Agelaius tricolor (tricolored blackbird): 139591252
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Entry
139591252 CDS
T10815
Symbol
MLH1
Name
(RefSeq) DNA mismatch repair protein Mlh1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03430
Mismatch repair
atrc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139591252 (MLH1)
03460 Fanconi anemia pathway
139591252 (MLH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atrc03400
]
139591252 (MLH1)
DNA repair and recombination proteins [BR:
atrc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
139591252 (MLH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
139591252
NCBI-ProteinID:
XP_071285766
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MAGVIRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKFIQVQD
NGCGIRKEDLDIVCERFTTSKLQKFEDLASISTYGFRGEALASISHVAHVTVTTKTADAK
CAFRATYSDGKIKAPPKPCAGNQGTQITVEDLFYNVNTRRKALKNPNEEYAKILEVVSRY
AIHNSGISFSVKKQGDTVSDVRTLSNASTVDNIRAIFGNAVSRELIEVGCEDANLAFKMK
GYITNANYSVKKCIFLLFINHRLVESAAMRKAIETVYAAYLPKSTHPFLYLSLEIAPQNV
DVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSSRMYFTQTLLPGADCSSNEVVKSA
ANSSVVTKGSSDKVYAHQMVRTDSREQKLDAFLQPVNNPLSAGTTEVTAEVNAAPPEGAG
RPQDAEMEEVSDVVEMVDVQEDAVQPGGPSESGHLSPVPSRKRPREDMDVELEKDDTRKD
MTAACTPRRRIINLTSVLTLQEEISNQAHAKLQEMLHEHSFVGCVSPQWALAQYQTKLYL
LNTTKLSQELFYQILIYDFANFGVLRLSEPAPLYELSMLALEDPESGWTEEDGPKEGLAE
YIVEFLKKKTEMLKDYFSLEIDEEGNLTGLPLLIDNYVPPLEGLPMFILRLATEVNWDEE
KECFESLSKELAMFYSIRKQYIIEESNPTNSQSEESESGSTTWKWTVEHVLYKAFRTHLL
PPKHFAEDGNILQLANLPDLYKVFERC
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggccggcgtcatccggcggctggatgaggccgtggtgaaccgcatcgccgccggcgag
gtcatccagaggccggccaacgccatcaaggagatgatcgagaactgtttggatgctaag
tctacgagtatccaggtagtagttaaagaaggtggtctgaaattcatccaggttcaagat
aacggctgtggtatcagaaaagaagatcttgacatcgtatgtgagagatttactacgagt
aaactgcaaaaatttgaagacttggctagcatttctacatatggttttaggggtgaggcc
ttggctagcatcagtcatgttgcccatgttacagtaacaactaaaacagctgatgcaaag
tgtgcattcagagctacttacagtgatggaaaaatcaaagcccctccgaagccatgtgct
ggaaaccaaggaactcagatcacagttgaagatcttttttacaatgtaaatacaagaagg
aaggctttaaaaaatccaaatgaagaatatgcaaaaatactagaagttgttagcaggtat
gccatccataactcaggcatcagcttttcagttaaaaagcaaggtgacactgtgtcagat
gttagaaccttatccaatgcctcaacagtggacaacatcagggccatctttggaaatgct
gttagcagggaactcatagaagtgggctgtgaagatgcaaatctggcctttaaaatgaaa
ggttacatcacgaatgcaaactactctgtgaagaaatgtatatttttactcttcataaac
catcggttggtagagtcagccgctatgcgcaaagccatagaaactgtgtacgctgcttat
ttgccaaaaagcacgcacccattcctatacttaagcctggaaatagcccctcagaatgta
gatgtgaatgtgcatcctacaaaacacgaggtccattttcttcatgaagacagtattctg
gagcgtgtgcaacaacatgtagagagcaagttattgggctctaattcctcaaggatgtac
ttcactcagacattgcttccaggggctgactgctcttccaatgaggttgtaaaatcagca
gcaaactcttcagtggtcaccaagggaagcagtgataaagtttatgcacatcagatggtc
cgcactgattcccgagagcagaaattggatgcttttcttcagccagtgaacaaccccctg
agtgcaggcaccactgaagtgacagcagaggttaatgcagcacctccagagggtgcaggc
agaccccaggatgctgaaatggaagaagtcagtgacgtggttgaaatggttgatgttcag
gaggatgcagtgcagcctggggggccgagcgagagtggacacttgtctcctgtgccttct
cggaaaagaccacgggaagacatggatgtagaattggagaaagatgacaccagaaaggac
atgactgctgcctgcacccctagaagaagaattatcaacttgaccagtgtgttgactctc
caggaggaaattagtaaccaagcacatgcaaaactccaggagatgctacatgagcactca
tttgttggctgtgtcagtcctcagtgggctctggcccagtaccagacaaaactgtacctt
ctcaatacaacaaaactcagccaagaactcttctaccagatacttatttatgattttgca
aactttggagtcttaaggttgtctgagccagctcctttatatgagctttcaatgcttgct
ttagaggatcctgaaagtggctggacagaagaagatggcccaaaagaagggcttgctgag
tacattgtggaatttttgaaaaaaaagactgaaatgttgaaagattatttctctcttgaa
attgatgaggaaggaaatcttactgggttaccacttctgatagacaactatgtcccacca
ctggaaggactgcctatgtttatcctgcgcttggccacagaggtaaactgggatgaagaa
aaggagtgttttgaaagcctgagtaaagaactagccatgttctactccatcagaaagcag
tatataatagaggaatccaatccaacaaactctcagagcgaagaatctgaatctggttca
acaacatggaaatggacagtggaacatgtgctttacaaagcttttaggactcatctttta
cctcctaaacactttgcagaagatggcaacattttgcagcttgctaacctgcctgacctg
tataaagtttttgaaagatgttga
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