KEGG   Agelaius tricolor (tricolored blackbird): 139591118
Entry
139591118         CDS       T10815                                 
Symbol
RAB5A
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
atrc  Agelaius tricolor (tricolored blackbird)
Pathway
atrc04137  Mitophagy - animal
atrc04144  Endocytosis
atrc04145  Phagosome
atrc04148  Efferocytosis
atrc05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:atrc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    139591118 (RAB5A)
   04145 Phagosome
    139591118 (RAB5A)
   04137 Mitophagy - animal
    139591118 (RAB5A)
   04148 Efferocytosis
    139591118 (RAB5A)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    139591118 (RAB5A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:atrc04131]
    139591118 (RAB5A)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:atrc04147]
    139591118 (RAB5A)
   04031 GTP-binding proteins [BR:atrc04031]
    139591118 (RAB5A)
Membrane trafficking [BR:atrc04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    139591118 (RAB5A)
 Endosome - Lysosome transport
    139591118 (RAB5A)
Exosome [BR:atrc04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   139591118 (RAB5A)
  Exosomal proteins of other body fluids (saliva and urine)
   139591118 (RAB5A)
  Exosomal proteins of colorectal cancer cells
   139591118 (RAB5A)
  Exosomal proteins of bladder cancer cells
   139591118 (RAB5A)
GTP-binding proteins [BR:atrc04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    139591118 (RAB5A)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 139591118
NCBI-ProteinID: XP_071285432
LinkDB
Position
Unknown
AA seq 215 aa
MANRGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQ
TVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQR
QASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTSMNVNEIFMAIAKK
LPKNEPQNAGASSARGRGVDLTEPTQPPKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atggctaatcgaggagcgacaaggcccaacgggccaaatgctggaaataaaatttgccaa
tttaaactagtacttttaggagagtctgcagttggcaaatcaagtttggtgcttcgtttt
gtaaaaggacagtttcatgaatttcaagaaagtacaattggagctgcttttctaacccag
actgtatgtctggatgatacaacggtaaaatttgaaatttgggatacagctgggcaagag
cggtaccacagtttagcacccatgtactacagaggagcacaagcagctatagtggtatac
gacattacaaacgaggagtcctttgccagagcgaaaaattgggtcaaagaacttcagcga
caagcaagtcctaacattgtaatagctttagcaggaaacaaagctgatctagctaacaaa
agagctgtggatttccaggaagcacaggcttatgcagatgacaacagcctattgttcatg
gagacatctgccaaaacatctatgaacgtaaatgaaatattcatggcaattgcaaaaaaa
ttgcccaagaatgaaccacagaatgcaggagccagctctgccagaggaagaggagtagac
cttaccgaacccacacaaccacccaagagtcaatgttgtagtaactaa

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