Agelaius tricolor (tricolored blackbird): 139591038
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Entry
139591038 CDS
T10815
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
139591038 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
atrc04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
139591038 (SNX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
BLOC1_2
DUF6395
Motif
Other DBs
NCBI-GeneID:
139591038
NCBI-ProteinID:
XP_071285229
LinkDB
All DBs
Position
Unknown
AA seq
968 aa
AA seq
DB search
MLTETSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGNQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
SSINLSLDDLSNVPTDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRN
ANSEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
IPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAESVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFHKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctttccatatggggatggggaagtcttggccttgtgcttttt
ctagtaacttttggacccttcgctatattttactttgcattttatatcctctgctttgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaattcagaaaaataccttgag
cagtgtgaacattcatttctcccttgtacatcggttgggatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgacaggtgcaaatataatt
gatgagcctttacaacaggtaatccagttttccctgagagactatgtgcagtattggtat
tacacactaagtgatgatgaatcctttcttctggaaattaggcaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttatttcactacacga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaaaggatagca
gagaaaggcaatcagatgaaagatcaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttctt
ccgttaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggcgagttggaagctgtgaaagataaagcaagtgaagaattgcaatatcttcgatctcta
gatacagcaggagatgatatcaacaccataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcagaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacagttttttatggattacatgcagcaaactggtggccaagcacatctg
tttttctggatgacagtggaaggatacagggttacagcacagcaacaactggaggtactt
caaagtcggcagaaagatggaaaacatcagactaatcagaccaagggtctattaagagca
gctgcatttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaacttgcagaaacactgaaccatgaggatccaacacccgaa
atctttgatgacattcagagaaaggtgtatgagttgatgctgcgagatgagaggttctac
ccttcgttcaagcagaacgtgttgtatgtgcgtatgttagctgagctggacatgctgaag
gatcccagtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctact
agcagcataaatctgtccttagatgacctttcaaatgtccccactgatgagaccgttcag
ctccatgcatacatctcagatactgtctatgctgactctgacccatatgctgtggcagga
gtgtgcaatgaccacggcaagacgtacgccctgtacgccatcaccgtccaccggcgaaat
gccaacagtgaggagatgtggaagacataccggcgctacagcgacttccatgacttccac
atgaggatcactgagcagtttgaaaaccttgcaaatatactaaaacttcctggcaaaaaa
acatttaacaatatggacagagagtttttggaaaagaggaaaaaagatttaaatgcttat
ttgcagctcttgttaaatcctgaaatgatgaaagcttctccagctttagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggagattttgcacggaagatg
gacacgtttgtaaatccactgcgtaactctatgagaaacgtatcaaatgcagtcaagtct
atccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgccacctctgatgcagaaa
acctattcagatcctgaccattgccgtgttgcagcaccaattgatgacaacgtggatgac
aatattccgctgagagtaatgctcctgcttatggatgaagtctttgatttaaaagagaga
aatcaatggttaagaagaaatataaaaaatctgcttcagcaacttattagagcaacatat
ggtgacacaattaatagaaaaatagttgatcacgttgattggatgacatctcccgagcaa
gtagcagatgcagtgaaacgcttcagagacgctttttggcccaacggtattttagcagaa
agtgttccacgaagggacaaagctattagaatgagaacaagagtggcagggaaaaccaaa
ttgctggaggtaatgccagatgaactgaagcacatcataggtgctgagactacacggaag
ggcattcttcgggtcttcgaaatgttccagcatagtcagctgaataagagaatggtgtat
gtgtttctggagagattcctagaaaccttatttccacaaaataagttccctgagctgttc
cacaaactgcattcaaggtcaaagcaaatgcagagatataagcagagactacactctact
caagcgccttccttacagaaaaggtga
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