139590854 (ITGB1)
04518 Integrin signaling
139590854 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
139590854 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
139590854 (ITGB1)
04530 Tight junction
139590854 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
139590854 (ITGB1)
04810 Regulation of actin cytoskeleton
139590854 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
139590854 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
atrc04131
]
139590854 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atrc04147
]
139590854 (ITGB1)
04515 Cell adhesion molecules [BR:
atrc04515
]
139590854 (ITGB1)
04090 CD molecules [BR:
atrc04090
]
139590854 (ITGB1)
Membrane trafficking [BR:
atrc04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
139590854 (ITGB1)
Exosome [BR:
atrc04147
]
Exosomal proteins
Proteins found in most exosomes
139590854 (ITGB1)
Cell adhesion molecules [BR:
atrc04515
]
Integrins
Integrin beta subunits
139590854 (ITGB1)
CD molecules [BR:
atrc04090
]
Proteins
139590854 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
139590854
NCBI-ProteinID:
XP_071284791
LinkDB
All DBs
Position
Unknown
AA seq
803 aa
AA seq
DB search
MAKTNFRWLTCAGVLCCLIWNGFAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTDFLQE
GEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAITQIQP
QKLSLHLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKI
TSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELV
GKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP
NDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSA
VGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCS
NISIGDEVRFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSP
ACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQ
CVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLD
TTPCMASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKG
EKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANV
HVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTGENPIYKSAVTTVVNPKYEGK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggccaagactaatttcagatggctcacatgtgctggcgtcctctgttgcttgatatgg
aatggatttgcccagcaaggtggaagcgactgcataaaagcaaatgcaaagtcatgtggg
gaatgtatacaagcaggaccaaactgtggctggtgtaaaaaaacagactttttgcaagaa
ggagagccaacatctgcccggtgtgatgacttggcagcactgaagagtaaaggctgcccc
atggaagatatagagaatcccagaggcagcaaacaggtgctcgaaaatagagaagtaaca
aatcgtaagaaaggtgctgcagagaagctgaaaccagaagccattacacagatccagcca
cagaaattatcactgcatctaagagttggggaaccccagacattttcattaaaattcaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtgaagagtctcggaacagctctgatgttagagatggaaaaaata
acttcagactttcggattggctttggctcttttgtggagaaaactgtgatgccttatata
agtacaacaccagccaaactcagaaatccttgtacaggggaccaaaactgtacaagtcca
tttagctataaaaatgtgctcagccttaccagtgaaggaaacaagttcaacgaacttgta
ggtaaacagcatatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggctggaggaatgttacaagactattggtgttt
tccacggatgctggattccactttgcaggagacggtaaacttggtggaattgttctgcca
aatgatgggaaatgtcatctggaaaataatgtgtacacaatgagccactattacgattat
ccctctattgctcatctggtacagaaacttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggcagtctataaggaactgaaaaatctgatacccaaatcagca
gtgggaacattgtcttcaaattccagtaatgtgattcagctgatcattgatgcatacaat
tccctttcttcagaggtcatcctggaaaatactaagctaccaaaaggagtgacaatcagt
tacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaagtgttct
aacatttctattggagatgaggttagatttgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaaccactgggattcactgaagaagttgaa
attaatctccagttcatctgtgagtgtcagtgtcagagtgaaggagaacctaatagtcca
gcctgccatgcaggaaatggaacatttgaatgcggtgcgtgcagatgtaatgaaggacgt
attggaagactatgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgcatttgtggacaa
tgtgtgtgcaagaaaagggagaacaccaatgaagtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcggtcaaatggtttaatctgtggaggaaacgggatctgcaag
tgcagagtgtgcgagtgcttccccaacttcactggcagtgcctgcgattgttccttggat
actacaccatgtatggcatcaaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacctgtgaaatgtgtcagact
tgccttggtgtctgtgcagagcacaaggactgtgttcagtgcagagctttcgataagggc
gagaagaaggagacgtgttcccaggagtgcatgcacttcaacatgacgcgcgtggagagc
cgcgacaagctgccgcagccgggccagcccgaccccctgtcccactgcaaagagaaggat
gtggatgactgctggttctacttcacttactctgtcaactccaatggtgaagccaatgtc
cacgtggtggagaccccagagtgccccagtggtcctgacatcattcccattgtagctggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgggtgaaaatcctatttacaagagtgcagtgacgactgtggtcaatcctaaatat
gagggaaaatga
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integrated database retrieval system
