Agelaius tricolor (tricolored blackbird): 139591545
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Entry
139591545 CDS
T10815
Symbol
U2AF1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit isoform X1
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
atrc Agelaius tricolor (tricolored blackbird)
Pathway
atrc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atrc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139591545 (U2AF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
atrc03041
]
139591545 (U2AF1)
Spliceosome [BR:
atrc03041
]
Complex A
U2 snRNP components
U2 related factors
139591545 (U2AF1)
Complex B
139591545 (U2AF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
139591545
NCBI-ProteinID:
XP_071286326
LinkDB
All DBs
Position
Unknown
AA seq
237 aa
AA seq
DB search
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTILIQNIYRNPQNSAQ
TADGSHCAVSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRRE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKKHRSRSRSRERRSRSRDRGRGGGGGGGGGRERDRRRSRDRERSGRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtacctggcctccatcttcggcaccgagaaggacaaagtcaactgctcattt
tatttcaaaattggagcttgtcgccatggagacagatgttctcggttgcacaacaaacca
acatttagccagaccatcttgattcaaaacatctatcgtaacccccaaaacagtgcacag
acggctgacggctcacactgtgctgtgagcgatgttgagatgcaggaacattatgatgag
ttctttgaggaggtcttcacagaaatggaggagaaatacggcgaagttgaggagatgaac
gtgtgtgataaccttggagatcacctagttggaaatgtatacgtcaagttccgccgtgag
gaagatgccgagaaggccgtgatcgacctgaacaatcgctggttcaacgggcagcccatc
catgccgagctctcccctgtgactgacttcagagaggcctgctgccgtcaatatgagatg
ggagagtgtacacgaggaggtttctgcaactttatgcatttgaagcccatttctcgagag
ttaaggcgcgagttgtacgggcggcgtcgtaaaaagcatcgatccaggtcgaggtcccgt
gagcgccggtctcgatccagagatcgcggccgtggcggcggcggaggaggaggcggcggc
cgcgagcgtgacaggaggcggtcaagggatcgcgaacgatccggtcgattctga
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