Agelaius tricolor (tricolored blackbird): 139591039
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Entry
139591039 CDS
T10815
Symbol
HDAC9
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K11409
histone deacetylase 9 [EC:
3.5.1.98
]
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
atrc03036
]
139591039 (HDAC9)
Enzymes [BR:
atrc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
139591039 (HDAC9)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
139591039 (HDAC9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
139591039
NCBI-ProteinID:
XP_071285233
LinkDB
All DBs
Position
Unknown
AA seq
1115 aa
AA seq
DB search
MLQTIYESESCFSSDGVSGREQLLAQQRMHSMISSVDVKSEVPVGLEPISPLDLRTDLRM
MVPMVDPIMREKQLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKLQQE
LLAIKQQQELLEKEQKLEQQRQEQELERHRREQQLPPLRGKERGRERAVASTEVKQKLQE
FLLSKSATKDSPANGKNHSMSRHPKLWYTAAHHTSLDQSSPPLSGASPPYKYTLPGAQDA
KDDFPLRKTASEPNLKVRSRLKQKVTERRSSPLLRRKDGNVSSFKKRLFEVTESSVSSSS
PGSGPSSPSNGPTSSATENETSVLPSNIQAEHLVSQQRLLIQDESVNLLSLYTSPSLPNI
TLGLPAIQPQISGVRECSRKSISFPLLQASSSFKEKQKGETPPLRQGVALAGQYGGNIPP
SSTHPHIAMEGKPNSSHQALLQHLLLKEQMRQQKLLVTGAVPLHPQSPLAAKERVSPGIR
AAHKLPRHRPLNRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKMLSKSIEQL
KQPGSHLEEAEEELHGDHSMQEERAPASSASVRAESSSAGVDDRIGQQVGAVKVKEEPLD
SDEDVQTQQMESGEQAAFMQQEFLAHQHVHQLQIYQAQMATVGMAGSDKHRPLSRTPSSP
TDSTLPHPDMDQPSQHVYTTGVVYDSLMLKHQCMCGNYANHPEHAGRIQSIWSRLQETGL
LNKCERIRGRKASLEEIQLVHSEHHSLLYGTSPLNRQKLDPRKLLGNVSQKLFSLLPCGG
LGVDSDTVWNELHSAGAARMAVGCVIELAARVASRELKNGFAVVRPPGHHAEESTAMGFC
FFNSIAITAKYLRDKLNIGKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPG
SGAPNEVGSGPGEGYNINIAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGF
DAVEGHDPPLGGYKVTAKCFGHLTKQLLKLADGRVVLALEGGHDLTAICDASEACINALL
GNELEPLPEDIVHQIPNMNAIASLKKTTEIQSKYWKSVEPYSVPVDCALAESQKQEREET
ETVSAMASLSVDVEQCIPQEGSRAAGEPMEEEPAL
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagacaatttacgagagtgaatcgtgtttttcctcagatggggtttctggacgt
gaacagctcttggctcagcaaagaatgcacagtatgatcagctcagtggatgtgaagtca
gaggttcccgtggggctggagccgatctctccgttagacttgcggacggatctcaggatg
atggttcccatggtggacccgattatgcgcgaaaagcagctacagcaggagctgctcctg
atccagcagcagcagcagattcagaaacagctgctcattgcagagttccagaagcagcat
gaaaacctgacccgccagcatcaggcccagctccaggagcacattaagttacaacaggaa
ctactagccattaaacaacagcaagaactccttgaaaaagagcagaaactggagcagcag
agacaagagcaggaactggagaggcatcgcagggagcaacagcttcctcccctccgaggc
aaagaaagaggacgagaaagggcagtggccagtacagaagtgaagcagaaacttcaagag
ttcctgttaagtaaatcagctacaaaagactctccagcaaatgggaagaatcattccatg
agccgtcaccccaagctctggtacacggctgcccaccatacctcactggatcaaagctct
ccacccctgagtggggcctcgccaccatacaaatatactttaccaggagcacaggatgct
aaggatgattttccacttcgtaaaacggcttcagagcccaatttgaaggtacgttcaaga
ttaaaacaaaaggtgacagaaaggagaagcagtcctttgctcaggaggaaggatggaaac
gtcagttcattcaagaagcgtcttttcgaggtgacagaatcctcagtcagtagcagctcc
cctggatcaggtcccagttccccaagcaatggtccgaccagcagtgcaacagaaaatgaa
acctcagttttgccatctaacattcaagctgagcacctggtttcccagcaacgccttttg
atacaggatgaatcagtgaacttgttgagtctgtacacatccccttctctgcccaacatt
accttaggacttccagcaatacaacctcaaatcagtggagtcagggagtgctccaggaaa
agtattagcttcccactactacaggcttcgtcgtcattcaaagaaaagcagaagggggag
accccgccacttagacaaggagtggccttggctggacagtatggaggaaacattcctcca
tcatcaactcatcctcacattgctatggagggaaagccaaacagcagccaccaagctctc
ttgcagcatctgttactgaaagagcaaatgagacagcaaaaacttcttgtgactggagcg
gttcctcttcatccacagtctcctttagcagcaaaggagagagtctcacctggcataaga
gctgcccacaaactgcctcgtcacaggccactgaacagaacccagtctgctcctcttcct
cagagtactttggcccagctggtcatccagcagcaacatcagcaatttttggagaagcag
aaacagtaccagcagcagatccacatgaataagatgctttctaagtccattgagcagctt
aagcagcctggcagtcacctggaggaagctgaagaagagcttcatggagatcactcgatg
caggaagagcgagctcccgccagcagtgccagcgttagggctgagagcagcagtgctggt
gtggatgacagaataggacagcaggtgggggctgtgaaagtcaaagaggagccactggac
agtgatgaggatgttcaaacccagcaaatggaatctggggagcaagctgcttttatgcaa
caggagttcctggcacatcagcatgtccaccagttgcaaatctaccaggctcagatggct
acagttggcatggcaggatcagataaacatcgaccactttccaggaccccatcttccccc
actgactccacattacctcacccagacatggaccagcccagccagcatgtctacacaact
ggtgttgtatatgacagtctgatgctgaagcaccagtgcatgtgtgggaattatgccaat
caccctgaacacgctggaagaatccaaagcatctggtcaaggctgcaagaaactgggttg
ctaaacaagtgtgagcgaattcgaggtcgaaaagccagtctggaggaaatacagctggtt
cactctgaacatcattcactgctgtatggcaccagcccactgaacagacagaagctggac
cccaggaaactcctaggaaacgtgtctcaaaaactcttttccttgttgccttgtggggga
cttggggtggacagtgacaccgtttggaacgagctgcactcggccggggcggcacgcatg
gcggtgggctgtgtcatcgagctggcggcccgcgtggcctcccgggagctgaagaatggc
tttgctgttgtaaggcccccaggccatcatgctgaagaatcaacagccatggggttctgc
ttttttaattcgattgcaattactgccaaatacttgagagacaagctaaatataggcaag
atattgattgtagatctggatgttcaccatggcaacggtacacagcaggctttttatgct
gaccccagcatcctgtatgtttccctccatcgctatgatgaaggcaacttcttccccggc
agtggagccccaaatgaggttggaagtggccctggtgaagggtataacataaatattgct
tggacaggtggcttggatcctcctatgggtgatgttgagtatctcacagcattcaggact
gtgatcatgccagctgccaatgagtttgatccagaaattgtcctggtgtcagcaggattc
gatgctgtggaaggccatgaccctccgctgggcgggtacaaagtcacagctaaatgtttt
ggtcacctaaccaagcaattgctgaagctggcggacggccgcgtggtgctggcactggag
ggaggacatgacctcactgccatctgtgatgcctctgaagcctgtataaatgccctccta
ggaaatgagctggagcctctcccggaagatattgtgcaccaaatccccaatatgaatgca
atagcttctttaaaaaagaccactgaaattcaaagcaagtactggaagtcagtggagcca
tactctgtgccagtggattgtgctctggctgagtctcagaagcaagagagggaggagaca
gaaacagtatcagctatggcctctctttcagtggatgttgagcagtgtattcctcaggaa
ggcagcagagctgctggtgagcccatggaagaagagccagccttgtga
DBGET
integrated database retrieval system
