Agelaius tricolor (tricolored blackbird): 139590860
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Entry
139590860 CDS
T10815
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atrc03000
]
139590860 (ZEB1)
Transcription factors [BR:
atrc03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
139590860 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
Homeodomain
zf-met
zf-C2H2_15
Zf-C2H2_ZNF451_C
zf-C2HE
zf-C2H2_6
Zn_SUZ12
Motif
Other DBs
NCBI-GeneID:
139590860
NCBI-ProteinID:
XP_071284809
LinkDB
All DBs
Position
Unknown
AA seq
1112 aa
AA seq
DB search
MADGPRCKRRKQPNPRRNNVTNYNNVVEANSDSDDEDKLHIVEEESVTDAADCDASVPED
DLPTDHIVLPENSEREASTNTCWEDEAGKERKEILGPEAQTDEIGCTVKEDECDSDAENE
QNHDPNVEEFLKQEDTAVIYPEAPEEDQRQGTPEASGQDENGTPDAFSQLLTCPYCDRGY
KRFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYKTQLDRHMTSHKSGRDPRHVTQSSGNRK
FKCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVN
GRARSGLKMSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPLNQIKTEPVDYEFKPIV
VASGINCSNPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVA
VDGNVIRQVLENNHANLVSKEQETINNASIQQAGHSLISAISLPLVDQDGTTKIIINYSL
EQPSQLQVVPQNLKKENSVPANTCKNEKLPQDLTVKSEKDKNFEGETNDSTCLLCDDCPG
DLNALQELKHYETKSPPQLPQPSGAEAEKPESPVPSETGENNLSPGQPPLKNLLSLLKAY
YALNAQPSAEELSKIADSVNLPLDVVKKWFEKMQAGQISVQSSGPSSPEQVKLSSPADND
DQAATSNVSEPQNSTNNSQNPGSTTKSQTLPGASTLNGSHSSTPSASPLNLSSSRNSQGY
TYTAEGVQEEPQIEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLTCAKKEPQK
DSSVTDSDPIVNVIPPSANPINIAIPTVTAQLPTIVAIADQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVHETPSKQIQANGNQDERQDTSSEGISNLEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICTKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREPEERDSAEPEELGPEALSSEHAVPRASPSQ
IDSDERESLTREEEEYSEKEEEEEEEKDIEGLQEEKECRELQEVGDAEEVAAVEEEEGKT
EGDKNDEAVNQASNAEPEVIQNNGQVSEENNE
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcaggaagcagccgaacccgcgccgcaacaacgtc
accaattataacaatgtggtagaagcaaactcagactcagatgatgaagataaattgcat
atagtggaagaggaaagtgtaacagatgcagcagactgtgatgctagtgtgccagaagat
gatttgccaacggaccatatagtgttaccagaaaacagtgaaagagaagcgagtacaaac
acttgttgggaagatgaagctggaaaagaaagaaaggaaatcctggggcctgaagctcag
acagatgaaattggatgtacagtaaaagaagatgaatgtgattctgatgcagagaatgag
caaaaccatgaccctaatgttgaagaattccttaaacaagaagatacagctgttatctac
cctgaagcacctgaggaggaccagagacaaggcacaccagaagccagtggtcaggatgaa
aatggaactcctgatgcgttttcccagctgctcacgtgcccgtactgcgaccgggggtac
aagcgcttcacctctctgaaggaacacatcaaataccgccatgaaaagaacgaggataac
ttcagctgctccttgtgcagctacacgtttgcgtacaaaacgcagcttgaccgccacatg
acatcacacaaatcaggaagagacccaagacatgtgacgcagtccagcggtaatcgaaaa
ttcaagtgcactgaatgtggaaaagcttttaaatataaacaccacctaaaggagcaccta
cgaatccacagtggagagaagccatatgagtgcccaaactgcaagaaacgtttttcccat
tctggttcatacagttcacacataagcagtaagaagtgtattggtttgatgcccgtgaat
ggtcgagcccggtcagggctcaagatgtctcagtgctcctccccttccctttctgcatca
ccaggtagcccagcaagaccacagatacgacaaaagatagaaaataaacccttgcaagag
cagcttcctcttaaccaaattaaaactgaacctgtggattatgaattcaagcccatagtg
gttgcttcaggaattaattgttcaaaccctttgcaaaatggggtttttagtggtggtagc
ccattgcaggcaaccagttctcctcagggtgtggtgcaagctgttgttctaccaacagta
ggtctggtgtctcccataagcatcaatttaagtgacattcaaaatgtactaaaagtggca
gtggatggtaatgtaataaggcaagtactggaaaacaatcatgctaatcttgtgtccaaa
gaacaagaaacaatcaacaatgcatctattcaacaagctggccattccctcatttcagct
atcagtcttcctttggttgaccaagatgggacaaccaaaattatcatcaactacagcttg
gagcagccaagtcaacttcaggttgttccacaaaatctaaaaaaagaaaactctgttcct
gcaaatacttgcaaaaatgagaaattaccacaagatctcacagtgaagtctgagaaagat
aagaactttgaaggagagaccaacgatagcacttgtcttctttgtgatgactgcccagga
gatcttaatgcacttcaagaattaaagcactatgaaacaaaaagccctcctcagcttccc
cagcccagtggagcagaagctgagaaacctgagtcccctgtcccatcagaaaccggggag
aacaacttgtctcctggtcagccacctttaaagaaccttctctcactcctaaaagcgtat
tatgcattaaatgctcaaccaagtgcagaagagctttcaaaaatagcagattctgtaaac
ctaccactggatgtggtaaaaaagtggtttgaaaaaatgcaagctggacagatttctgtg
cagtcttctggaccatcttctcctgaacaagttaaattaagcagccccgcagacaacgat
gatcaagcagcaacttcaaatgtgagcgaaccccagaacagcacaaataactcacaaaat
cctggcagtacaacgaaatctcagactttaccaggggcttcaactctgaatggttcacac
agtagcacgccatctgcatcaccactaaacctttcttcatcaagaaattcacagggttac
acgtacacggcagagggtgtacaagaagagccacaaatagaacctcttgacctttcgcta
ccaaagcaacatggagaactgttggaaagatctaccataactagtgtttaccagaacagt
gtttattctgtccaagaagaacctttgaacttaacttgtgcaaaaaaagaaccacaaaag
gacagcagtgttacagactctgatcctattgtaaatgtaatcccaccaagtgccaatccc
ataaatattgctatacctacagtcactgcccagttacctacaattgttgccattgctgac
cagaacagtgttccctgcttgagagctctcgctgccaataagcaaaccattttgattcca
caggtggcttatacatactctactacagttagtcctgcagttcatgagacaccatcaaaa
cagatccaagccaatggaaatcaggatgaaaggcaagacactagctcagaaggaatatcc
aatctagaagatcaaaatgattctgattcaacacccccaaagaaaaaaatgagaaagaca
gaaaatgggatgtatgcatgtgatttatgtgacaaaatattccagaagagcagctcgtta
ttgagacataagtatgaacacacaggtaaaagacctcacgagtgtggaatctgtacgaaa
gcatttaaacacaaacaccatttgatcgaacacatgcgactgcattctggggaaaagccc
taccaatgtgacaagtgtggaaagaggttttcccactcgggctcttactctcagcacatg
aaccatcgctactcctactgcaaaagggagcccgaggagcgcgacagtgccgagcccgag
gagctgggccccgaggcgctgagcagcgagcacgccgtgcccagggcgtccccctcgcag
atcgactcggatgagagggagagcctaaccagggaggaggaggagtacagtgaaaaagag
gaagaggaggaggaagaaaaagacatagagggacttcaggaagaaaaagaatgtagggaa
ctacaagaagtaggggatgcggaagaagtagcagcagtagaagaggaagaagggaaaact
gaaggtgacaagaatgatgaagctgtaaatcaagcaagcaatgcagaaccagaagttata
caaaataatgggcaggtgtcagaagaaaataatgaataa
DBGET
integrated database retrieval system
