Agelaius tricolor (tricolored blackbird): 139591221
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Entry
139591221 CDS
T10815
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42 isoform X1
KO
K12589
exosome complex component RRP42
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139591221 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139591221 (EXOSC7)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
139591221 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
139591221 (EXOSC7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
139591221
NCBI-ProteinID:
XP_071285702
LinkDB
All DBs
Position
Unknown
AA seq
324 aa
AA seq
DB search
MTTRSISVHQDISTASWRSFWQKAAALFLREGQLLGRDVFRDAGCPVGTASRAEDLRVDG
RGCEDYRCAEVETDVVSNTSGSARVKLGETDILVGIKAEMGTPKLEKPDEGYLEFFVDCS
SNSPELEGRGGEELGTDIANTLYRVFSCENSVDLKSLCINPKEHCWVLYVDVLLLECGGN
IFDAISIAVKAALFNTRIPKVRVLEDEEGTKEIELSDDPYDCIRLNVDEVPCIVTLSKIG
YRHVVDATLQEEACSLASLLISVTSKGAISSMKKVGKGSLDPESIFEMMETGQRVGKSLH
IALQKILDEEENLGTSRPKVGFLG
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgactacaagatccatttctgtgcaccaggatatttccacagcctcctggaggagcttt
tggcagaaagcggcagctttgtttttacgcgagggtcagcttcttggacgggacgttttc
cgggatgcggggtgcccagtgggtaccgcgtccagagcggaagaccttcgtgtagatggt
cgaggctgtgaagactacagatgtgcagaagtagaaacagatgttgtatcaaacacaagt
ggatctgcaagagtaaagctgggagaaactgatatcttggtaggcataaaagctgaaatg
gggacaccgaagttggagaaaccagatgaaggttacctggaattttttgttgactgttct
tcaaattctcctgagttggaaggccggggaggagaagagcttggcacagatatagcaaat
acactatacagagtattcagctgtgagaacagtgtagacttgaaatccctttgtattaat
cccaaagagcactgctgggttctctatgtggatgtattgttattggaatgtggtgggaac
atctttgatgcaatctctattgcagtgaaggcagctctctttaacacaagaatacccaaa
gtgcgtgttctggaggatgaggaaggtaccaaagagattgagctgtctgatgacccttat
gattgtattcgactcaacgtagatgaggtgccctgtattgtcacactaagcaaaattgga
tataggcacgtggtggatgctacccttcaggaagaagcctgttctttggcaagcctgctt
atttcagtgaccagtaaaggtgccatcagttctatgaagaaggtggggaaaggtagcctg
gatcctgagagtatttttgaaatgatggagacaggacaaagagtaggcaagtcacttcac
atagcccttcagaagattttggatgaagaagagaatttggggacttcacgaccaaaagtt
ggatttctaggatga
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integrated database retrieval system
