Agelaius tricolor (tricolored blackbird): 139591517
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Entry
139591517 CDS
T10815
Symbol
DSCAM
Name
(RefSeq) cell adhesion molecule DSCAM isoform X1
KO
K06767
Down syndrome cell adhesion molecule
Organism
atrc Agelaius tricolor (tricolored blackbird)
Brite
Cell adhesion molecules [BR:
atrc04515
]
Immunoglobulin superfamily
DSCAM family
139591517 (DSCAM)
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GFIT
Other DBs
NCBI-GeneID:
139591517
NCBI-ProteinID:
XP_071286262
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Position
Unknown
AA seq
2009 aa
AA seq
DB search
MWMLAVALLHSISHVFSEELHASLYFVNASLQEVVFASTTGTLVPCPAAGIPPVTLRWYL
ATGEEIYDVPGIRHVHPNGTLQIFPFPPSSFNNLIHDNTYYCTAENPSGKIRSQDVHIKA
VLREPYTVRVEDQKAMRGNVAVFKCIIPSSVEAYITVVSWEKDTVSLVSGPRFLITSTGA
LYILDVQNEDGLYNYRCITRHRYTGETRQSNSARLFVSDPANSAPSILDGFEHRKAMAGQ
RVELPCKASGHPAPKYRWLKDNVPWEPDSRFRQTVTGLLIENTRPSDSGSYVCEVWNNYG
TAEVIGRLHVTQPLKATISPRKVKSSVGSQVSLSCSVTGTEDQELSWYRNGEIINPGSNV
RITGVNRENLIMDGMAKSDGGAYQCFVRKDKMSAQDYVQVVLEDGTPKIISAFSEKVVSP
GEPVSLMCNVKGTPLPTITWTLDEDPIVKDGSHRISQIITSEGNVVSYLNISNTQVRDGG
VYRCTANNSAGVVLYQARINVRGPASIRPMKNITAIAGRDTYIHCRVIGYPYYSIKWYKN
SNLLPFNHRQVAFENNGTLKLSDVQKEVDEGEYTCNVLVQPQLSTSQSVHVTVKVPPFIQ
PFEFPRFSIGQRVFIPCVVVSGDLPITITWQKDGRPIPASLGVTIDNIDFTSSLRISNLS
LMHNGNYTCIARNDAAAVEHQSQLIVRVPPRFVVQPSDQDGIYGKAVILNCSAEGYPVPT
IVWKYSKGAGVPQFQPIALNGRIQLLTNGSLLIKHVLEEDSGYYLCKVSNDVGADVSKSM
YLTVKIPAMITSYPNTTLATQGQKKEMSCTAHGEKPIIVRWEKEDRIINPEMSRYLVSTK
EVGDEVISTLQILPTVREDSGFFSCHAINSYGEDRGIIQLTVQEPPDPPEIEIREVRARS
IALRWTMGFDGNSPITGYDIECKNKSDSWDSVQRTRDVSPQLNQATIIDLHPSSTYNIRM
YAKNRIGKSEASNELTITTDEAAPDGPPQDVQLEPISSQSIRVTWKAPKKHLQNGIIRGY
QIGYREYSAGGNFQFNIISIDTTGDSEVYTLNNLKKFTQYGMVVQACNRAGIGPSSQEII
TTTLEDVPSCPPGNVQATATSPETISISWSTLAKETLNGILQGFRVIYWANLLDGELGEI
KNVTTTQPSLELDGLEKYTNYSIQVLAFTRAGDGVRSEQIFTRTKEDVPGPPAGVKAAAA
SASTVFVSWLPPLKLNGIIRKYTVFCSHPYPTVISEFEASPDSFSYRIPNLSRNRQYSVW
VVAVTAAGRGNSSEIITVEPLAKAPARILTFSGTVTTPWMKDIVLPCKAVGDPAPTVKWM
KDSNGTPSLVMIDGRRSIFSNGSFVIRTVKAEDSGYYSCVASNNWGSDEIILNLQVQVPP
DQPRLTVSKTTSSSITLSWIPGDNGGSSIRGYILQYSEDNSEQWGSFPISPSERSYRLET
LKCGTWYKFTLTAQNGVGPGRISEIIEAKTLGKEPQFSKEQELFASINTTRVRLNLIGWN
DGGCPITSFTLEYRPFGTTVWTTAQRTSLSKSYILYDLQEATWYELQMRVCNSAGCAEKQ
AKFATLNYDGSTIPPLIKSVVQSEEGLGTNEGLKMLVTISCILVGVLLLFVMLLIVRRRR
REQRLKRLRDAKSLAEMLMSKNTRTSDTLNKQQQTLRMHIDIPRAQLLIEERDTMETIDD
RSTVLLTDADFGETSKQKSLTVTHTVHYQSVSQATGPLVDVSDARPGTNPTTRRSAKTGP
TARNRYASQWTLNRPHPTISAHTLTTDWRLPTPRPAGSVDKESDSYSVSPSQDTDRARSS
MVSTESASSTYEELARAYEHAKMEEQLRHAKFTITECFISDTSSEQLTAGTNDYTDSLTS
STPSESGICRFTASPPKPQDGGRVMNMAVPKAHRPGDLMHLPPYLRMDFLLNRGVQGTSR
DLGLGQACLEPQKSRTLKRPTVLEPIPMETSSTRDVQSWQPGAVATLPQREGAELGQAQA
KMSSSQESLLDSRGHLKGNNPYAKSYTLV
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgttggccgtcgccttgctccacagcatctcgcatgttttcagtgaagagcta
cacgccagtctctactttgtcaatgcatctctgcaagaggtagtgtttgctagcaccaca
gggactctggtcccctgtccagcagcggggatccccccggtgacgctcagatggtaccta
gcgacgggcgaggagatctacgatgtcccagggatccgccacgtccaccccaatggcact
ctccaaatcttccccttccctccttcaagctttaataacttaatccatgataacacttac
tattgcacagctgaaaatccttcagggaaaatcaggagtcaggatgttcacattaaggct
gttttacgggaaccctatacagtccgtgtggaggaccagaaagccatgagaggcaatgta
gcagtgttcaagtgcattatcccctcctctgtggaggcatacatcactgttgtctcatgg
gagaaagacacagtctcgcttgtctcaggacctagatttctcatcacatccacgggagcc
ttgtatattttagatgtacaaaacgaagatggactgtacaactaccgctgcatcaccagg
cacagatacaccggagaaacgcgacagagcaacagcgccagactttttgtatcagaccca
gcgaattcagctccatctatcctagatgggtttgagcaccgcaaagccatggcaggacag
cgagtggagctgccttgcaaagcatcagggcacccggcaccaaagtaccgctggctgaag
gacaacgtgccctgggagcccgacagccgcttccggcagacggtgacggggctgctcatc
gagaacacgcggccctcggactcgggcagctacgtctgcgaggtgtggaacaactacggc
accgccgaggtcatcggccgcctgcacgtcacacaaccgctaaaagccaccatcagcccg
cgcaaggtcaaaagcagcgtcggcagccaagtgtccttgtcctgcagcgtgacagggacc
gaggaccaggagctgtcctggtaccgcaacggggaaatcatcaaccctggcagcaacgtg
cgcatcaccggggtcaaccgcgagaacctgatcatggacggcatggccaagagcgacggc
ggcgcctaccagtgcttcgtgcgcaaggacaagatgtcagcccaagactatgtccaggtg
gtgctggaagacggaactcccaaaatcatctctgccttcagcgagaaagtggtgagccca
ggagagccagtgtccctgatgtgcaacgtgaaggggactcctctgcccaccatcacctgg
acactggatgaggaccccatcgtgaaggatggcagccacaggatcagccagatcatcacc
tctgagggcaacgtggtcagttacctgaacatctccaacacccaggtccgggacgggggc
gtttatcgctgcactgccaacaactctgcgggagtcgtcctgtaccaggctcgaataaac
gtaagagggccagcgagcatccggcccatgaagaacatcacggccatcgctggcagggac
acctacatccactgcagggtcatcgggtacccctactactccatcaagtggtacaagaac
tccaacctgctgcccttcaaccatcgccaagtggcgttcgagaacaacggcacgctgaag
ctctcggacgtgcagaaggaggtggacgagggcgagtacacctgcaacgtcctggtccag
ccccagctgtccaccagccagagcgtgcacgtgacagtgaaagtcccacctttcatccaa
cctttcgagttccctcgcttctccatcgggcagagggtgttcatcccctgcgtggtggtc
tcgggggacctgcccatcaccatcacctggcagaaggacggccggcccatccccgccagc
ctgggcgtcaccatcgacaacatcgacttcaccagctccctgaggatctccaacctgtcc
ctgatgcacaacgggaactacacctgcatcgccaggaacgatgcagcagctgtggagcac
cagagccaattaatcgtcagagtgccccccaggtttgtggtccagcccagcgaccaggac
gggatctatgggaaagccgtcatcctcaactgctctgccgagggctatcccgttcctacc
attgtctggaagtactccaaaggtgccggggttccccagttccagccgatcgcgctgaac
ggtcgcatccagctgctcacaaacggctccttgctgatcaaacatgtgctggaagaagac
agtggatactacctctgcaaggtcagcaatgatgtgggagcagacgtcagcaagtccatg
tacctcactgttaaaattccagctatgataacctcctacccaaacaccaccctggcaact
caaggccagaagaaggagatgagctgcacggctcatggagagaaacccatcatcgtccgc
tgggagaaggaagaccggatcattaaccccgagatgtcccgttacctggtttccaccaag
gaagttggggatgaagtgatttctaccctgcagattctgccaactgtgcgtgaagattct
ggcttcttttcctgccatgccatcaattcttatggggaggatcgtggaataattcagctc
actgtgcaagagccccccgacccccctgagatagagatccgggaggtgagagctcggagc
atcgcgctcaggtggaccatgggcttcgatggcaacagccccatcaccggctacgacatc
gagtgcaagaacaagtcagactcttgggattctgtccagagaaccagagatgtttcccct
cagctaaaccaagccaccatcatcgacctgcacccgtcctccacctacaacatccgcatg
tacgccaagaaccgcatcggcaagagcgaggccagcaacgagctcaccatcaccactgat
gaagcagcccctgatggtccacctcaggatgtgcagcttgagcccatatcttcccagagc
atcagagtcacctggaaggctccaaagaagcacttgcagaatggaatcatccgtgggtac
cagataggatatcgggagtacagcgcggggggaaatttccagttcaacatcatcagcatt
gacaccactggggacagtgaggtttataccctgaataacctgaaaaaattcacccagtat
ggcatggtggtgcaggcctgtaaccgggctgggattggaccttcttctcaggaaatcatc
accacaactcttgaagacgtgcccagttgccctccagggaatgtgcaagccactgccacg
tccccagaaaccatctccatttcctggtcaacactggcaaaggaaaccctgaatgggatc
ctgcagggattcagggttatctactgggccaacctcttggatggagagctgggagagata
aagaatgtcactacaacccagccatccctggagctggatggcctggaaaaatacaccaac
tacagcatccaggtgttggctttcacccgagctggggatggagtgaggagcgagcagatt
ttcacccgcactaaggaggatgttccaggtcctcctgctggagttaaagcagctgccgcc
tcggcctccacggtttttgtgtcctggctgcctcccctgaagctgaacggcatcatcagg
aaatacaccgtgttctgctcccacccctaccccacagtgatcagcgagtttgaagcctct
cccgactcattttcctacagaatccccaacctgagccggaaccgccagtacagcgtgtgg
gtggtggccgtgacggctgcggggagaggcaacagcagcgagatcatcaccgtggagcca
ctggccaaagctcctgcccggattctgacgttcagcgggacggtgacaaccccctggatg
aaggacattgtcctcccctgcaaagctgtgggggaccctgctccaacagtcaagtggatg
aaggatagtaacgggacacccagtctagtgatgattgatgggcgaaggagcatcttcagc
aatggcagctttgtcatcaggactgtgaaggcagaagactctggctactacagctgtgtg
gccagcaacaactggggctcagatgaaatcattttgaatttgcaggtacaagttccacca
gaccagccaagactcactgtatccaaaactacatcttcctctatcactctttcctggata
cctggagacaatgggggcagttctatccgaggttatatcctgcagtactcagaggataac
agtgagcagtggggcagtttccccatcagccccagtgagagatcctacaggctggaaacc
ctgaaatgtggcacctggtacaagttcaccctgactgcccagaacggggtggggccgggg
cgcatcagcgagatcatcgaggccaagacgctcggcaaagagccacagttttccaaggag
caagagctctttgccagcatcaacaccacgcgggtgaggctgaacctgatcggctggaac
gacggcggctgccccatcacctccttcaccctggagtaccggccctttgggaccacggtc
tggaccacggcccagaggacatccctgtccaagtcctacatcctctatgacctccaggag
gccacctggtacgagctgcagatgagggtgtgcaacagtgctggctgtgcagagaaacaa
gccaagtttgccacgctcaattacgatggcagtacaatccctcctctcatcaagtcggtg
gtgcagagtgaggaagggctgggcaccaacgaagggctgaagatgctggtgaccatctcc
tgcatcttggtgggggtcctgctgctctttgtgatgctgctgatcgtcaggaggaggagg
agggagcagaggctgaagaggctgcgagatgcaaagagtttggccgaaatgcttatgagc
aagaacaccaggacatcagacacgcttaacaagcagcagcaaacactgaggatgcacata
gacattcccagagcccagctgctgatagaggagagggacaccatggagaccattgatgac
aggtccacggttctgctcactgatgctgactttggagagacgtccaagcagaagtccctg
actgtcacccacactgtccattaccagtcggtgtcacaagccacagggccactggtggat
gtctctgatgcccggccaggaacaaatcccaccacgaggaggagtgccaaaaccggcccc
accgcgcgcaaccgctacgccagccagtggaccctcaacagaccccaccccaccatatca
gcccacaccctcaccacagactggaggctgcccacgcccaggccagcaggatccgtggac
aaggaaagtgacagctacagtgtcagcccctcgcaggacacagaccgggcgaggagcagc
atggtctccacagaaagtgcctcctccacctacgaagagctggccagggcctacgagcac
gccaagatggaagagcagctgaggcacgccaagttcaccatcacagagtgcttcatatca
gacacgtcctcagagcagctcacggcagggaccaacgactacacggacagcctgacgtcc
agcacgccctccgagtcgggcatctgcaggttcactgcctccccccccaagcctcaggac
ggagggagggtgatgaacatggcggttcccaaggcacatcgcccaggtgatctcatgcat
ttgccaccctaccttaggatggactttttattgaaccgtggcgtgcagggcacgagcaga
gacctgggtttggggcaagcctgcttggagccacagaaaagccgaaccttgaagcgtccc
accgtgctggagccgatccccatggagacatcctccacgagagatgtccagtcatggcaa
cctggtgctgtggcaacgttacctcagcgagaaggagctgagctaggacaggctcaagca
aaaatgagcagctcccaagaatccctgctggactcccggggccacttgaaaggaaacaat
ccctacgcaaagtcttacaccctggtataa
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