Agelaius tricolor (tricolored blackbird): 139591452
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Entry
139591452 CDS
T10815
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03013
Nucleocytoplasmic transport
atrc05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139591452 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
139591452 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atrc03019
]
139591452 (NUP98)
03036 Chromosome and associated proteins [BR:
atrc03036
]
139591452 (NUP98)
Messenger RNA biogenesis [BR:
atrc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
139591452 (NUP98)
Chromosome and associated proteins [BR:
atrc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
139591452 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
139591452
NCBI-ProteinID:
XP_071286106
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MFNKSFGTPFGGSTGFGTTSTFGQNAGFGTTSGGAFGTSAFGSSNNTGSLFGSTQSKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVST
NINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTNTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGATTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLNSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEREEEEEAHEVTRFYTNPIAKPIPQSLE
GSGHKPHAGVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQEEWDKEIEPGLQQHPAGI
VLTRAGYYTIPTLEELARLTNDRKECIVTDFTIGRTGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDEKKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEMDYEGRLEA
VSRRQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPLKVDIKKLKTTPVPPPGH
LPPQQMALNGKPAPPAQPLELEQLGRLVELDSDMADVTQEPAQEPLAEDALAEEQEAVPA
STHIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKQPVKIDTSQEICSPRLPISKSQ
GQKRHSAAGLLQSKFASVLSQAPSAAVADAKGPRTLDSAPSAALWSPLASAFTVPAAVPE
VQVKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQLSGC
GEAEDAQVEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKMDRDKELYLTPLEIKLK
HSTVHMDEPCPLLAPNPGVSAIHDYADWARKASEDPTVAESVVKHWCLAWTLCEAIWGKL
RELEASLEEPSEYVLALERRRAFSRWLSETAAARIEEEVAMARHGSHVEAVFSCLTGKRI
GEACRLAQQAGDHRLALLLSQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFALLA
GKPVWQLSERISVNVCSLLDWKRCMAVHLWYLLPPTASISRALAMYESAFQNTSECEKYA
CCPLPPYLEDSGYVIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPLDFR
LSWHLWEVLRALNYCHLSQQSWGVLNTSYAAQLESEGLWEWAVFVMLHEPDAHVREKAVR
ELLGRHCALAEGPEGWAKESFLTQRLCVPPRWIHEAKAVRARMEGDKHKEALFLFKAGHW
NQCHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVNEML
DRIQQLDVSTYELERLHTKVTSLCNRIEQLQCHTAKDRLAQSDMAKRVANVLRAVLSLQQ
GPEAGPEPAEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaatcctttggcactccatttggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgctggctttggcaccaccagcggaggggccttcgggacctcggcc
tttggctccagcaacaacaccggcagcctgttcgggagcacgcagagcaagccaggaggg
ttgtttgggtctactacattcaaccaaccagccacctcctccaccagcactggctttggc
tttggaacatccactgggacatcaaacagcctctttggaaccaccagcactggtggaagc
ctgttttcatcccagaataatgcctttgcacagaacaaaccagctggctttggaaacttt
ggtacaagcaccagcagtggggggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagcttcactgcagctccaactggcacg
actattaaatttaatcccccaaccggcaccgacaccatggtgaaatccggcgtcagcacc
aacatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaagtccctc
gaggaactccgtttggaagactaccaggctaataggaaagggcccacgaatcctgtagga
gcaggagcaactgctggcttgtttggctcttccactgccacgtccagcacagccacagga
ctttttggctcttccactaccaatacaggcttctcctatgggcagaataaaactgctttt
ggaaccagtacgaccggctttggcacgggcaccaccggggggctctttgggcagcagtcc
cagaccacgagcctgttcaacaaaccctttggccaggccaccaccacgcagaacaccggc
ttctcctttgggggcaccagcaccctgggccagcccaacaccaacaccatgggtctcttt
ggggtcacccagccctcgcagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacgggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggagccaccacgaccagcgct
ccctcgttcggtaccaccacgggcgggggcctcttcggttttggtgccaacactgctgga
aatagcttgtttggaaataagcctgcgactgggactctgggcactggacttggaacaggg
tttggaacagctctgggggcaggacagacatccctgtttgggaacacgcagccaaagctg
gggggaacgctgggaacaggagcgttcggagcgccaggattcaacacatccacagccacc
ctgggctttggggcccctcagcctgctgtagctctgacagaccccaacgcctctgcagcc
cagcaagctgtcctccagcagcacctcaacagcctgacctactccccctttggggactcc
ccactcttcagaaaccccatgtcagacccaaagaagaaggaggagaggctgaagccaacc
aacccagcagcccagaaggccctgacgacccccacccactacaagctgaccccccgccct
gccaccagagtgcggcccaaggccctgcagtcagcgggctcagccaagtcccagctcttt
gatgggctggatgatgatgagccctccctgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcaacagcagcaacctgttctctcccgtgagccga
gagaacgaggacctggcgtcgccgtcagagtacccggagaatggggacaggttctttctg
tcggtgcctcccgaggagaaccacaggcaggacggggagcgggaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaaccccattgccaagcccatcccacagagcctggag
ggcagcgggcacaagccccacgcgggcgtggacgacaccatcgtggcgctgaacatgcgc
gcggcgctgcgcaacggcctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggaggagtgggacaaggagatcgagcctggcctccagcagcatcctgcagggatt
gtcctgacacgagctggctactacaccatcccgaccctggaggagctggcccggctgacc
aacgacaggaaggaatgtatcgtgacagacttcaccatcggccgcacgggttatggatca
atttacttcgaaggagaagtaaatctaacaaacttaaacctggatgagattgtacatatc
cggagaaaagaagttattgtttaccctgacgacgaaaaaaaacctcccattggggaaggg
ttaaataggcgggctgaggtgaccctggacggggtgtggcccacggacaagacgtcgcgg
tgcctgatcaagagccccgagcggctggccgagatggactacgagggccggctggaggcc
gtgtcccgccggcagggcgcgcgcttcaaggagtaccgccctgagaccggctcctgggtc
ttcaaggtagcacacttttccaagtatggcttgcaagattctgacgaggaggaggaagat
catcctttaaaagtggacatcaagaagttaaagaccacacctgtgccacccccagggcac
ctgccaccccagcagatggccctgaacggcaaaccagcgcccccggctcagcccctggag
ctggagcagctgggcaggctggtggagctggacagtgacatggcagacgtcacccaggag
ccagcccaggagcccttggcagaggatgccctggccgaggagcaggaggcagtgccagcg
tccacgcacatcgcgtccacccagggcatcaacccctacgtgctgcagatcatgaaagct
tccttgcttgctgatgatgacgacctggatttgatcctggattatcctgggaagcaacct
gtcaagatagacacttcccaagagatctgctccccaaggcttcccatttcaaaatcacaa
ggacagaaaagacactcagctgctgggctgctgcaatccaagtttgccagtgtcctttcc
caagcaccgagtgctgccgtggcagatgccaagggccccaggactttggacagtgccccc
tctgctgctctgtggtcaccgctggcctcggccttcacggtgcccgcggccgtgcccgag
gtgcaggtgaagacagtgggggcccgcaggcagcgcgggctcgtccccctggagagatcc
atcacctatgggaaggggaagctcctgatggacatgggactcttcatgggccgctccttc
cgcgtgggctggggccccaactggacgctggtcaattgtggagatcagctgagcggctgc
ggtgaagcggaagacgctcaggtggagcccgtggaatatggattcctgcccactcccgtg
gctcccaaatcactcacagaatctcctttcaaagttcatgtggaaaagttgagcttggaa
caatggaagatggacagagacaaggagctgtatctcacccctctggagataaagctgaag
cacagcactgtccatatggatgagccctgtcctctcctggcccccaaccccggagtctct
gctatccatgactatgctgactgggccaggaaagcatctgaggatcccactgtggcagag
agcgttgtgaagcactggtgcctggcctggacgttgtgtgaggccatctggggcaagctg
agggagctggaggccagcctggaggagcccagcgagtacgtgctggcgctggagcggcgc
cgcgccttctcgcggtggctgtcggagacggcggccgcgcgcatcgaggaggaggtggcc
atggcccggcacggcagccacgtcgaggccgtgttcagctgcctcacgggcaagaggatc
ggcgaggcctgcaggctggcacagcaggcaggtgaccaccgcctggcgctgctgctgtca
cagctggccggcagccagcccgtgagggacctgctgaccctgcagctggtggactggcac
cgcctgcacagcgaccgcttcatccaggaggagcggctgcgcctcttcgccctgctcgcg
ggcaagccggtgtggcagctctccgagaggatcagtgtcaacgtgtgctcgctgctggac
tggaagcgctgcatggccgtgcacctctggtacctgctgccccccacagcctccatctcc
agggctctggccatgtacgagtcagcctttcagaacacctcagagtgtgaaaaatacgcc
tgctgtcctctgcctccttacctggaggattctggctatgtcattgaggaagatgacaat
ggaggaaggcccctgagagatgtctgcttccatttgttaaagctctacagtgacaggtcc
tacgagcttgaccagctgctggatcccaggagtgtcacctctgacccgctggatttccgc
ctcagctggcacctgtgggaggtgctcagggccctgaactactgccacctgtcccagcag
agctggggggtgctcaacaccagctatgctgcccagctggagagcgaggggctgtgggag
tgggccgtgttcgtgatgctgcacgagcctgacgcacatgtccgtgagaaggcggtgcgg
gagctgctgggccggcactgcgcgctggccgagggccccgagggctgggccaaggagagc
ttcctgacgcagcgcctgtgcgtgcccccgcgctggatccacgaggccaaggccgtccgg
gccaggatggagggagacaagcacaaagaggccctgttcctcttcaaggctggccactgg
aaccagtgccacaagctggtcgtcaggcacttggcctcagatgcaattatcaacgagaac
tacaagtacctgaaggggttcctggaggacctggcgccgccggagcgcagcgcgctcatc
caggactgggagctggcggggctggtctacctcgactacatccgtgtcaacgagatgctg
gacaggattcagcagctggatgtttccacctacgagctggagcggttacacaccaaagtg
acgtccctgtgcaacaggatagagcagctgcagtgccacacggccaaggaccgcctggct
cagtcagacatggcgaagcgcgtggccaacgtgctgcgggcggtgctgagcctgcagcag
ggccccgaggcgggccccgagcccgcggagccgcgcgtgcccctgcgcctgctggccccg
cacatcggccgcctgcccatgcccgaggactacgcgctggaggagctgcgcggcctcacc
caggcctacctgcgcgagctggccctggccgcgcactga
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integrated database retrieval system
